RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 OR10R2Q8NGX6 335 aa12.45□□□□□ -0.42
RTFDC1-201ENST00000023939 CPNE2Q96FN4 548 aaPredicted RBP12.45□□□□□ -0.42
RTFDC1-201ENST00000023939 MED30Q96HR3 178 aa12.45□□□□□ -0.42
RTFDC1-201ENST00000023939 SPACA5Q96QH8 159 aa12.45□□□□□ -0.42
RTFDC1-201ENST00000023939 GPER1Q99527 375 aa12.45□□□□□ -0.42
RTFDC1-201ENST00000023939 MYEF2Q9P2K5 600 aaKnown RBP12.45□□□□□ -0.42
RTFDC1-201ENST00000023939 CNOT1A5YKK6 2376 aaKnown RBP12.44□□□□□ -0.42
RTFDC1-201ENST00000023939 FAM3AP98173 230 aa12.44□□□□□ -0.42
RTFDC1-201ENST00000023939 GUSBP1Q15486 140 aa12.44□□□□□ -0.42
RTFDC1-201ENST00000023939 TMEM53Q6P2H8 277 aa12.44□□□□□ -0.42
RTFDC1-201ENST00000023939 OR4C16Q8NGL9 310 aa12.44□□□□□ -0.42
RTFDC1-201ENST00000023939 OR2AE1Q8NHA4 323 aa12.44□□□□□ -0.42
RTFDC1-201ENST00000023939 SARAFQ96BY9 339 aa12.44□□□□□ -0.42
RTFDC1-201ENST00000023939 TECTBQ96PL2 329 aa12.44□□□□□ -0.42
RTFDC1-201ENST00000023939 CST11Q9H112 138 aa12.44□□□□□ -0.42
RTFDC1-201ENST00000023939 PRSS50Q9UI38 385 aa12.44□□□□□ -0.42
RTFDC1-201ENST00000023939 MUC6Q6W4X9 2439 aa12.44□□□□□ -0.42
RTFDC1-201ENST00000023939 DNAJC13O75165 2243 aa12.44□□□□□ -0.42
RTFDC1-201ENST00000023939 LOC100509620A0A075B734 347 aa12.43□□□□□ -0.42
RTFDC1-201ENST00000023939 A0A1B0GUH1 482 aa12.43□□□□□ -0.42
RTFDC1-201ENST00000023939 ICMTO60725 284 aa12.43□□□□□ -0.42
RTFDC1-201ENST00000023939 IL18BPO95998 194 aa12.43□□□□□ -0.42
RTFDC1-201ENST00000023939 HLA-HP01893 362 aa12.43□□□□□ -0.42
RTFDC1-201ENST00000023939 CD74P04233 296 aa12.43□□□□□ -0.42
RTFDC1-201ENST00000023939 GSTP1P09211 210 aaKnown RBP12.43□□□□□ -0.42
RTFDC1-201ENST00000023939 GTF2F2P13984 249 aa12.43□□□□□ -0.42
RTFDC1-201ENST00000023939 EDN3P14138 238 aa12.43□□□□□ -0.42
RTFDC1-201ENST00000023939 RCVRNP35243 200 aa12.43□□□□□ -0.42
RTFDC1-201ENST00000023939 ZNF169Q14929 603 aaPredicted RBP12.43□□□□□ -0.42
RTFDC1-201ENST00000023939 CNN3Q15417 329 aaKnown RBP12.43□□□□□ -0.42
RTFDC1-201ENST00000023939 ZFP69Q49AA0 526 aa12.43□□□□□ -0.42
RTFDC1-201ENST00000023939 CDNFQ49AH0 187 aa12.43□□□□□ -0.42
RTFDC1-201ENST00000023939 CLVS2Q5SYC1 327 aa12.43□□□□□ -0.42
RTFDC1-201ENST00000023939 CD276Q5ZPR3 534 aa12.43□□□□□ -0.42
RTFDC1-201ENST00000023939 Q6ZTK2 550 aa12.43□□□□□ -0.42
RTFDC1-201ENST00000023939 GABRG1Q8N1C3 465 aa12.43□□□□□ -0.42
RTFDC1-201ENST00000023939 ZBTB8BQ8NAP8 495 aaPredicted RBP12.43□□□□□ -0.42
RTFDC1-201ENST00000023939 TMEM104Q8NE00 496 aa12.43□□□□□ -0.42
RTFDC1-201ENST00000023939 OR1K1Q8NGR3 316 aa12.43□□□□□ -0.42
RTFDC1-201ENST00000023939 BCL2L2Q92843 193 aaPredicted RBP12.43□□□□□ -0.42
RTFDC1-201ENST00000023939 URM1Q9BTM9 101 aaKnown RBP12.43□□□□□ -0.42
RTFDC1-201ENST00000023939 TMEM59Q9BXS4 323 aa12.43□□□□□ -0.42
RTFDC1-201ENST00000023939 OR51J1Q9H342 316 aa12.43□□□□□ -0.42
RTFDC1-201ENST00000023939 RANGRFQ9HD47 186 aaPredicted RBP12.43□□□□□ -0.42
RTFDC1-201ENST00000023939 MCUBQ9NWR8 336 aa12.43□□□□□ -0.42
RTFDC1-201ENST00000023939 ING3Q9NXR8 418 aa12.43□□□□□ -0.42
RTFDC1-201ENST00000023939 A0A096LPE4 126 aa12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 A0A1W2PPZ6 126 aa12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 TMEM235A6NFC5 223 aa12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 CNOT4O95628 575 aaKnown RBP12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 EIF2S3P41091 472 aaKnown RBP12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 ZP1P60852 638 aa12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 RPS27AP62979 156 aaKnown RBP12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 ZNF92Q03936 586 aa12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 RBMS2Q15434 407 aaKnown RBP12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 LINC00303Q3SY05 128 aa12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 C9orf135Q5VTT2 229 aa12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 STEAP1BQ6NZ63 245 aa12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 P4HA3Q7Z4N8 544 aa12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 LIX1LQ8IVB5 337 aa12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 OR56B1Q8NGI3 324 aa12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 GIMAP1Q8WWP7 306 aa12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 GAL3ST1Q99999 423 aa12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 TM2D1Q9BX74 207 aa12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 MED28Q9H204 178 aa12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 NOX3Q9HBY0 568 aa12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 A0A0A6YYD4 124 aa12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 ZNF503-AS2A6NEH8 195 aa12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 MPIG6BO95866 241 aa12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 IL5P05113 134 aa12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 SERPINA5P05154 406 aa12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 STOMP27105 288 aa12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 VEGFCP49767 419 aa12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 RAB1AP62820 205 aa12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 KCNJ8Q15842 424 aa12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 PNLIPRP3Q17RR3 467 aa12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 RSPO4Q2I0M5 234 aaPredicted RBP12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 ASCL4Q6XD76 172 aa12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 Q6ZS92 163 aa12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 STEAP2Q8NFT2 490 aa12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 TNFAIP8L1Q8WVP5 186 aa12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 NANOS1Q8WY41 292 aaKnown RBP12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 WNT2BQ93097 391 aa12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 APOBEC3DQ96AK3 386 aaPredicted RBP12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 RNF170Q96K19 258 aa12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 POM121L2Q96KW2 1035 aa12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 NPDC1Q9NQX5 325 aaPredicted RBP12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 GPR173Q9NS66 373 aa12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 KLK13Q9UKR3 277 aa12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 ANAPC10Q9UM13 185 aa12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 ZNF292O60281 2723 aa12.42□□□□□ -0.42
RTFDC1-201ENST00000023939 ZNF816-ZNF321PA0A0X1KG74 233 aa12.41□□□□□ -0.42
RTFDC1-201ENST00000023939 OR14I1A6ND48 311 aa12.41□□□□□ -0.42
RTFDC1-201ENST00000023939 FOXI3A8MTJ6 420 aaPredicted RBP12.41□□□□□ -0.42
RTFDC1-201ENST00000023939 A8MV72 311 aaPredicted RBP12.41□□□□□ -0.42
RTFDC1-201ENST00000023939 KLK10O43240 276 aa12.41□□□□□ -0.42
RTFDC1-201ENST00000023939 CYB5AP00167 134 aa12.41□□□□□ -0.42
RTFDC1-201ENST00000023939 CD3DP04234 171 aa12.41□□□□□ -0.42
RTFDC1-201ENST00000023939 MPZP25189 248 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms