RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 LEMD3Q9Y2U8 911 aa21.75■■□□□ 1.07
PTCHD3-202ENST00000622555 LTBP1Q14766 1721 aa21.74■■□□□ 1.07
PTCHD3-202ENST00000622555 OLFM4Q6UX06 510 aa21.74■■□□□ 1.07
PTCHD3-202ENST00000622555 BOLA2Q9H3K6 86 aa21.74■■□□□ 1.07
PTCHD3-202ENST00000622555 UFL1O94874 794 aa21.73■■□□□ 1.07
PTCHD3-202ENST00000622555 PODXL2Q9NZ53 605 aa21.73■■□□□ 1.07
PTCHD3-202ENST00000622555 ZNF219Q9P2Y4 722 aaPredicted RBP21.73■■□□□ 1.07
PTCHD3-202ENST00000622555 GGA1Q9UJY5 639 aa21.73■■□□□ 1.07
PTCHD3-202ENST00000622555 BRCA1P38398 1863 aaKnown RBP21.73■■□□□ 1.07
PTCHD3-202ENST00000622555 TRIM6-TRIM34B2RNG4 842 aa21.72■■□□□ 1.07
PTCHD3-202ENST00000622555 SOCS7O14512 581 aa21.72■■□□□ 1.07
PTCHD3-202ENST00000622555 MAP4K4O95819 1239 aaPredicted RBP21.72■■□□□ 1.07
PTCHD3-202ENST00000622555 ATP2B4P23634 1241 aa21.72■■□□□ 1.07
PTCHD3-202ENST00000622555 CCDC102BQ68D86 513 aa21.72■■□□□ 1.07
PTCHD3-202ENST00000622555 SDSP20132 328 aa21.72■■□□□ 1.07
PTCHD3-202ENST00000622555 PHKA1P46020 1223 aa21.72■■□□□ 1.07
PTCHD3-202ENST00000622555 MPNDQ8N594 471 aa21.72■■□□□ 1.07
PTCHD3-202ENST00000622555 PIM2Q9P1W9 311 aa21.72■■□□□ 1.07
PTCHD3-202ENST00000622555 KLRK1P26718 216 aa21.71■■□□□ 1.07
PTCHD3-202ENST00000622555 BCAMP50895 628 aa21.71■■□□□ 1.07
PTCHD3-202ENST00000622555 CAVIN4Q5BKX8 364 aa21.71■■□□□ 1.07
PTCHD3-202ENST00000622555 GYG1P46976 350 aa21.7■■□□□ 1.06
PTCHD3-202ENST00000622555 DPP8Q6V1X1 898 aaPredicted RBP21.7■■□□□ 1.06
PTCHD3-202ENST00000622555 TBC1D16Q8TBP0 767 aa21.7■■□□□ 1.06
PTCHD3-202ENST00000622555 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.7■■□□□ 1.06
PTCHD3-202ENST00000622555 RILPL2Q969X0 211 aa21.7■■□□□ 1.06
PTCHD3-202ENST00000622555 AKAP11Q9UKA4 1901 aa21.7■■□□□ 1.06
PTCHD3-202ENST00000622555 C6orf229H3BNL8 230 aa21.69■■□□□ 1.06
PTCHD3-202ENST00000622555 UQCRFS1P1P0C7P4 283 aa21.69■■□□□ 1.06
PTCHD3-202ENST00000622555 VPS37DQ86XT2 251 aa21.69■■□□□ 1.06
PTCHD3-202ENST00000622555 C7orf43Q8WVR3 580 aa21.69■■□□□ 1.06
PTCHD3-202ENST00000622555 DNAJC2Q99543 621 aaKnown RBP21.69■■□□□ 1.06
PTCHD3-202ENST00000622555 HAUS7Q99871 368 aa21.69■■□□□ 1.06
PTCHD3-202ENST00000622555 POLLQ9UGP5 575 aa21.69■■□□□ 1.06
PTCHD3-202ENST00000622555 MYH13Q9UKX3 1938 aa21.69■■□□□ 1.06
PTCHD3-202ENST00000622555 CNTROBQ8N137 903 aa21.69■■□□□ 1.06
PTCHD3-202ENST00000622555 ZNF512BQ96KM6 892 aaPredicted RBP21.69■■□□□ 1.06
PTCHD3-202ENST00000622555 GPR101Q96P66 508 aaPredicted RBP21.69■■□□□ 1.06
PTCHD3-202ENST00000622555 DUOX1Q9NRD9 1551 aa21.68■■□□□ 1.06
PTCHD3-202ENST00000622555 C21orf2O43822 256 aa21.68■■□□□ 1.06
PTCHD3-202ENST00000622555 ARID4AP29374 1257 aaPredicted RBP21.68■■□□□ 1.06
PTCHD3-202ENST00000622555 CC2D2BQ6DHV5 1058 aa21.68■■□□□ 1.06
PTCHD3-202ENST00000622555 FAM84BQ96KN1 310 aaPredicted RBP21.68■■□□□ 1.06
PTCHD3-202ENST00000622555 WWC3Q9ULE0 1092 aa21.68■■□□□ 1.06
PTCHD3-202ENST00000622555 NDUFB9Q9Y6M9 179 aa21.68■■□□□ 1.06
PTCHD3-202ENST00000622555 IRS2Q9Y4H2 1338 aa21.68■■□□□ 1.06
PTCHD3-202ENST00000622555 SCARF1Q14162 830 aa21.67■■□□□ 1.06
PTCHD3-202ENST00000622555 DALRD3Q5D0E6 543 aaKnown RBP21.67■■□□□ 1.06
PTCHD3-202ENST00000622555 TXNRD3Q86VQ6 643 aa21.67■■□□□ 1.06
PTCHD3-202ENST00000622555 GNL3LQ9NVN8 582 aaKnown RBP21.67■■□□□ 1.06
PTCHD3-202ENST00000622555 HIBADHP31937 336 aaKnown RBP21.66■■□□□ 1.06
PTCHD3-202ENST00000622555 MCAMP43121 646 aa21.66■■□□□ 1.06
PTCHD3-202ENST00000622555 C15orf52Q6ZUT6 534 aaKnown RBP21.66■■□□□ 1.06
PTCHD3-202ENST00000622555 FBXO33Q7Z6M2 555 aa21.66■■□□□ 1.06
PTCHD3-202ENST00000622555 NLGN2Q8NFZ4 835 aa21.66■■□□□ 1.06
PTCHD3-202ENST00000622555 SNRKQ9NRH2 765 aa21.66■■□□□ 1.06
PTCHD3-202ENST00000622555 FKBP4Q02790 459 aaKnown RBP eCLIP21.66■■□□□ 1.06
PTCHD3-202ENST00000622555 EVI5LQ96CN4 794 aa21.66■■□□□ 1.06
PTCHD3-202ENST00000622555 EDC3Q96F86 508 aaKnown RBP21.66■■□□□ 1.06
PTCHD3-202ENST00000622555 MED23Q9ULK4 1368 aa21.65■■□□□ 1.06
PTCHD3-202ENST00000622555 C8orf34Q49A92 452 aa21.65■■□□□ 1.06
PTCHD3-202ENST00000622555 CCDC93Q567U6 631 aa21.65■■□□□ 1.06
PTCHD3-202ENST00000622555 PI16Q6UXB8 463 aa21.65■■□□□ 1.06
PTCHD3-202ENST00000622555 PAG1Q9NWQ8 432 aa21.65■■□□□ 1.06
PTCHD3-202ENST00000622555 IQSEC3Q9UPP2 1182 aaPredicted RBP21.65■■□□□ 1.06
PTCHD3-202ENST00000622555 GOLIM4O00461 696 aa21.64■■□□□ 1.06
PTCHD3-202ENST00000622555 CDC45O75419 566 aa21.64■■□□□ 1.06
PTCHD3-202ENST00000622555 RASGRF1Q13972 1273 aa21.64■■□□□ 1.06
PTCHD3-202ENST00000622555 ZNF804AQ7Z570 1209 aa21.64■■□□□ 1.06
PTCHD3-202ENST00000622555 FHDC1Q9C0D6 1143 aaPredicted RBP21.64■■□□□ 1.06
PTCHD3-202ENST00000622555 ZAP70P43403 619 aa21.63■■□□□ 1.05
PTCHD3-202ENST00000622555 GRIPAP1Q4V328 841 aa21.63■■□□□ 1.05
PTCHD3-202ENST00000622555 SPATA5Q8NB90 893 aa21.63■■□□□ 1.05
PTCHD3-202ENST00000622555 HMG20BQ9P0W2 317 aa21.63■■□□□ 1.05
PTCHD3-202ENST00000622555 SNED1Q8TER0 1413 aa21.63■■□□□ 1.05
PTCHD3-202ENST00000622555 RIMBP2O15034 1052 aa21.63■■□□□ 1.05
PTCHD3-202ENST00000622555 SOGA3Q5TF21 947 aa21.63■■□□□ 1.05
PTCHD3-202ENST00000622555 EYA3Q99504 573 aa21.63■■□□□ 1.05
PTCHD3-202ENST00000622555 FSD1Q9BTV5 496 aa21.63■■□□□ 1.05
PTCHD3-202ENST00000622555 FRAT2O75474 233 aaPredicted RBP21.62■■□□□ 1.05
PTCHD3-202ENST00000622555 RTKN2Q8IZC4 609 aa21.62■■□□□ 1.05
PTCHD3-202ENST00000622555 RTFDC1Q9BY42 306 aaPredicted RBP21.62■■□□□ 1.05
PTCHD3-202ENST00000622555 ZC3H12CQ9C0D7 883 aaKnown RBP21.62■■□□□ 1.05
PTCHD3-202ENST00000622555 WASHC4Q2M389 1173 aa21.61■■□□□ 1.05
PTCHD3-202ENST00000622555 TBC1D9Q6ZT07 1266 aa21.61■■□□□ 1.05
PTCHD3-202ENST00000622555 BCS1LQ9Y276 419 aa21.61■■□□□ 1.05
PTCHD3-202ENST00000622555 MYO5AQ9Y4I1 1855 aaKnown RBP21.61■■□□□ 1.05
PTCHD3-202ENST00000622555 ARFGEF1Q9Y6D6 1849 aa21.61■■□□□ 1.05
PTCHD3-202ENST00000622555 SEMA3EO15041 775 aa21.6■■□□□ 1.05
PTCHD3-202ENST00000622555 CASC1Q6TDU7 716 aa21.6■■□□□ 1.05
PTCHD3-202ENST00000622555 SUPT20HQ8NEM7 779 aa21.6■■□□□ 1.05
PTCHD3-202ENST00000622555 ANTXR1Q9H6X2 564 aa21.6■■□□□ 1.05
PTCHD3-202ENST00000622555 DENND2AQ9ULE3 1009 aa21.6■■□□□ 1.05
PTCHD3-202ENST00000622555 MYH7P12883 1935 aa21.6■■□□□ 1.05
PTCHD3-202ENST00000622555 BACH2Q9BYV9 841 aa21.6■■□□□ 1.05
PTCHD3-202ENST00000622555 COL1A1P02452 1464 aaPredicted RBP21.6■■□□□ 1.05
PTCHD3-202ENST00000622555 CYP2E1P05181 493 aaPredicted RBP21.59■■□□□ 1.05
PTCHD3-202ENST00000622555 KBTBD3Q8NAB2 608 aa21.59■■□□□ 1.05
PTCHD3-202ENST00000622555 CD209Q9NNX6 404 aa21.59■■□□□ 1.05
PTCHD3-202ENST00000622555 FER1L6Q2WGJ9 1857 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms