RNA–Protein interactions for RNA: ENST00000638281.1

GFAP-225, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5 BASIC

Gene GFAP, Length 2,099 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-225ENST00000638281 SLFNL1Q499Z3 407 aa18.78■□□□□ 0.6
GFAP-225ENST00000638281 PRPF40BQ6NWY9 871 aaKnown RBP18.78■□□□□ 0.6
GFAP-225ENST00000638281 FAM196AQ6ZSG2 479 aa18.78■□□□□ 0.6
GFAP-225ENST00000638281 RBM8AQ9Y5S9 174 aaKnown RBP18.78■□□□□ 0.6
GFAP-225ENST00000638281 LRSAM1Q6UWE0 723 aa18.77■□□□□ 0.6
GFAP-225ENST00000638281 KCNB2Q92953 911 aa18.77■□□□□ 0.6
GFAP-225ENST00000638281 MROH5Q6ZUA9 1318 aa18.77■□□□□ 0.59
GFAP-225ENST00000638281 TAF5LO75529 589 aa18.77■□□□□ 0.59
GFAP-225ENST00000638281 TPM2P07951 284 aa18.77■□□□□ 0.59
GFAP-225ENST00000638281 SPEF2Q9C093 1822 aa18.76■□□□□ 0.59
GFAP-225ENST00000638281 PHF14O94880 888 aa18.76■□□□□ 0.59
GFAP-225ENST00000638281 FKBP4Q02790 459 aaKnown RBP eCLIP18.76■□□□□ 0.59
GFAP-225ENST00000638281 PI16Q6UXB8 463 aa18.76■□□□□ 0.59
GFAP-225ENST00000638281 CCDC129Q6ZRS4 1044 aa18.76■□□□□ 0.59
GFAP-225ENST00000638281 MPHOSPH8Q99549 860 aa18.76■□□□□ 0.59
GFAP-225ENST00000638281 RBSNQ9H1K0 784 aa18.76■□□□□ 0.59
GFAP-225ENST00000638281 ABCC12Q96J65 1359 aa18.76■□□□□ 0.59
GFAP-225ENST00000638281 TRIM37O94972 964 aa18.75■□□□□ 0.59
GFAP-225ENST00000638281 FGFR2P21802 821 aa18.75■□□□□ 0.59
GFAP-225ENST00000638281 MSNP26038 577 aaKnown RBP18.75■□□□□ 0.59
GFAP-225ENST00000638281 SETDB2Q96T68 719 aa18.75■□□□□ 0.59
GFAP-225ENST00000638281 C4AP0C0L4 1744 aa18.75■□□□□ 0.59
GFAP-225ENST00000638281 COL24A1Q17RW2 1714 aa18.75■□□□□ 0.59
GFAP-225ENST00000638281 TERF1P54274 439 aa18.75■□□□□ 0.59
GFAP-225ENST00000638281 PUM3Q15397 648 aaKnown RBP18.75■□□□□ 0.59
GFAP-225ENST00000638281 CREB3L3Q68CJ9 461 aa18.75■□□□□ 0.59
GFAP-225ENST00000638281 SNAP23O00161 211 aa18.74■□□□□ 0.59
GFAP-225ENST00000638281 RRP9O43818 475 aaKnown RBP18.74■□□□□ 0.59
GFAP-225ENST00000638281 ZAP70P43403 619 aa18.74■□□□□ 0.59
GFAP-225ENST00000638281 SF3B3Q15393 1217 aaKnown RBP18.74■□□□□ 0.59
GFAP-225ENST00000638281 ADCK5Q3MIX3 580 aa18.74■□□□□ 0.59
GFAP-225ENST00000638281 MCMDC2Q4G0Z9 681 aa18.74■□□□□ 0.59
GFAP-225ENST00000638281 SLC10A5Q5PT55 438 aa18.74■□□□□ 0.59
GFAP-225ENST00000638281 CASZ1Q86V15 1759 aa18.74■□□□□ 0.59
GFAP-225ENST00000638281 IGHMBP2P38935 993 aaKnown RBP18.73■□□□□ 0.59
GFAP-225ENST00000638281 MCAMP43121 646 aa18.73■□□□□ 0.59
GFAP-225ENST00000638281 KCNJ4P48050 445 aa18.73■□□□□ 0.59
GFAP-225ENST00000638281 TRAPPC3LQ5T215 181 aa18.73■□□□□ 0.59
GFAP-225ENST00000638281 SYAP1Q96A49 352 aaPredicted RBP18.73■□□□□ 0.59
GFAP-225ENST00000638281 TMEM63CQ9P1W3 806 aa18.73■□□□□ 0.59
GFAP-225ENST00000638281 NOL7Q9UMY1 257 aaKnown RBP18.73■□□□□ 0.59
GFAP-225ENST00000638281 SLC27A2O14975 620 aa18.73■□□□□ 0.59
GFAP-225ENST00000638281 OFD1O75665 1012 aa18.73■□□□□ 0.59
GFAP-225ENST00000638281 CPA1P15085 419 aa18.73■□□□□ 0.59
GFAP-225ENST00000638281 GTF2E1P29083 439 aaPredicted RBP18.73■□□□□ 0.59
GFAP-225ENST00000638281 MCM5P33992 734 aa18.73■□□□□ 0.59
GFAP-225ENST00000638281 RFC4P35249 363 aa18.73■□□□□ 0.59
GFAP-225ENST00000638281 ZMYM1Q5SVZ6 1142 aa18.73■□□□□ 0.59
GFAP-225ENST00000638281 NOL8Q76FK4 1167 aaKnown RBP18.73■□□□□ 0.59
GFAP-225ENST00000638281 NBPF5PQ86XG9 351 aaPredicted RBP18.73■□□□□ 0.59
GFAP-225ENST00000638281 TICAM2Q86XR7 235 aa18.73■□□□□ 0.59
GFAP-225ENST00000638281 LPIN2Q92539 896 aa18.73■□□□□ 0.59
GFAP-225ENST00000638281 AKAP11Q9UKA4 1901 aa18.73■□□□□ 0.59
GFAP-225ENST00000638281 RNF113AO15541 343 aaKnown RBP18.72■□□□□ 0.59
GFAP-225ENST00000638281 PHKA1P46020 1223 aa18.72■□□□□ 0.59
GFAP-225ENST00000638281 ZNF512BQ96KM6 892 aaPredicted RBP18.72■□□□□ 0.59
GFAP-225ENST00000638281 TTC14Q96N46 770 aa18.72■□□□□ 0.59
GFAP-225ENST00000638281 TAF6LQ9Y6J9 622 aa18.72■□□□□ 0.59
GFAP-225ENST00000638281 CASTP20810 708 aaKnown RBP18.72■□□□□ 0.59
GFAP-225ENST00000638281 CCDC102BQ68D86 513 aa18.72■□□□□ 0.59
GFAP-225ENST00000638281 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.72■□□□□ 0.59
GFAP-225ENST00000638281 CCDC24Q8N4L8 307 aa18.72■□□□□ 0.59
GFAP-225ENST00000638281 JAKMIP1Q96N16 626 aaKnown RBP18.72■□□□□ 0.59
GFAP-225ENST00000638281 NYXQ9GZU5 481 aa18.72■□□□□ 0.59
GFAP-225ENST00000638281 HELLSQ9NRZ9 838 aa18.72■□□□□ 0.59
GFAP-225ENST00000638281 ARAP2Q8WZ64 1704 aa18.72■□□□□ 0.59
GFAP-225ENST00000638281 TAF1P21675 1872 aa18.71■□□□□ 0.59
GFAP-225ENST00000638281 RBM6P78332 1123 aaKnown RBP18.71■□□□□ 0.59
GFAP-225ENST00000638281 WDR33Q9C0J8 1336 aaKnown RBP18.71■□□□□ 0.59
GFAP-225ENST00000638281 ZNF500O60304 480 aaPredicted RBP18.7■□□□□ 0.58
GFAP-225ENST00000638281 ZKSCAN1P17029 563 aaPredicted RBP18.7■□□□□ 0.58
GFAP-225ENST00000638281 CHRNDQ07001 517 aa18.7■□□□□ 0.58
GFAP-225ENST00000638281 ZNF772Q68DY9 489 aaPredicted RBP18.7■□□□□ 0.58
GFAP-225ENST00000638281 KLHL34Q8N239 644 aa18.7■□□□□ 0.58
GFAP-225ENST00000638281 CDC5LQ99459 802 aaKnown RBP18.7■□□□□ 0.58
GFAP-225ENST00000638281 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.7■□□□□ 0.58
GFAP-225ENST00000638281 ARID4AP29374 1257 aaPredicted RBP18.7■□□□□ 0.58
GFAP-225ENST00000638281 COL9A3Q14050 684 aaPredicted RBP18.7■□□□□ 0.58
GFAP-225ENST00000638281 UBR3Q6ZT12 1888 aa18.7■□□□□ 0.58
GFAP-225ENST00000638281 TM6SF1Q9BZW5 370 aa18.7■□□□□ 0.58
GFAP-225ENST00000638281 ZSWIM6Q9HCJ5 1215 aa18.7■□□□□ 0.58
GFAP-225ENST00000638281 RBM27Q9P2N5 1060 aaKnown RBP18.7■□□□□ 0.58
GFAP-225ENST00000638281 MAST3O60307 1309 aa18.7■□□□□ 0.58
GFAP-225ENST00000638281 SLC5A1P13866 664 aa18.69■□□□□ 0.58
GFAP-225ENST00000638281 SLC27A3Q5K4L6 730 aa18.69■□□□□ 0.58
GFAP-225ENST00000638281 TPTE2Q6XPS3 522 aa18.69■□□□□ 0.58
GFAP-225ENST00000638281 AK2P54819 239 aa18.69■□□□□ 0.58
GFAP-225ENST00000638281 ANKRD18AQ8IVF6 992 aa18.69■□□□□ 0.58
GFAP-225ENST00000638281 PROM2Q8N271 834 aa18.69■□□□□ 0.58
GFAP-225ENST00000638281 OSBP2Q969R2 916 aa18.69■□□□□ 0.58
GFAP-225ENST00000638281 RPAP1Q9BWH6 1393 aaPredicted RBP18.68■□□□□ 0.58
GFAP-225ENST00000638281 SYCE3A1L190 88 aa18.68■□□□□ 0.58
GFAP-225ENST00000638281 M0R2C6 588 aa18.68■□□□□ 0.58
GFAP-225ENST00000638281 ADRA2BP18089 450 aa18.68■□□□□ 0.58
GFAP-225ENST00000638281 NFIXQ14938 502 aa18.68■□□□□ 0.58
GFAP-225ENST00000638281 VPS53Q5VIR6 699 aa18.68■□□□□ 0.58
GFAP-225ENST00000638281 RNF20Q5VTR2 975 aa18.68■□□□□ 0.58
GFAP-225ENST00000638281 CELF1Q92879 486 aaKnown RBP18.68■□□□□ 0.58
GFAP-225ENST00000638281 RUFY3Q7L099 469 aa18.67■□□□□ 0.58
GFAP-225ENST00000638281 UQCRFS1P1P0C7P4 283 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms