RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 AOX1Q06278 1338 aa10.71□□□□□ -0.69
HLA-B-258ENST00000640615 TTC39AQ5SRH9 613 aa10.71□□□□□ -0.69
HLA-B-258ENST00000640615 OLFM4Q6UX06 510 aa10.71□□□□□ -0.69
HLA-B-258ENST00000640615 PI4K2BQ8TCG2 481 aa10.71□□□□□ -0.69
HLA-B-258ENST00000640615 PIM2Q9P1W9 311 aa10.71□□□□□ -0.69
HLA-B-258ENST00000640615 GGA1Q9UJY5 639 aa10.71□□□□□ -0.69
HLA-B-258ENST00000640615 LEMD3Q9Y2U8 911 aa10.71□□□□□ -0.69
HLA-B-258ENST00000640615 TAF1P21675 1872 aa10.7□□□□□ -0.7
HLA-B-258ENST00000640615 TRIM6-TRIM34B2RNG4 842 aa10.7□□□□□ -0.7
HLA-B-258ENST00000640615 C6orf229H3BNL8 230 aa10.7□□□□□ -0.7
HLA-B-258ENST00000640615 UFL1O94874 794 aa10.7□□□□□ -0.7
HLA-B-258ENST00000640615 MAP4K4O95819 1239 aaPredicted RBP10.7□□□□□ -0.7
HLA-B-258ENST00000640615 GSPT1P15170 499 aaKnown RBP10.7□□□□□ -0.7
HLA-B-258ENST00000640615 ATP5JP18859 108 aa10.7□□□□□ -0.7
HLA-B-258ENST00000640615 CAVIN4Q5BKX8 364 aa10.7□□□□□ -0.7
HLA-B-258ENST00000640615 DPP8Q6V1X1 898 aaPredicted RBP10.7□□□□□ -0.7
HLA-B-258ENST00000640615 MPNDQ8N594 471 aa10.7□□□□□ -0.7
HLA-B-258ENST00000640615 BOLA2Q9H3K6 86 aa10.7□□□□□ -0.7
HLA-B-258ENST00000640615 WWC3Q9ULE0 1092 aa10.7□□□□□ -0.7
HLA-B-258ENST00000640615 C21orf2O43822 256 aa10.69□□□□□ -0.7
HLA-B-258ENST00000640615 PHKA1P46020 1223 aa10.69□□□□□ -0.7
HLA-B-258ENST00000640615 GYG1P46976 350 aa10.69□□□□□ -0.7
HLA-B-258ENST00000640615 BCAMP50895 628 aa10.69□□□□□ -0.7
HLA-B-258ENST00000640615 DALRD3Q5D0E6 543 aaKnown RBP10.69□□□□□ -0.7
HLA-B-258ENST00000640615 BMP2KLQ5H9B9 411 aa10.69□□□□□ -0.7
HLA-B-258ENST00000640615 CCDC102BQ68D86 513 aa10.69□□□□□ -0.7
HLA-B-258ENST00000640615 VPS37DQ86XT2 251 aa10.69□□□□□ -0.7
HLA-B-258ENST00000640615 TBC1D16Q8TBP0 767 aa10.69□□□□□ -0.7
HLA-B-258ENST00000640615 RILPL2Q969X0 211 aa10.69□□□□□ -0.7
HLA-B-258ENST00000640615 PODXL2Q9NZ53 605 aa10.69□□□□□ -0.7
HLA-B-258ENST00000640615 SPEF2Q9C093 1822 aa10.69□□□□□ -0.7
HLA-B-258ENST00000640615 COL11A2P13942 1736 aaPredicted RBP10.69□□□□□ -0.7
HLA-B-258ENST00000640615 UQCRFS1P1P0C7P4 283 aa10.68□□□□□ -0.7
HLA-B-258ENST00000640615 SDSP20132 328 aa10.68□□□□□ -0.7
HLA-B-258ENST00000640615 KLRK1P26718 216 aa10.68□□□□□ -0.7
HLA-B-258ENST00000640615 HIBADHP31937 336 aaKnown RBP10.68□□□□□ -0.7
HLA-B-258ENST00000640615 CC2D2BQ6DHV5 1058 aa10.68□□□□□ -0.7
HLA-B-258ENST00000640615 C7orf43Q8WVR3 580 aa10.68□□□□□ -0.7
HLA-B-258ENST00000640615 GPR101Q96P66 508 aaPredicted RBP10.68□□□□□ -0.7
HLA-B-258ENST00000640615 DNAJC2Q99543 621 aaKnown RBP10.68□□□□□ -0.7
HLA-B-258ENST00000640615 GNL3LQ9NVN8 582 aaKnown RBP10.68□□□□□ -0.7
HLA-B-258ENST00000640615 POLLQ9UGP5 575 aa10.68□□□□□ -0.7
HLA-B-258ENST00000640615 RIMBP2O15034 1052 aa10.67□□□□□ -0.7
HLA-B-258ENST00000640615 FKBP4Q02790 459 aaKnown RBP eCLIP10.67□□□□□ -0.7
HLA-B-258ENST00000640615 CCDC93Q567U6 631 aa10.67□□□□□ -0.7
HLA-B-258ENST00000640615 FBXO33Q7Z6M2 555 aa10.67□□□□□ -0.7
HLA-B-258ENST00000640615 TXNRD3Q86VQ6 643 aa10.67□□□□□ -0.7
HLA-B-258ENST00000640615 CNTROBQ8N137 903 aa10.67□□□□□ -0.7
HLA-B-258ENST00000640615 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.67□□□□□ -0.7
HLA-B-258ENST00000640615 ZNF512BQ96KM6 892 aaPredicted RBP10.67□□□□□ -0.7
HLA-B-258ENST00000640615 FAM84BQ96KN1 310 aaPredicted RBP10.67□□□□□ -0.7
HLA-B-258ENST00000640615 HAUS7Q99871 368 aa10.67□□□□□ -0.7
HLA-B-258ENST00000640615 SNRKQ9NRH2 765 aa10.67□□□□□ -0.7
HLA-B-258ENST00000640615 BRCA1P38398 1863 aaKnown RBP10.66□□□□□ -0.7
HLA-B-258ENST00000640615 FRAT2O75474 233 aaPredicted RBP10.66□□□□□ -0.7
HLA-B-258ENST00000640615 ARID4AP29374 1257 aaPredicted RBP10.66□□□□□ -0.7
HLA-B-258ENST00000640615 SCARF1Q14162 830 aa10.66□□□□□ -0.7
HLA-B-258ENST00000640615 GRIPAP1Q4V328 841 aa10.66□□□□□ -0.7
HLA-B-258ENST00000640615 SOGA3Q5TF21 947 aa10.66□□□□□ -0.7
HLA-B-258ENST00000640615 C15orf52Q6ZUT6 534 aaKnown RBP10.66□□□□□ -0.7
HLA-B-258ENST00000640615 ZNF804AQ7Z570 1209 aa10.66□□□□□ -0.7
HLA-B-258ENST00000640615 RTKN2Q8IZC4 609 aa10.66□□□□□ -0.7
HLA-B-258ENST00000640615 EVI5LQ96CN4 794 aa10.66□□□□□ -0.7
HLA-B-258ENST00000640615 EYA3Q99504 573 aa10.66□□□□□ -0.7
HLA-B-258ENST00000640615 ZC3H12CQ9C0D7 883 aaKnown RBP10.66□□□□□ -0.7
HLA-B-258ENST00000640615 IQSEC3Q9UPP2 1182 aaPredicted RBP10.66□□□□□ -0.7
HLA-B-258ENST00000640615 BCS1LQ9Y276 419 aa10.66□□□□□ -0.7
HLA-B-258ENST00000640615 NDUFB9Q9Y6M9 179 aa10.66□□□□□ -0.7
HLA-B-258ENST00000640615 IRS2Q9Y4H2 1338 aa10.65□□□□□ -0.7
HLA-B-258ENST00000640615 GOLIM4O00461 696 aa10.65□□□□□ -0.7
HLA-B-258ENST00000640615 MCAMP43121 646 aa10.65□□□□□ -0.7
HLA-B-258ENST00000640615 ZAP70P43403 619 aa10.65□□□□□ -0.7
HLA-B-258ENST00000640615 WASHC4Q2M389 1173 aa10.65□□□□□ -0.7
HLA-B-258ENST00000640615 PI16Q6UXB8 463 aa10.65□□□□□ -0.7
HLA-B-258ENST00000640615 SPATA5Q8NB90 893 aa10.65□□□□□ -0.7
HLA-B-258ENST00000640615 SUPT20HQ8NEM7 779 aa10.65□□□□□ -0.7
HLA-B-258ENST00000640615 EDC3Q96F86 508 aaKnown RBP10.65□□□□□ -0.7
HLA-B-258ENST00000640615 RTFDC1Q9BY42 306 aaPredicted RBP10.65□□□□□ -0.7
HLA-B-258ENST00000640615 PAG1Q9NWQ8 432 aa10.65□□□□□ -0.7
HLA-B-258ENST00000640615 HMG20BQ9P0W2 317 aa10.65□□□□□ -0.7
HLA-B-258ENST00000640615 MED23Q9ULK4 1368 aa10.65□□□□□ -0.71
HLA-B-258ENST00000640615 SLX4Q8IY92 1834 aa10.64□□□□□ -0.71
HLA-B-258ENST00000640615 G3V3G9 751 aa10.64□□□□□ -0.71
HLA-B-258ENST00000640615 SEMA3EO15041 775 aa10.64□□□□□ -0.71
HLA-B-258ENST00000640615 CDC45O75419 566 aa10.64□□□□□ -0.71
HLA-B-258ENST00000640615 RASGRF1Q13972 1273 aa10.64□□□□□ -0.71
HLA-B-258ENST00000640615 DCAF8Q5TAQ9 597 aa10.64□□□□□ -0.71
HLA-B-258ENST00000640615 FSD1Q9BTV5 496 aa10.64□□□□□ -0.71
HLA-B-258ENST00000640615 CD209Q9NNX6 404 aa10.64□□□□□ -0.71
HLA-B-258ENST00000640615 DENND2AQ9ULE3 1009 aa10.64□□□□□ -0.71
HLA-B-258ENST00000640615 CHAF1AQ13111 956 aaPredicted RBP10.63□□□□□ -0.71
HLA-B-258ENST00000640615 TTF1Q15361 905 aaPredicted RBP10.63□□□□□ -0.71
HLA-B-258ENST00000640615 DOK7Q18PE1 504 aa10.63□□□□□ -0.71
HLA-B-258ENST00000640615 C8orf34Q49A92 452 aa10.63□□□□□ -0.71
HLA-B-258ENST00000640615 CASC1Q6TDU7 716 aa10.63□□□□□ -0.71
HLA-B-258ENST00000640615 COA1Q9GZY4 146 aa10.63□□□□□ -0.71
HLA-B-258ENST00000640615 ANTXR1Q9H6X2 564 aa10.63□□□□□ -0.71
HLA-B-258ENST00000640615 GPBP1L1Q9HC44 474 aaPredicted RBP10.63□□□□□ -0.71
HLA-B-258ENST00000640615 LRRC37AA6NMS7 1700 aa10.63□□□□□ -0.71
HLA-B-258ENST00000640615 PPIP5K2O43314 1243 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms