RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 KLRK1P26718 216 aa19.22■□□□□ 0.67
CLN6-211ENST00000635754 IL15P40933 162 aaPredicted RBP19.22■□□□□ 0.67
CLN6-211ENST00000635754 VGLL2Q8N8G2 317 aa19.22■□□□□ 0.67
CLN6-211ENST00000635754 GJA3Q9Y6H8 435 aa19.22■□□□□ 0.67
CLN6-211ENST00000635754 SCN9AQ15858 1988 aa19.21■□□□□ 0.67
CLN6-211ENST00000635754 YDJCA8MPS7 323 aa19.21■□□□□ 0.67
CLN6-211ENST00000635754 CXCL9Q07325 125 aa19.21■□□□□ 0.67
CLN6-211ENST00000635754 TNIP1Q15025 636 aa19.21■□□□□ 0.67
CLN6-211ENST00000635754 CIAPIN1Q6FI81 312 aa19.21■□□□□ 0.67
CLN6-211ENST00000635754 C15orf52Q6ZUT6 534 aaKnown RBP19.21■□□□□ 0.67
CLN6-211ENST00000635754 TXNRD3Q86VQ6 643 aa19.21■□□□□ 0.67
CLN6-211ENST00000635754 COA1Q9GZY4 146 aa19.21■□□□□ 0.67
CLN6-211ENST00000635754 CEP126Q9P2H0 1117 aa19.21■□□□□ 0.67
CLN6-211ENST00000635754 SCN4AP35499 1836 aa19.2■□□□□ 0.66
CLN6-211ENST00000635754 RAD17O75943 681 aa19.2■□□□□ 0.66
CLN6-211ENST00000635754 PUM3Q15397 648 aaKnown RBP19.2■□□□□ 0.66
CLN6-211ENST00000635754 ZNF804AQ7Z570 1209 aa19.2■□□□□ 0.66
CLN6-211ENST00000635754 PODNQ7Z5L7 613 aa19.2■□□□□ 0.66
CLN6-211ENST00000635754 RPAP2Q8IXW5 612 aaPredicted RBP19.2■□□□□ 0.66
CLN6-211ENST00000635754 NMRK2Q9NPI5 230 aa19.2■□□□□ 0.66
CLN6-211ENST00000635754 SUPT16HQ9Y5B9 1047 aaKnown RBP19.2■□□□□ 0.66
CLN6-211ENST00000635754 G3BP1Q13283 466 aaKnown RBP eCLIP19.19■□□□□ 0.66
CLN6-211ENST00000635754 L3MBTL3Q96JM7 780 aaPredicted RBP19.19■□□□□ 0.66
CLN6-211ENST00000635754 IRS2Q9Y4H2 1338 aa19.19■□□□□ 0.66
CLN6-211ENST00000635754 HMMRO75330 724 aa19.18■□□□□ 0.66
CLN6-211ENST00000635754 RRAGCQ9HB90 399 aa19.18■□□□□ 0.66
CLN6-211ENST00000635754 IFIT1P09914 478 aaKnown RBP19.17■□□□□ 0.66
CLN6-211ENST00000635754 SLC5A1P13866 664 aa19.17■□□□□ 0.66
CLN6-211ENST00000635754 OS9Q13438 667 aaPredicted RBP19.17■□□□□ 0.66
CLN6-211ENST00000635754 LPIN2Q92539 896 aa19.17■□□□□ 0.66
CLN6-211ENST00000635754 ARAP2Q8WZ64 1704 aa19.17■□□□□ 0.66
CLN6-211ENST00000635754 IQCA1LA6NCM1 817 aa19.17■□□□□ 0.66
CLN6-211ENST00000635754 PSMD14O00487 310 aa19.17■□□□□ 0.66
CLN6-211ENST00000635754 SURF6O75683 361 aaKnown RBP19.17■□□□□ 0.66
CLN6-211ENST00000635754 VEGFAP15692 232 aaPredicted RBP19.17■□□□□ 0.66
CLN6-211ENST00000635754 FGFR2P21802 821 aa19.17■□□□□ 0.66
CLN6-211ENST00000635754 ATP2B3Q16720 1220 aa19.17■□□□□ 0.66
CLN6-211ENST00000635754 CRBNQ96SW2 442 aa19.17■□□□□ 0.66
CLN6-211ENST00000635754 LMOD1P29536 600 aaPredicted RBP19.16■□□□□ 0.66
CLN6-211ENST00000635754 GYG1P46976 350 aa19.16■□□□□ 0.66
CLN6-211ENST00000635754 CAVIN4Q5BKX8 364 aa19.16■□□□□ 0.66
CLN6-211ENST00000635754 VPS37DQ86XT2 251 aa19.16■□□□□ 0.66
CLN6-211ENST00000635754 CD209Q9NNX6 404 aa19.16■□□□□ 0.66
CLN6-211ENST00000635754 KCNQ5Q9NR82 932 aa19.16■□□□□ 0.66
CLN6-211ENST00000635754 ZNF646O15015 1829 aaPredicted RBP19.15■□□□□ 0.66
CLN6-211ENST00000635754 USP17L3A6NCW0 530 aa19.15■□□□□ 0.66
CLN6-211ENST00000635754 USP17L4A6NCW7 530 aa19.15■□□□□ 0.66
CLN6-211ENST00000635754 HIBADHP31937 336 aaKnown RBP19.15■□□□□ 0.66
CLN6-211ENST00000635754 TFCP2Q12800 502 aa19.15■□□□□ 0.66
CLN6-211ENST00000635754 USP17L1Q7RTZ2 530 aa19.15■□□□□ 0.66
CLN6-211ENST00000635754 FAM84BQ96KN1 310 aaPredicted RBP19.15■□□□□ 0.66
CLN6-211ENST00000635754 AKAP2Q9Y2D5 859 aa19.15■□□□□ 0.66
CLN6-211ENST00000635754 NOP58Q9Y2X3 529 aaKnown RBP19.15■□□□□ 0.66
CLN6-211ENST00000635754 KIF3CO14782 793 aa19.14■□□□□ 0.65
CLN6-211ENST00000635754 GMPSP49915 693 aaPredicted RBP19.14■□□□□ 0.65
CLN6-211ENST00000635754 SCNN1DP51172 638 aa19.14■□□□□ 0.65
CLN6-211ENST00000635754 SIRT2Q8IXJ6 389 aa19.14■□□□□ 0.65
CLN6-211ENST00000635754 C16orf71Q8IYS4 520 aaPredicted RBP19.14■□□□□ 0.65
CLN6-211ENST00000635754 FBXW7Q969H0 707 aa19.14■□□□□ 0.65
CLN6-211ENST00000635754 HACL1Q9UJ83 578 aa19.14■□□□□ 0.65
CLN6-211ENST00000635754 MYH13Q9UKX3 1938 aa19.14■□□□□ 0.65
CLN6-211ENST00000635754 POTECB2RU33 542 aa19.13■□□□□ 0.65
CLN6-211ENST00000635754 VIL1P09327 827 aaKnown RBP19.13■□□□□ 0.65
CLN6-211ENST00000635754 IL1R1P14778 569 aa19.13■□□□□ 0.65
CLN6-211ENST00000635754 RPS12P25398 132 aaKnown RBP19.13■□□□□ 0.65
CLN6-211ENST00000635754 HSP90AB4PQ58FF6 505 aa19.13■□□□□ 0.65
CLN6-211ENST00000635754 ZNF609O15014 1411 aa19.13■□□□□ 0.65
CLN6-211ENST00000635754 SASH1O94885 1247 aa19.12■□□□□ 0.65
CLN6-211ENST00000635754 STRIP1Q5VSL9 837 aa19.12■□□□□ 0.65
CLN6-211ENST00000635754 RSBN1LQ6PCB5 846 aaPredicted RBP19.12■□□□□ 0.65
CLN6-211ENST00000635754 GPRC5DQ9NZD1 345 aa19.12■□□□□ 0.65
CLN6-211ENST00000635754 EXOC6BQ9Y2D4 811 aa19.12■□□□□ 0.65
CLN6-211ENST00000635754 ZBTB12Q9Y330 459 aaPredicted RBP19.12■□□□□ 0.65
CLN6-211ENST00000635754 A0A1B0GUL7 405 aa19.11■□□□□ 0.65
CLN6-211ENST00000635754 GTF2IP78347 998 aa19.11■□□□□ 0.65
CLN6-211ENST00000635754 TTLL5Q6EMB2 1281 aa19.11■□□□□ 0.65
CLN6-211ENST00000635754 FBXO33Q7Z6M2 555 aa19.11■□□□□ 0.65
CLN6-211ENST00000635754 ERC1Q8IUD2 1116 aa19.11■□□□□ 0.65
CLN6-211ENST00000635754 DPF2Q92785 391 aa19.11■□□□□ 0.65
CLN6-211ENST00000635754 MYO3BQ8WXR4 1341 aa19.11■□□□□ 0.65
CLN6-211ENST00000635754 FRAT2O75474 233 aaPredicted RBP19.1■□□□□ 0.65
CLN6-211ENST00000635754 EPHX2P34913 555 aa19.1■□□□□ 0.65
CLN6-211ENST00000635754 BCAMP50895 628 aa19.1■□□□□ 0.65
CLN6-211ENST00000635754 AAMPQ13685 434 aa19.1■□□□□ 0.65
CLN6-211ENST00000635754 DACT2Q5SW24 774 aa19.1■□□□□ 0.65
CLN6-211ENST00000635754 AGBL3Q8NEM8 1001 aa19.1■□□□□ 0.65
CLN6-211ENST00000635754 TDRD7Q8NHU6 1098 aaKnown RBP19.1■□□□□ 0.65
CLN6-211ENST00000635754 TAF1DQ9H5J8 278 aaPredicted RBP19.1■□□□□ 0.65
CLN6-211ENST00000635754 EPS15P42566 896 aa19.09■□□□□ 0.65
CLN6-211ENST00000635754 TIMM10P62072 90 aa19.09■□□□□ 0.65
CLN6-211ENST00000635754 GPR108Q9NPR9 543 aa19.09■□□□□ 0.65
CLN6-211ENST00000635754 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.09■□□□□ 0.65
CLN6-211ENST00000635754 PNMA8AQ86V59 439 aaPredicted RBP19.08■□□□□ 0.65
CLN6-211ENST00000635754 MICALL2Q8IY33 904 aa19.08■□□□□ 0.65
CLN6-211ENST00000635754 NEUROD6Q96NK8 337 aa19.08■□□□□ 0.65
CLN6-211ENST00000635754 GNL3LQ9NVN8 582 aaKnown RBP19.08■□□□□ 0.65
CLN6-211ENST00000635754 CNOT7Q9UIV1 285 aaKnown RBP19.08■□□□□ 0.65
CLN6-211ENST00000635754 IQSEC3Q9UPP2 1182 aaPredicted RBP19.08■□□□□ 0.65
CLN6-211ENST00000635754 H7C1D1 291 aa19.08■□□□□ 0.64
CLN6-211ENST00000635754 TOMM70O94826 608 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms