RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 BlvrbQ923D2 206 aaKnown RBP9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Dnajb11Q99KV1 358 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Znf593Q9DB42 134 aaKnown RBP9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Jmjd6Q9ERI5 403 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Hapln1Q9QUP5 356 aaKnown RBP9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Lrrc3cA0A1B0GRI5 255 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 4930563M21RikA0A1L1SUT5 578 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Olfr1496B9EHG2 317 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Ceacam16E9QA28 426 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Olfr117L7N1Z1 317 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Rpusd3Q14AI6 344 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Olig3Q6PFG8 273 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Zfp273Q7M6W8 501 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Zfp85Q7TMC9 473 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Plcxd3Q8BLJ3 321 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Agpat2Q8K3K7 278 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Olfr47Q8VF18 321 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Olfr130Q8VFC1 317 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Olfr1226Q8VGM5 310 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Arrdc1Q99KN1 434 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Abhd5Q9DBL9 351 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Dtd1Q9DD18 209 aaKnown RBP9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Vmn1r40Q9EQ46 310 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Olfr945Q9EQB5 319 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 CtsjQ9R014 334 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Btbd35f23A0A0R4J2B9 498 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Mmp27D3YV89 551 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 LifP09056 203 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Tial1P70318 392 aaKnown RBP9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 G6pd2P97324 513 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Sidt1Q6AXF6 827 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 DdiasQ6NZG4 898 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Slc16a13Q8CE94 428 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Rnf113a1Q8R3P8 341 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Olfr582Q8VGV9 319 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Olfr584Q8VGW0 319 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Vps25Q9CQ80 176 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Mettl21AQ9CQL0 218 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Bex4Q9CWT2 118 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Gm4177D3YTX5 305 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Zfp944E9PUS4 492 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 1700080E11RikE9Q9G1 206 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Vmn1r103K7N6X7 305 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Vmn1r151L7N288 305 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Selenbp1P17563 472 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 NodalP43021 354 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Inpp5jP59644 1003 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Nanos3P60324 178 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Rpl27P61358 136 aaKnown RBP9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Eef1a2P62631 463 aaKnown RBP9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Map2k6P70236 334 aaKnown RBP9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 AY761185Q5ERI8 94 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Lcn12Q6JVL5 193 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Tas2r113Q7M711 309 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Vmn1r23Q8R2D0 302 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Olfr229Q8VFN5 307 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Ackr4Q924I3 350 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Pdzd11Q9CZG9 140 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Dazap1Q9JII5 406 aaKnown RBP9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 1700001O22RikA2APZ1 375 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 S100a10P08207 97 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Ctf1Q60753 203 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Ptp4a1Q63739 173 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Paqr9Q6TCG2 375 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Olfr1349Q7TQV1 317 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Plekho2Q8K124 495 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Olfr368Q8VF22 327 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Slc35a4Q9D321 324 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Olfr1338A2ACY7 313 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Vmn1r88E9Q235 316 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Vmn1r86L7N213 316 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 AF067061O70616 171 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Ntsr1O88319 424 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Pcsk4P29121 655 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 BaxQ07813 192 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Riiad1Q3KNY5 119 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 GcgrQ61606 485 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 WtipQ7TQJ8 398 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Olfr1386Q7TQT0 309 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Olfr205Q7TS37 305 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Aig1Q9D8B1 262 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Wfdc16A2A5H4 111 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Fabp9O08716 132 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 P01665 111 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 P01666 111 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 H1f0P10922 194 aaKnown RBP9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 DaoP18894 345 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Olfr453Q7TRV7 317 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 TMEM229BQ8BFQ2 167 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Banf2Q8BVR0 90 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Fam169bQ8CHT6 337 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Crlf2Q8CII9 359 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Agfg1Q8K2K6 561 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Vmn1r28Q8R2C9 302 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Olfr827Q8VEV5 322 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 PccbQ99MN9 541 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 P2ry12Q9CPV9 347 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Ankrd22Q9D3J5 191 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Pla2g12aQ9EPR2 192 aa9.28□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Suv39h2Q9EQQ0 477 aa9.28□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 28.8 ms