RNA–Protein interactions for RNA: ENST00000638940.1

SPIN3-216, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,785 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-216ENST00000638940 FOXD4L5Q5VV16 416 aaPredicted RBP12.63□□□□□ -0.39
SPIN3-216ENST00000638940 ZSCAN25Q6NSZ9 544 aa12.63□□□□□ -0.39
SPIN3-216ENST00000638940 DHX32Q7L7V1 743 aaKnown RBP12.63□□□□□ -0.39
SPIN3-216ENST00000638940 FOXD4L4Q8WXT5 416 aaPredicted RBP12.63□□□□□ -0.39
SPIN3-216ENST00000638940 CAMTA2O94983 1202 aa12.63□□□□□ -0.39
SPIN3-216ENST00000638940 PDE8BO95263 885 aa12.63□□□□□ -0.39
SPIN3-216ENST00000638940 ATP6V1AP38606 617 aa12.63□□□□□ -0.39
SPIN3-216ENST00000638940 APPBP2Q92624 585 aa12.63□□□□□ -0.39
SPIN3-216ENST00000638940 LARP6Q9BRS8 491 aaKnown RBP12.63□□□□□ -0.39
SPIN3-216ENST00000638940 LLPHQ9BRT6 129 aaKnown RBP12.63□□□□□ -0.39
SPIN3-216ENST00000638940 UQCRFS1P1P0C7P4 283 aa12.62□□□□□ -0.39
SPIN3-216ENST00000638940 EXOSC10Q01780 885 aaKnown RBP12.62□□□□□ -0.39
SPIN3-216ENST00000638940 LRSAM1Q6UWE0 723 aa12.62□□□□□ -0.39
SPIN3-216ENST00000638940 USP48Q86UV5 1035 aa12.62□□□□□ -0.39
SPIN3-216ENST00000638940 SYNE4Q8N205 404 aa12.62□□□□□ -0.39
SPIN3-216ENST00000638940 GTF3C6Q969F1 213 aa12.62□□□□□ -0.39
SPIN3-216ENST00000638940 UTP14AQ9BVJ6 771 aaKnown RBP12.62□□□□□ -0.39
SPIN3-216ENST00000638940 CNNM1Q9NRU3 951 aa12.62□□□□□ -0.39
SPIN3-216ENST00000638940 TMEM63CQ9P1W3 806 aa12.62□□□□□ -0.39
SPIN3-216ENST00000638940 TBC1D2BQ9UPU7 963 aa12.62□□□□□ -0.39
SPIN3-216ENST00000638940 ARID4AP29374 1257 aaPredicted RBP12.62□□□□□ -0.39
SPIN3-216ENST00000638940 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.62□□□□□ -0.39
SPIN3-216ENST00000638940 PHF14O94880 888 aa12.61□□□□□ -0.39
SPIN3-216ENST00000638940 FGFR2P21802 821 aa12.61□□□□□ -0.39
SPIN3-216ENST00000638940 NECAB1Q8N987 351 aa12.61□□□□□ -0.39
SPIN3-216ENST00000638940 DOCK2Q92608 1830 aa12.61□□□□□ -0.39
SPIN3-216ENST00000638940 M0R2C6 588 aa12.61□□□□□ -0.39
SPIN3-216ENST00000638940 CHGBP05060 677 aa12.61□□□□□ -0.39
SPIN3-216ENST00000638940 UBE2HP62256 183 aa12.61□□□□□ -0.39
SPIN3-216ENST00000638940 FKBP4Q02790 459 aaKnown RBP eCLIP12.61□□□□□ -0.39
SPIN3-216ENST00000638940 CLEC4GQ6UXB4 293 aa12.61□□□□□ -0.39
SPIN3-216ENST00000638940 Q6ZUG5 572 aa12.61□□□□□ -0.39
SPIN3-216ENST00000638940 STOX1Q6ZVD7 989 aa12.61□□□□□ -0.39
SPIN3-216ENST00000638940 OSBP2Q969R2 916 aa12.61□□□□□ -0.39
SPIN3-216ENST00000638940 CCDC9Q9Y3X0 531 aaKnown RBP12.61□□□□□ -0.39
SPIN3-216ENST00000638940 PFKFB2O60825 505 aa12.6□□□□□ -0.39
SPIN3-216ENST00000638940 ITPK1Q13572 414 aa12.6□□□□□ -0.39
SPIN3-216ENST00000638940 COL9A3Q14050 684 aaPredicted RBP12.6□□□□□ -0.39
SPIN3-216ENST00000638940 PUM3Q15397 648 aaKnown RBP12.6□□□□□ -0.39
SPIN3-216ENST00000638940 VPS72Q15906 364 aa12.6□□□□□ -0.39
SPIN3-216ENST00000638940 SUSD4Q5VX71 490 aa12.6□□□□□ -0.39
SPIN3-216ENST00000638940 LARP1BQ659C4 914 aaKnown RBP12.6□□□□□ -0.39
SPIN3-216ENST00000638940 LPIN2Q92539 896 aa12.6□□□□□ -0.39
SPIN3-216ENST00000638940 CHAMP1Q96JM3 812 aa12.6□□□□□ -0.39
SPIN3-216ENST00000638940 LETM1O95202 739 aaPredicted RBP12.6□□□□□ -0.39
SPIN3-216ENST00000638940 ZAP70P43403 619 aa12.6□□□□□ -0.39
SPIN3-216ENST00000638940 PPP1R9BQ96SB3 815 aa12.6□□□□□ -0.39
SPIN3-216ENST00000638940 NSFL1CQ9UNZ2 370 aaKnown RBP12.6□□□□□ -0.39
SPIN3-216ENST00000638940 WDR19Q8NEZ3 1342 aa12.6□□□□□ -0.39
SPIN3-216ENST00000638940 E7EWF7 191 aa12.59□□□□□ -0.39
SPIN3-216ENST00000638940 NASPP49321 788 aaPredicted RBP12.59□□□□□ -0.39
SPIN3-216ENST00000638940 EVCP57679 992 aa12.59□□□□□ -0.39
SPIN3-216ENST00000638940 CCDC173Q0VFZ6 552 aa12.59□□□□□ -0.39
SPIN3-216ENST00000638940 SCARF1Q14162 830 aa12.59□□□□□ -0.39
SPIN3-216ENST00000638940 UBE3CQ15386 1083 aa12.59□□□□□ -0.39
SPIN3-216ENST00000638940 SMARCC2Q8TAQ2 1214 aa12.59□□□□□ -0.39
SPIN3-216ENST00000638940 CCDC85AQ96PX6 553 aaPredicted RBP12.59□□□□□ -0.39
SPIN3-216ENST00000638940 ZNF652Q9Y2D9 606 aa12.59□□□□□ -0.39
SPIN3-216ENST00000638940 MCAMP43121 646 aa12.59□□□□□ -0.39
SPIN3-216ENST00000638940 RBM27Q9P2N5 1060 aaKnown RBP12.59□□□□□ -0.39
SPIN3-216ENST00000638940 CNPY2Q9Y2B0 182 aa12.59□□□□□ -0.39
SPIN3-216ENST00000638940 ELP1O95163 1332 aa12.59□□□□□ -0.39
SPIN3-216ENST00000638940 SCN7AQ01118 1682 aa12.59□□□□□ -0.39
SPIN3-216ENST00000638940 NTSR2O95665 410 aa12.58□□□□□ -0.39
SPIN3-216ENST00000638940 ADD2P35612 726 aa12.58□□□□□ -0.39
SPIN3-216ENST00000638940 CCDC152Q4G0S7 254 aa12.58□□□□□ -0.39
SPIN3-216ENST00000638940 ZNF274Q96GC6 653 aaPredicted RBP12.58□□□□□ -0.39
SPIN3-216ENST00000638940 ACSBG1Q96GR2 724 aa12.58□□□□□ -0.39
SPIN3-216ENST00000638940 BCL9LQ86UU0 1499 aa12.58□□□□□ -0.4
SPIN3-216ENST00000638940 IMMTQ16891 758 aaKnown RBP12.58□□□□□ -0.4
SPIN3-216ENST00000638940 TCEANC2Q96MN5 208 aa12.58□□□□□ -0.4
SPIN3-216ENST00000638940 CNTNAP4Q9C0A0 1308 aa12.58□□□□□ -0.4
SPIN3-216ENST00000638940 NUTM2BA6NNL0 878 aaPredicted RBP12.58□□□□□ -0.4
SPIN3-216ENST00000638940 NUTM2EB1AL46 878 aaPredicted RBP12.58□□□□□ -0.4
SPIN3-216ENST00000638940 SLC5A1P13866 664 aa12.58□□□□□ -0.4
SPIN3-216ENST00000638940 NUTM2AQ8IVF1 878 aaPredicted RBP12.58□□□□□ -0.4
SPIN3-216ENST00000638940 ANP32BQ92688 251 aaKnown RBP12.58□□□□□ -0.4
SPIN3-216ENST00000638940 THSD7AQ9UPZ6 1657 aa12.57□□□□□ -0.4
SPIN3-216ENST00000638940 FOXP2O15409 715 aa12.57□□□□□ -0.4
SPIN3-216ENST00000638940 GADD45BO75293 160 aaPredicted RBP12.57□□□□□ -0.4
SPIN3-216ENST00000638940 HMGN5P82970 282 aaKnown RBP12.57□□□□□ -0.4
SPIN3-216ENST00000638940 WASHC4Q2M389 1173 aa12.57□□□□□ -0.4
SPIN3-216ENST00000638940 CCDC183Q5T5S1 534 aa12.57□□□□□ -0.4
SPIN3-216ENST00000638940 CCDC102BQ68D86 513 aa12.57□□□□□ -0.4
SPIN3-216ENST00000638940 RGS22Q8NE09 1264 aa12.57□□□□□ -0.4
SPIN3-216ENST00000638940 BCL11BQ9C0K0 894 aaPredicted RBP12.57□□□□□ -0.4
SPIN3-216ENST00000638940 KIF3AQ9Y496 699 aa12.57□□□□□ -0.4
SPIN3-216ENST00000638940 ZMYM6O95789 1325 aa12.57□□□□□ -0.4
SPIN3-216ENST00000638940 A0A1B0GUL6 1792 aa12.57□□□□□ -0.4
SPIN3-216ENST00000638940 SLFNL1Q499Z3 407 aa12.57□□□□□ -0.4
SPIN3-216ENST00000638940 BRF1Q92994 677 aa12.57□□□□□ -0.4
SPIN3-216ENST00000638940 NHSQ6T4R5 1651 aa12.57□□□□□ -0.4
SPIN3-216ENST00000638940 MYH15Q9Y2K3 1946 aa12.57□□□□□ -0.4
SPIN3-216ENST00000638940 VPS37CA5D8V6 355 aaPredicted RBP12.56□□□□□ -0.4
SPIN3-216ENST00000638940 KRT85P78386 507 aa12.56□□□□□ -0.4
SPIN3-216ENST00000638940 RC3H1Q5TC82 1133 aaKnown RBP12.56□□□□□ -0.4
SPIN3-216ENST00000638940 FNBP4Q8N3X1 1017 aaPredicted RBP12.56□□□□□ -0.4
SPIN3-216ENST00000638940 RBSNQ9H1K0 784 aa12.56□□□□□ -0.4
SPIN3-216ENST00000638940 CASZ1Q86V15 1759 aa12.56□□□□□ -0.4
SPIN3-216ENST00000638940 ALX1Q15699 326 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms