RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 MAFBQ9Y5Q3 323 aaPredicted RBP7.02□□□□□ -1.29
VBP1-204ENST00000625964 GTF3C3Q9Y5Q9 886 aa7.02□□□□□ -1.29
VBP1-204ENST00000625964 PREPP48147 710 aa7.01□□□□□ -1.29
VBP1-204ENST00000625964 CRTC2Q53ET0 693 aaPredicted RBP7.01□□□□□ -1.29
VBP1-204ENST00000625964 FAM13BQ9NYF5 915 aa7.01□□□□□ -1.29
VBP1-204ENST00000625964 LGR5O75473 907 aa7.01□□□□□ -1.29
VBP1-204ENST00000625964 CLUAP1Q96AJ1 413 aa7.01□□□□□ -1.29
VBP1-204ENST00000625964 MFSD14AQ96MC6 490 aa7.01□□□□□ -1.29
VBP1-204ENST00000625964 CARD10Q9BWT7 1032 aa7.01□□□□□ -1.29
VBP1-204ENST00000625964 ADAM19Q9H013 955 aa7.01□□□□□ -1.29
VBP1-204ENST00000625964 OSGEPQ9NPF4 335 aa7.01□□□□□ -1.29
VBP1-204ENST00000625964 USP17L15C9J2P7 530 aa7□□□□□ -1.29
VBP1-204ENST00000625964 USP17L10C9JJH3 530 aa7□□□□□ -1.29
VBP1-204ENST00000625964 USP17L13C9JLJ4 530 aa7□□□□□ -1.29
VBP1-204ENST00000625964 USP17L12C9JPN9 530 aa7□□□□□ -1.29
VBP1-204ENST00000625964 USP17L11C9JVI0 530 aa7□□□□□ -1.29
VBP1-204ENST00000625964 USP17L21D6R901 530 aa7□□□□□ -1.29
VBP1-204ENST00000625964 USP17L18D6R9N7 530 aa7□□□□□ -1.29
VBP1-204ENST00000625964 USP17L22D6RA61 530 aa7□□□□□ -1.29
VBP1-204ENST00000625964 USP17L17D6RBQ6 530 aa7□□□□□ -1.29
VBP1-204ENST00000625964 USP17L19D6RCP7 530 aa7□□□□□ -1.29
VBP1-204ENST00000625964 USP17L20D6RJB6 530 aa7□□□□□ -1.29
VBP1-204ENST00000625964 PTPRAP18433 802 aa7□□□□□ -1.29
VBP1-204ENST00000625964 ATP11AP98196 1134 aa7□□□□□ -1.29
VBP1-204ENST00000625964 USP17L24Q0WX57 530 aa7□□□□□ -1.29
VBP1-204ENST00000625964 FDX2Q6P4F2 183 aa7□□□□□ -1.29
VBP1-204ENST00000625964 UBASH3BQ8TF42 649 aa7□□□□□ -1.29
VBP1-204ENST00000625964 KLHDC7BQ96G42 594 aa7□□□□□ -1.29
VBP1-204ENST00000625964 OSBPL1AQ9BXW6 950 aa7□□□□□ -1.29
VBP1-204ENST00000625964 GAS2O43903 313 aaKnown RBP6.99□□□□□ -1.29
VBP1-204ENST00000625964 ADAM11O75078 769 aa6.99□□□□□ -1.29
VBP1-204ENST00000625964 KIF4AO95239 1232 aa6.99□□□□□ -1.29
VBP1-204ENST00000625964 PIP4K2BP78356 416 aa6.99□□□□□ -1.29
VBP1-204ENST00000625964 TP53INP2Q8IXH6 220 aa6.99□□□□□ -1.29
VBP1-204ENST00000625964 AGBL5Q8NDL9 886 aa6.99□□□□□ -1.29
VBP1-204ENST00000625964 METTL22Q9BUU2 404 aaPredicted RBP6.99□□□□□ -1.29
VBP1-204ENST00000625964 PBX4Q9BYU1 374 aa6.99□□□□□ -1.29
VBP1-204ENST00000625964 MEGF11A6BM72 1044 aa6.98□□□□□ -1.29
VBP1-204ENST00000625964 DDX3YO15523 660 aaKnown RBP6.98□□□□□ -1.29
VBP1-204ENST00000625964 MAP4P27816 1152 aaKnown RBP6.98□□□□□ -1.29
VBP1-204ENST00000625964 CABP4P57796 275 aa6.98□□□□□ -1.29
VBP1-204ENST00000625964 KANK4Q5T7N3 995 aaPredicted RBP6.98□□□□□ -1.29
VBP1-204ENST00000625964 COL13A1Q5TAT6 717 aaPredicted RBP6.98□□□□□ -1.29
VBP1-204ENST00000625964 TTC39BQ5VTQ0 682 aaPredicted RBP6.98□□□□□ -1.29
VBP1-204ENST00000625964 RUSC1Q9BVN2 902 aa6.98□□□□□ -1.29
VBP1-204ENST00000625964 RASSF4Q9H2L5 321 aa6.98□□□□□ -1.29
VBP1-204ENST00000625964 FNDC3AQ9Y2H6 1198 aaKnown RBP6.98□□□□□ -1.29
VBP1-204ENST00000625964 UBAP1LF5GYI3 381 aa6.97□□□□□ -1.29
VBP1-204ENST00000625964 H3BRJ5 948 aa6.97□□□□□ -1.29
VBP1-204ENST00000625964 F13BP05160 661 aa6.97□□□□□ -1.29
VBP1-204ENST00000625964 EPHA1P21709 976 aa6.97□□□□□ -1.29
VBP1-204ENST00000625964 BRD2P25440 801 aaKnown RBP6.97□□□□□ -1.29
VBP1-204ENST00000625964 CDC25BP30305 580 aa6.97□□□□□ -1.29
VBP1-204ENST00000625964 SCNN1AP37088 669 aa6.97□□□□□ -1.29
VBP1-204ENST00000625964 TRIP4Q15650 581 aaPredicted RBP6.97□□□□□ -1.29
VBP1-204ENST00000625964 COX20Q5RI15 118 aa6.97□□□□□ -1.29
VBP1-204ENST00000625964 PROSER2Q86WR7 435 aaPredicted RBP6.97□□□□□ -1.29
VBP1-204ENST00000625964 PIK3R5Q8WYR1 880 aa6.97□□□□□ -1.29
VBP1-204ENST00000625964 BSDC1Q9NW68 430 aaPredicted RBP6.97□□□□□ -1.29
VBP1-204ENST00000625964 VRTNQ9H8Y1 702 aa6.96□□□□□ -1.29
VBP1-204ENST00000625964 SH2B1Q9NRF2 756 aaPredicted RBP6.96□□□□□ -1.29
VBP1-204ENST00000625964 FBLN7Q53RD9 439 aa6.96□□□□□ -1.3
VBP1-204ENST00000625964 NFXL1Q6ZNB6 911 aa6.95□□□□□ -1.3
VBP1-204ENST00000625964 ETFBKMTQ8IXQ9 262 aa6.95□□□□□ -1.3
VBP1-204ENST00000625964 ARXQ96QS3 562 aa6.95□□□□□ -1.3
VBP1-204ENST00000625964 RXRBP28702 533 aa6.94□□□□□ -1.3
VBP1-204ENST00000625964 ARL4DP49703 201 aa6.94□□□□□ -1.3
VBP1-204ENST00000625964 ADAMTSL4Q6UY14 1074 aa6.94□□□□□ -1.3
VBP1-204ENST00000625964 FBXL6Q8N531 539 aa6.94□□□□□ -1.3
VBP1-204ENST00000625964 CEP120Q8N960 986 aa6.94□□□□□ -1.3
VBP1-204ENST00000625964 A6NJR5 290 aa6.93□□□□□ -1.3
VBP1-204ENST00000625964 DBX1A6NMT0 343 aa6.93□□□□□ -1.3
VBP1-204ENST00000625964 CYP26A1O43174 497 aa6.93□□□□□ -1.3
VBP1-204ENST00000625964 SGO2Q562F6 1265 aa6.93□□□□□ -1.3
VBP1-204ENST00000625964 LCE4AQ5TA78 99 aa6.93□□□□□ -1.3
VBP1-204ENST00000625964 PAOXQ6QHF9 649 aa6.93□□□□□ -1.3
VBP1-204ENST00000625964 GLMNQ92990 594 aa6.93□□□□□ -1.3
VBP1-204ENST00000625964 COL26A1Q96A83 441 aa6.93□□□□□ -1.3
VBP1-204ENST00000625964 POP1Q99575 1024 aaKnown RBP6.93□□□□□ -1.3
VBP1-204ENST00000625964 ABI2Q9NYB9 513 aaPredicted RBP6.93□□□□□ -1.3
VBP1-204ENST00000625964 FAM95CA0A1B0GW59 222 aa6.92□□□□□ -1.3
VBP1-204ENST00000625964 NCAPG2Q86XI2 1143 aa6.92□□□□□ -1.3
VBP1-204ENST00000625964 SMG8Q8ND04 991 aaKnown RBP6.92□□□□□ -1.3
VBP1-204ENST00000625964 PPP1R12CQ9BZL4 782 aa6.92□□□□□ -1.3
VBP1-204ENST00000625964 ZMYND15Q9H091 742 aa6.92□□□□□ -1.3
VBP1-204ENST00000625964 SUGCTQ9HAC7 445 aa6.92□□□□□ -1.3
VBP1-204ENST00000625964 COL19A1Q14993 1142 aa6.91□□□□□ -1.3
VBP1-204ENST00000625964 NUTM2GQ5VZR2 741 aa6.91□□□□□ -1.3
VBP1-204ENST00000625964 FNBP4Q8N3X1 1017 aaPredicted RBP6.91□□□□□ -1.3
VBP1-204ENST00000625964 FLCNQ8NFG4 579 aa6.91□□□□□ -1.3
VBP1-204ENST00000625964 FAM200AQ8TCP9 573 aa6.91□□□□□ -1.3
VBP1-204ENST00000625964 CYP4F12Q9HCS2 524 aa6.91□□□□□ -1.3
VBP1-204ENST00000625964 BIN1O00499 593 aa6.91□□□□□ -1.3
VBP1-204ENST00000625964 NLRP12P59046 1061 aa6.91□□□□□ -1.3
VBP1-204ENST00000625964 C16orf46Q6P387 395 aa6.91□□□□□ -1.3
VBP1-204ENST00000625964 C12orf50Q8NA57 414 aaPredicted RBP6.91□□□□□ -1.3
VBP1-204ENST00000625964 NFKBIBQ15653 356 aa6.9□□□□□ -1.31
VBP1-204ENST00000625964 TMPRSS13Q9BYE2 586 aa6.9□□□□□ -1.31
VBP1-204ENST00000625964 PAK6Q9NQU5 681 aaPredicted RBP6.9□□□□□ -1.31
VBP1-204ENST00000625964 TIAF1O95411 115 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms