RNA–Protein interactions for RNA: ENST00000624822.1

LINC01560-202, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

Gene LINC01560, Length 1,238 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-202ENST00000624822 DUOX1Q9NRD9 1551 aa11.97□□□□□ -0.49
LINC01560-202ENST00000624822 SNED1Q8TER0 1413 aa11.97□□□□□ -0.49
LINC01560-202ENST00000624822 C6orf229H3BNL8 230 aa11.97□□□□□ -0.49
LINC01560-202ENST00000624822 GNAI3P08754 354 aa11.97□□□□□ -0.49
LINC01560-202ENST00000624822 IARSP41252 1262 aaKnown RBP11.97□□□□□ -0.49
LINC01560-202ENST00000624822 PRELPP51888 382 aa11.97□□□□□ -0.49
LINC01560-202ENST00000624822 PDAP1Q13442 181 aaKnown RBP11.97□□□□□ -0.49
LINC01560-202ENST00000624822 SUPT20HQ8NEM7 779 aa11.97□□□□□ -0.49
LINC01560-202ENST00000624822 ZNF526Q8TF50 670 aaPredicted RBP11.97□□□□□ -0.49
LINC01560-202ENST00000624822 PPIP5K2O43314 1243 aa11.96□□□□□ -0.49
LINC01560-202ENST00000624822 GPSM2P81274 684 aa11.96□□□□□ -0.49
LINC01560-202ENST00000624822 LARGE2Q8N3Y3 721 aa11.96□□□□□ -0.49
LINC01560-202ENST00000624822 PANK1Q8TE04 598 aa11.96□□□□□ -0.49
LINC01560-202ENST00000624822 JDP2Q8WYK2 163 aa11.96□□□□□ -0.49
LINC01560-202ENST00000624822 KAZALD1Q96I82 304 aa11.96□□□□□ -0.49
LINC01560-202ENST00000624822 ZNF594Q96JF6 807 aaPredicted RBP11.96□□□□□ -0.49
LINC01560-202ENST00000624822 BSDC1Q9NW68 430 aaPredicted RBP11.96□□□□□ -0.49
LINC01560-202ENST00000624822 LRRFIP2Q9Y608 721 aaKnown RBP11.96□□□□□ -0.49
LINC01560-202ENST00000624822 XDHP47989 1333 aa11.95□□□□□ -0.5
LINC01560-202ENST00000624822 UFL1O94874 794 aa11.95□□□□□ -0.5
LINC01560-202ENST00000624822 RLBP1P12271 317 aa11.95□□□□□ -0.5
LINC01560-202ENST00000624822 AOC3Q16853 763 aa11.95□□□□□ -0.5
LINC01560-202ENST00000624822 ANKRD44Q8N8A2 993 aa11.95□□□□□ -0.5
LINC01560-202ENST00000624822 CNNM1Q9NRU3 951 aa11.95□□□□□ -0.5
LINC01560-202ENST00000624822 G3V3G9 751 aa11.94□□□□□ -0.5
LINC01560-202ENST00000624822 RIMBP2O15034 1052 aa11.94□□□□□ -0.5
LINC01560-202ENST00000624822 GNAI2P04899 355 aa11.94□□□□□ -0.5
LINC01560-202ENST00000624822 WASHC4Q2M389 1173 aa11.94□□□□□ -0.5
LINC01560-202ENST00000624822 RABL6Q3YEC7 729 aaPredicted RBP11.94□□□□□ -0.5
LINC01560-202ENST00000624822 DPY19L2Q6NUT2 758 aa11.94□□□□□ -0.5
LINC01560-202ENST00000624822 LDHAL6AQ6ZMR3 332 aa11.94□□□□□ -0.5
LINC01560-202ENST00000624822 NIM1KQ8IY84 436 aa11.94□□□□□ -0.5
LINC01560-202ENST00000624822 EYA3Q99504 573 aa11.94□□□□□ -0.5
LINC01560-202ENST00000624822 GGA1Q9UJY5 639 aa11.94□□□□□ -0.5
LINC01560-202ENST00000624822 MINPP1Q9UNW1 487 aa11.94□□□□□ -0.5
LINC01560-202ENST00000624822 ZC3H4Q9UPT8 1303 aaKnown RBP11.93□□□□□ -0.5
LINC01560-202ENST00000624822 KCNJ4P48050 445 aa11.93□□□□□ -0.5
LINC01560-202ENST00000624822 CHRNDQ07001 517 aa11.93□□□□□ -0.5
LINC01560-202ENST00000624822 ZNF784Q8NCA9 323 aaPredicted RBP11.93□□□□□ -0.5
LINC01560-202ENST00000624822 TBC1D16Q8TBP0 767 aa11.93□□□□□ -0.5
LINC01560-202ENST00000624822 GPR101Q96P66 508 aaPredicted RBP11.93□□□□□ -0.5
LINC01560-202ENST00000624822 RTFDC1Q9BY42 306 aaPredicted RBP11.93□□□□□ -0.5
LINC01560-202ENST00000624822 ANKRD2Q9GZV1 360 aa11.93□□□□□ -0.5
LINC01560-202ENST00000624822 GPBP1L1Q9HC44 474 aaPredicted RBP11.93□□□□□ -0.5
LINC01560-202ENST00000624822 PODXL2Q9NZ53 605 aa11.93□□□□□ -0.5
LINC01560-202ENST00000624822 POLLQ9UGP5 575 aa11.93□□□□□ -0.5
LINC01560-202ENST00000624822 COG6Q9Y2V7 657 aa11.93□□□□□ -0.5
LINC01560-202ENST00000624822 MYH13Q9UKX3 1938 aa11.93□□□□□ -0.5
LINC01560-202ENST00000624822 COL4A5P29400 1685 aa11.93□□□□□ -0.5
LINC01560-202ENST00000624822 PSME4Q14997 1843 aa11.93□□□□□ -0.5
LINC01560-202ENST00000624822 KDM2BQ8NHM5 1336 aa11.92□□□□□ -0.5
LINC01560-202ENST00000624822 ATP2B4P23634 1241 aa11.92□□□□□ -0.5
LINC01560-202ENST00000624822 EIF6P56537 245 aaKnown RBP11.92□□□□□ -0.5
LINC01560-202ENST00000624822 KIAA2012Q0VF49 1180 aa11.92□□□□□ -0.5
LINC01560-202ENST00000624822 MVPQ14764 893 aaKnown RBP11.92□□□□□ -0.5
LINC01560-202ENST00000624822 HELBQ8NG08 1087 aaPredicted RBP11.92□□□□□ -0.5
LINC01560-202ENST00000624822 KLHDC4Q8TBB5 520 aa11.92□□□□□ -0.5
LINC01560-202ENST00000624822 ZC3H12CQ9C0D7 883 aaKnown RBP11.92□□□□□ -0.5
LINC01560-202ENST00000624822 VPS33BQ9H267 617 aa11.92□□□□□ -0.5
LINC01560-202ENST00000624822 C1orf115Q9H7X2 142 aa11.92□□□□□ -0.5
LINC01560-202ENST00000624822 SRGAP3O43295 1099 aa11.91□□□□□ -0.5
LINC01560-202ENST00000624822 TAF5LO75529 589 aa11.91□□□□□ -0.5
LINC01560-202ENST00000624822 PUS3Q9BZE2 481 aaKnown RBP11.91□□□□□ -0.5
LINC01560-202ENST00000624822 SIL1Q9H173 461 aa11.91□□□□□ -0.5
LINC01560-202ENST00000624822 DDX19BQ9UMR2 479 aa11.91□□□□□ -0.5
LINC01560-202ENST00000624822 WDR90Q96KV7 1748 aa11.91□□□□□ -0.5
LINC01560-202ENST00000624822 SCN4AP35499 1836 aa11.9□□□□□ -0.5
LINC01560-202ENST00000624822 ZNF804BA4D1E1 1349 aa11.9□□□□□ -0.5
LINC01560-202ENST00000624822 GLTPD2A6NH11 291 aa11.9□□□□□ -0.5
LINC01560-202ENST00000624822 ZBTB7BO15156 539 aaPredicted RBP11.9□□□□□ -0.5
LINC01560-202ENST00000624822 RRP1P56182 461 aaKnown RBP11.9□□□□□ -0.5
LINC01560-202ENST00000624822 DOK7Q18PE1 504 aa11.9□□□□□ -0.5
LINC01560-202ENST00000624822 LRRC24Q50LG9 513 aa11.9□□□□□ -0.5
LINC01560-202ENST00000624822 METTL24Q5JXM2 366 aa11.9□□□□□ -0.5
LINC01560-202ENST00000624822 C20orf194Q5TEA3 1177 aa11.9□□□□□ -0.5
LINC01560-202ENST00000624822 L3MBTL3Q96JM7 780 aaPredicted RBP11.9□□□□□ -0.5
LINC01560-202ENST00000624822 DBNDD1Q9H9R9 158 aa11.9□□□□□ -0.5
LINC01560-202ENST00000624822 LEMD3Q9Y2U8 911 aa11.9□□□□□ -0.5
LINC01560-202ENST00000624822 GJA3Q9Y6H8 435 aa11.9□□□□□ -0.5
LINC01560-202ENST00000624822 SCN9AQ15858 1988 aa11.9□□□□□ -0.5
LINC01560-202ENST00000624822 MROH5Q6ZUA9 1318 aa11.89□□□□□ -0.51
LINC01560-202ENST00000624822 ZNF541Q9H0D2 1346 aa11.89□□□□□ -0.51
LINC01560-202ENST00000624822 ECE2O60344 883 aa11.89□□□□□ -0.51
LINC01560-202ENST00000624822 DDNO94850 711 aaPredicted RBP11.89□□□□□ -0.51
LINC01560-202ENST00000624822 PDE3AQ14432 1141 aa11.89□□□□□ -0.51
LINC01560-202ENST00000624822 CHMP4BQ9H444 224 aaKnown RBP11.89□□□□□ -0.51
LINC01560-202ENST00000624822 ZNRF3Q9ULT6 936 aa11.89□□□□□ -0.51
LINC01560-202ENST00000624822 PA2G4Q9UQ80 394 aaKnown RBP11.89□□□□□ -0.51
LINC01560-202ENST00000624822 MED23Q9ULK4 1368 aa11.89□□□□□ -0.51
LINC01560-202ENST00000624822 WTIPA6NIX2 430 aaPredicted RBP11.88□□□□□ -0.51
LINC01560-202ENST00000624822 FZD9O00144 591 aa11.88□□□□□ -0.51
LINC01560-202ENST00000624822 RFX5P48382 616 aaPredicted RBP11.88□□□□□ -0.51
LINC01560-202ENST00000624822 PTPN12Q05209 780 aaKnown RBP11.88□□□□□ -0.51
LINC01560-202ENST00000624822 MARVELD3Q96A59 401 aa11.88□□□□□ -0.51
LINC01560-202ENST00000624822 RRAGCQ9HB90 399 aa11.88□□□□□ -0.51
LINC01560-202ENST00000624822 ARAP2Q8WZ64 1704 aa11.87□□□□□ -0.51
LINC01560-202ENST00000624822 PNMA6EA0A0J9YXQ4 647 aa11.87□□□□□ -0.51
LINC01560-202ENST00000624822 SNAP23O00161 211 aa11.87□□□□□ -0.51
LINC01560-202ENST00000624822 EYA2O00167 538 aa11.87□□□□□ -0.51
LINC01560-202ENST00000624822 RAD17O75943 681 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms