RNA–Protein interactions for RNA: ENST00000638175.1

SCARB2-206, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-206ENST00000638175 COL5A2P05997 1499 aaPredicted RBP8.47□□□□□ -1.05
SCARB2-206ENST00000638175 CDK12Q9NYV4 1490 aaPredicted RBP8.47□□□□□ -1.05
SCARB2-206ENST00000638175 SCTRP47872 440 aa8.47□□□□□ -1.05
SCARB2-206ENST00000638175 RAB15P59190 212 aa8.47□□□□□ -1.05
SCARB2-206ENST00000638175 TMEM164Q5U3C3 297 aa8.47□□□□□ -1.05
SCARB2-206ENST00000638175 Q6ZVU0 165 aa8.47□□□□□ -1.05
SCARB2-206ENST00000638175 NGLY1Q96IV0 654 aa8.47□□□□□ -1.05
SCARB2-206ENST00000638175 COG3Q96JB2 828 aa8.47□□□□□ -1.05
SCARB2-206ENST00000638175 PANK3Q9H999 370 aa8.47□□□□□ -1.05
SCARB2-206ENST00000638175 PRDM11Q9NQV5 511 aa8.47□□□□□ -1.05
SCARB2-206ENST00000638175 AATKQ6ZMQ8 1374 aa8.47□□□□□ -1.05
SCARB2-206ENST00000638175 NPC1L1Q9UHC9 1359 aa8.47□□□□□ -1.05
SCARB2-206ENST00000638175 THSD7AQ9UPZ6 1657 aa8.46□□□□□ -1.05
SCARB2-206ENST00000638175 FAM181BA6NEQ2 426 aa8.46□□□□□ -1.06
SCARB2-206ENST00000638175 FIGNL2A6NMB9 653 aa8.46□□□□□ -1.06
SCARB2-206ENST00000638175 TTLL8A6PVC2 850 aa8.46□□□□□ -1.06
SCARB2-206ENST00000638175 FYB1O15117 783 aa8.46□□□□□ -1.06
SCARB2-206ENST00000638175 LILRA1O75019 489 aa8.46□□□□□ -1.06
SCARB2-206ENST00000638175 MYCP01106 439 aaPredicted RBP8.46□□□□□ -1.06
SCARB2-206ENST00000638175 ZNF784Q8NCA9 323 aaPredicted RBP8.46□□□□□ -1.06
SCARB2-206ENST00000638175 OSBPL3Q9H4L5 887 aa8.46□□□□□ -1.06
SCARB2-206ENST00000638175 TMPRSS4Q9NRS4 437 aa8.46□□□□□ -1.06
SCARB2-206ENST00000638175 PGPEP1Q9NXJ5 209 aa8.46□□□□□ -1.06
SCARB2-206ENST00000638175 KNSTRNQ9Y448 316 aa8.46□□□□□ -1.06
SCARB2-206ENST00000638175 SMG6Q86US8 1419 aaKnown RBP8.46□□□□□ -1.06
SCARB2-206ENST00000638175 ZC3H6P61129 1189 aaKnown RBP8.45□□□□□ -1.06
SCARB2-206ENST00000638175 UNC5CLQ8IV45 518 aa8.45□□□□□ -1.06
SCARB2-206ENST00000638175 KCTD17Q8N5Z5 321 aa8.45□□□□□ -1.06
SCARB2-206ENST00000638175 AGBL1Q96MI9 1066 aa8.45□□□□□ -1.06
SCARB2-206ENST00000638175 USP21Q9UK80 565 aa8.45□□□□□ -1.06
SCARB2-206ENST00000638175 TRPC5Q9UL62 973 aaPredicted RBP8.45□□□□□ -1.06
SCARB2-206ENST00000638175 LRRC37A3O60309 1634 aa8.44□□□□□ -1.06
SCARB2-206ENST00000638175 FAM83GA6ND36 823 aa8.44□□□□□ -1.06
SCARB2-206ENST00000638175 SPINT1O43278 529 aa8.44□□□□□ -1.06
SCARB2-206ENST00000638175 DPYDQ12882 1025 aa8.44□□□□□ -1.06
SCARB2-206ENST00000638175 SWI5Q1ZZU3 235 aa8.44□□□□□ -1.06
SCARB2-206ENST00000638175 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.44□□□□□ -1.06
SCARB2-206ENST00000638175 ARHGEF25Q86VW2 580 aa8.44□□□□□ -1.06
SCARB2-206ENST00000638175 GPR161Q8N6U8 529 aaKnown RBP8.44□□□□□ -1.06
SCARB2-206ENST00000638175 FAM200AQ8TCP9 573 aa8.44□□□□□ -1.06
SCARB2-206ENST00000638175 ZNF594Q96JF6 807 aaPredicted RBP8.44□□□□□ -1.06
SCARB2-206ENST00000638175 GGNBP2Q9H3C7 697 aa8.44□□□□□ -1.06
SCARB2-206ENST00000638175 RGS17Q9UGC6 210 aaPredicted RBP8.44□□□□□ -1.06
SCARB2-206ENST00000638175 CRB1P82279 1406 aa8.44□□□□□ -1.06
SCARB2-206ENST00000638175 VIRMAQ69YN4 1812 aaKnown RBP8.43□□□□□ -1.06
SCARB2-206ENST00000638175 M0R2N6 131 aa8.43□□□□□ -1.06
SCARB2-206ENST00000638175 BRD1O95696 1058 aa8.43□□□□□ -1.06
SCARB2-206ENST00000638175 PTSQ03393 145 aa8.43□□□□□ -1.06
SCARB2-206ENST00000638175 CCDC102BQ68D86 513 aa8.43□□□□□ -1.06
SCARB2-206ENST00000638175 CLP1Q92989 425 aaKnown RBP8.43□□□□□ -1.06
SCARB2-206ENST00000638175 BTG4Q9NY30 223 aa8.43□□□□□ -1.06
SCARB2-206ENST00000638175 FLT4P35916 1363 aa8.43□□□□□ -1.06
SCARB2-206ENST00000638175 RGPD1P0DJD0 1748 aa8.43□□□□□ -1.06
SCARB2-206ENST00000638175 CARNS1A5YM72 827 aa8.42□□□□□ -1.06
SCARB2-206ENST00000638175 SEC13P55735 322 aa8.42□□□□□ -1.06
SCARB2-206ENST00000638175 CHRNA2Q15822 529 aa8.42□□□□□ -1.06
SCARB2-206ENST00000638175 VPS72Q15906 364 aa8.42□□□□□ -1.06
SCARB2-206ENST00000638175 TPCN2Q8NHX9 752 aa8.42□□□□□ -1.06
SCARB2-206ENST00000638175 CYLDQ9NQC7 956 aa8.42□□□□□ -1.06
SCARB2-206ENST00000638175 MAP3K19Q56UN5 1328 aa8.42□□□□□ -1.06
SCARB2-206ENST00000638175 PKD1L3Q7Z443 1732 aa8.42□□□□□ -1.06
SCARB2-206ENST00000638175 SHANK3Q9BYB0 1731 aa8.42□□□□□ -1.06
SCARB2-206ENST00000638175 SBF2Q86WG5 1849 aa8.41□□□□□ -1.06
SCARB2-206ENST00000638175 RGS12O14924 1447 aa8.41□□□□□ -1.06
SCARB2-206ENST00000638175 WDR17Q8IZU2 1322 aa8.41□□□□□ -1.06
SCARB2-206ENST00000638175 CTSOP43234 321 aaPredicted RBP8.41□□□□□ -1.06
SCARB2-206ENST00000638175 RBM6P78332 1123 aaKnown RBP8.41□□□□□ -1.06
SCARB2-206ENST00000638175 RELBQ01201 579 aa8.41□□□□□ -1.06
SCARB2-206ENST00000638175 KRT76Q01546 638 aa8.41□□□□□ -1.06
SCARB2-206ENST00000638175 CYP2U1Q7Z449 544 aa8.41□□□□□ -1.06
SCARB2-206ENST00000638175 INSRP06213 1382 aa8.4□□□□□ -1.06
SCARB2-206ENST00000638175 ZBTB7CA1YPR0 619 aa8.4□□□□□ -1.06
SCARB2-206ENST00000638175 TMEM229AB2RXF0 380 aa8.4□□□□□ -1.06
SCARB2-206ENST00000638175 RXRBP28702 533 aa8.4□□□□□ -1.06
SCARB2-206ENST00000638175 ADD1P35611 737 aaKnown RBP8.4□□□□□ -1.06
SCARB2-206ENST00000638175 SCNN1DP51172 638 aa8.4□□□□□ -1.06
SCARB2-206ENST00000638175 INSM2Q96T92 566 aaPredicted RBP8.4□□□□□ -1.06
SCARB2-206ENST00000638175 QTRT2Q9H974 415 aaKnown RBP8.4□□□□□ -1.06
SCARB2-206ENST00000638175 KAT6BQ8WYB5 2073 aa8.4□□□□□ -1.06
SCARB2-206ENST00000638175 EP400Q96L91 3159 aa8.4□□□□□ -1.07
SCARB2-206ENST00000638175 SPATA31A1Q5TZJ5 1347 aa8.39□□□□□ -1.07
SCARB2-206ENST00000638175 SPATA31A5Q5VU36 1347 aa8.39□□□□□ -1.07
SCARB2-206ENST00000638175 SPATA31A7Q8IWB4 1347 aa8.39□□□□□ -1.07
SCARB2-206ENST00000638175 AMPHP49418 695 aa8.39□□□□□ -1.07
SCARB2-206ENST00000638175 EVA1CP58658 441 aa8.39□□□□□ -1.07
SCARB2-206ENST00000638175 KCNA1Q09470 495 aa8.39□□□□□ -1.07
SCARB2-206ENST00000638175 B4GALNT3Q6L9W6 998 aa8.39□□□□□ -1.07
SCARB2-206ENST00000638175 POTEAQ6S8J7 498 aa8.39□□□□□ -1.07
SCARB2-206ENST00000638175 MORC1Q86VD1 984 aa8.39□□□□□ -1.07
SCARB2-206ENST00000638175 IP6K1Q92551 441 aa8.39□□□□□ -1.07
SCARB2-206ENST00000638175 THRAP3Q9Y2W1 955 aaKnown RBP8.39□□□□□ -1.07
SCARB2-206ENST00000638175 NCAPD2Q15021 1401 aa8.38□□□□□ -1.07
SCARB2-206ENST00000638175 PARD3Q8TEW0 1356 aa8.38□□□□□ -1.07
SCARB2-206ENST00000638175 SFI1A8K8P3 1242 aa8.38□□□□□ -1.07
SCARB2-206ENST00000638175 PATL2C9JE40 543 aaKnown RBP8.38□□□□□ -1.07
SCARB2-206ENST00000638175 GNRH1P01148 92 aa8.38□□□□□ -1.07
SCARB2-206ENST00000638175 ADH1AP07327 375 aa8.38□□□□□ -1.07
SCARB2-206ENST00000638175 HOXC9P31274 260 aa8.38□□□□□ -1.07
SCARB2-206ENST00000638175 RRS1Q15050 365 aaKnown RBP8.38□□□□□ -1.07
SCARB2-206ENST00000638175 CCDC155Q8N6L0 562 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms