RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 TENM4Q6N022 2769 aa-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 FLG2Q5D862 2391 aaPredicted RBP-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 ADAMTS20P59510 1910 aa-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 DHX57Q6P158 1386 aaKnown RBP-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 PCLOQ9Y6V0 5065 aa-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 KMT2BQ9UMN6 2715 aaPredicted RBP-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 COL2A1P02458 1487 aaPredicted RBP-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 ELOA3CA0A087WX78 387 aaPredicted RBP-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 TMEM129A0AVI4 362 aa-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 ANTXRLA6NF34 631 aa-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 A6NHS1 94 aa-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 ELOA3DA6NLF2 546 aaPredicted RBP-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 NARSO43776 548 aaKnown RBP-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 PI3P19957 117 aa-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 RGS3P49796 1198 aa-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 ARSDP51689 593 aa-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 GDF10P55107 478 aa-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 PCBP4P57723 403 aaKnown RBP-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 COL10A1Q03692 680 aa-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 BNIP3Q12983 259 aa-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 NR5A1Q13285 461 aa-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 ZNF268Q14587 947 aaPredicted RBP-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 ZIK1Q3SY52 487 aaPredicted RBP-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 ELOA3BQ3SY89 546 aa-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 MIDNQ504T8 468 aa-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 USPL1Q5W0Q7 1092 aa-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 TYW1BQ6NUM6 668 aa-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 RHBDF2Q6PJF5 856 aa-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 LRFN4Q6PJG9 635 aa-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 GLDNQ6ZMI3 551 aaPredicted RBP-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 PRICKLE2Q7Z3G6 844 aa-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 CLEC10AQ8IUN9 316 aa-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 PALM2Q8IXS6 379 aa-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 PLPP6Q8IY26 295 aa-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 ARMC10Q8N2F6 343 aa-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 CCDC24Q8N4L8 307 aa-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 FBXL6Q8N531 539 aa-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 ELOA3Q8NG57 546 aa-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 OXER1Q8TDS5 423 aa-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 PANK1Q8TE04 598 aa-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 STAG1Q8WVM7 1258 aa-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 UPF1Q92900 1129 aaKnown RBP eCLIP-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 UTP4Q969X6 686 aaKnown RBP-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 DACT3Q96B18 629 aaPredicted RBP-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 RGMAQ96B86 450 aa-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 ABHD17AQ96GS6 310 aa-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 FAM83CQ9BQN1 747 aa-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 KLC2Q9H0B6 622 aa-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 BCAS3Q9H6U6 928 aa-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 EHMT1Q9H9B1 1298 aa-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 PNMA3Q9UL41 463 aa-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 ATXN7L1Q9ULK2 861 aaPredicted RBP-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 NOVA2Q9UNW9 492 aaKnown RBP-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 ZKSCAN5Q9Y2L8 839 aa-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 PCDHGA10Q9Y5H3 936 aa-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 SMAD5-AS1Q9Y6J3 95 aa-0.33□□□□□ -2.46
CDKL5-210ENST00000636046 NPEPPSL1A6NEC2 478 aa-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 DNAJC9-AS1A6NH13 148 aa-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 C3orf80F5H4A9 247 aa-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 F8W735 103 aaPredicted RBP-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 PLSCR1O15162 318 aa-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 SOX12O15370 315 aa-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 LILRB5O75023 590 aa-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 FMNL1O95466 1100 aaPredicted RBP-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 EYA4O95677 639 aa-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 F13BP05160 661 aa-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 CELA3AP09093 270 aa-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 HNRNPA1P09651 372 aaKnown RBP eCLIP-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 CD8BP10966 210 aa-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 VARSP26640 1264 aaKnown RBP-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 KCNC1P48547 511 aa-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 CXCR3P49682 368 aa-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 ZNF81P51508 661 aa-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 XGP55808 180 aa-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 PRSS12P56730 875 aa-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 SH3BP2P78314 561 aa-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 DDR1Q08345 913 aa-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 FOXE3Q13461 319 aa-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 RAPGEF1Q13905 1077 aa-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 PUS10Q3MIT2 529 aaKnown RBP-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 SPDYAQ5MJ70 313 aa-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 KIAA1161Q6NSJ0 714 aa-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 C15orf39Q6ZRI6 1047 aa-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 Q6ZS46 218 aa-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 BEND4Q6ZU67 534 aa-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 ZNF605Q86T29 641 aa-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 HAPLN4Q86UW8 402 aa-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 ADGRG3Q86Y34 549 aa-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 DMRTC2Q8IXT2 367 aaPredicted RBP-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 MIER1Q8N108 512 aa-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 SERBP1Q8NC51 408 aaKnown RBP eCLIP-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 DDX1Q92499 740 aaKnown RBP-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 THAP11Q96EK4 314 aa-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 UBL7Q96S82 380 aaPredicted RBP-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 METTL22Q9BUU2 404 aaPredicted RBP-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 KCNF1Q9H3M0 494 aa-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 RIOX1Q9H6W3 641 aa-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 MLXIPLQ9NP71 852 aa-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 SEMA5BQ9P283 1151 aa-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 ZC3H7BQ9UGR2 993 aaKnown RBP-0.34□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms