RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 ANGEL2Q5VTE6 544 aaKnown RBP28.24■■■□□ 2.11
SRRT-218ENST00000620394 RSBN1LQ6PCB5 846 aaPredicted RBP28.24■■■□□ 2.11
SRRT-218ENST00000620394 PITPNM2Q9BZ72 1349 aa28.23■■■□□ 2.11
SRRT-218ENST00000620394 NEURL1BA8MQ27 555 aa28.23■■■□□ 2.11
SRRT-218ENST00000620394 SLC4A2P04920 1241 aa28.23■■■□□ 2.11
SRRT-218ENST00000620394 CTSWP56202 376 aa28.23■■■□□ 2.11
SRRT-218ENST00000620394 JARID2Q92833 1246 aaPredicted RBP28.23■■■□□ 2.11
SRRT-218ENST00000620394 FLIIQ13045 1269 aa28.22■■■□□ 2.11
SRRT-218ENST00000620394 SCARF1Q14162 830 aa28.21■■■□□ 2.11
SRRT-218ENST00000620394 CWF19L2Q2TBE0 894 aaKnown RBP28.21■■■□□ 2.11
SRRT-218ENST00000620394 XDHP47989 1333 aa28.19■■■□□ 2.1
SRRT-218ENST00000620394 VAMP4O75379 141 aa28.19■■■□□ 2.1
SRRT-218ENST00000620394 TTLL11Q8NHH1 800 aa28.19■■■□□ 2.1
SRRT-218ENST00000620394 MYOZ2Q9NPC6 264 aa28.19■■■□□ 2.1
SRRT-218ENST00000620394 ZNF646O15015 1829 aaPredicted RBP28.19■■■□□ 2.1
SRRT-218ENST00000620394 USP17L8P0C7I0 530 aa28.18■■■□□ 2.1
SRRT-218ENST00000620394 ANKRD18AQ8IVF6 992 aa28.18■■■□□ 2.1
SRRT-218ENST00000620394 CCDC85AQ96PX6 553 aaPredicted RBP28.18■■■□□ 2.1
SRRT-218ENST00000620394 H7C1W4 665 aa28.17■■■□□ 2.1
SRRT-218ENST00000620394 GMLQ99445 158 aa28.17■■■□□ 2.1
SRRT-218ENST00000620394 CDC5LQ99459 802 aaKnown RBP28.17■■■□□ 2.1
SRRT-218ENST00000620394 EXOSC9Q06265 439 aaKnown RBP28.16■■■□□ 2.1
SRRT-218ENST00000620394 PLA2G12BQ9BX93 195 aa28.16■■■□□ 2.1
SRRT-218ENST00000620394 SALL2Q9Y467 1007 aaPredicted RBP28.16■■■□□ 2.1
SRRT-218ENST00000620394 FKBP5Q13451 457 aaPredicted RBP28.15■■■□□ 2.1
SRRT-218ENST00000620394 GCKRQ14397 625 aa28.15■■■□□ 2.1
SRRT-218ENST00000620394 PKN2Q16513 984 aaKnown RBP28.15■■■□□ 2.1
SRRT-218ENST00000620394 UBE3BQ7Z3V4 1068 aa28.15■■■□□ 2.1
SRRT-218ENST00000620394 PODNQ7Z5L7 613 aa28.15■■■□□ 2.1
SRRT-218ENST00000620394 DNAAF4Q8WXU2 420 aa28.15■■■□□ 2.1
SRRT-218ENST00000620394 GREM2Q9H772 168 aa28.15■■■□□ 2.1
SRRT-218ENST00000620394 SPINK5Q9NQ38 1064 aaPredicted RBP28.15■■■□□ 2.1
SRRT-218ENST00000620394 USP17L3A6NCW0 530 aa28.14■■■□□ 2.1
SRRT-218ENST00000620394 USP17L4A6NCW7 530 aa28.14■■■□□ 2.1
SRRT-218ENST00000620394 CASP7P55210 303 aa28.14■■■□□ 2.1
SRRT-218ENST00000620394 PRPF38BQ5VTL8 546 aaKnown RBP28.14■■■□□ 2.1
SRRT-218ENST00000620394 USP17L1Q7RTZ2 530 aa28.14■■■□□ 2.1
SRRT-218ENST00000620394 MED23Q9ULK4 1368 aa28.13■■■□□ 2.09
SRRT-218ENST00000620394 ATP2B4P23634 1241 aa28.13■■■□□ 2.09
SRRT-218ENST00000620394 LINS1Q8NG48 757 aa28.13■■■□□ 2.09
SRRT-218ENST00000620394 MYH16Q9H6N6 1097 aa28.13■■■□□ 2.09
SRRT-218ENST00000620394 BSDC1Q9NW68 430 aaPredicted RBP28.13■■■□□ 2.09
SRRT-218ENST00000620394 HPS5Q9UPZ3 1129 aa28.13■■■□□ 2.09
SRRT-218ENST00000620394 HDAC9Q9UKV0 1011 aa28.12■■■□□ 2.09
SRRT-218ENST00000620394 ZNF521Q96K83 1311 aa28.11■■■□□ 2.09
SRRT-218ENST00000620394 A0A1B0GUL6 1792 aa28.11■■■□□ 2.09
SRRT-218ENST00000620394 FAM9BQ8IZU0 186 aa28.1■■■□□ 2.09
SRRT-218ENST00000620394 MYO3BQ8WXR4 1341 aa28.1■■■□□ 2.09
SRRT-218ENST00000620394 NOM1Q5C9Z4 860 aaKnown RBP28.09■■■□□ 2.09
SRRT-218ENST00000620394 ZNF296Q8WUU4 475 aaPredicted RBP28.09■■■□□ 2.09
SRRT-218ENST00000620394 MINPP1Q9UNW1 487 aa28.09■■■□□ 2.09
SRRT-218ENST00000620394 NF2P35240 595 aa28.08■■■□□ 2.09
SRRT-218ENST00000620394 MOB2Q70IA6 237 aa28.08■■■□□ 2.09
SRRT-218ENST00000620394 CSF1RP07333 972 aa28.07■■■□□ 2.08
SRRT-218ENST00000620394 TTLL12Q14166 644 aaPredicted RBP28.07■■■□□ 2.08
SRRT-218ENST00000620394 OGFOD1Q8N543 542 aa28.07■■■□□ 2.08
SRRT-218ENST00000620394 UBE2Q2LH0YL09 131 aa28.06■■■□□ 2.08
SRRT-218ENST00000620394 NBPF9Q3BBW0 867 aa28.06■■■□□ 2.08
SRRT-218ENST00000620394 SCAF8Q9UPN6 1271 aaKnown RBP28.06■■■□□ 2.08
SRRT-218ENST00000620394 TBC1D8O95759 1140 aa28.05■■■□□ 2.08
SRRT-218ENST00000620394 TM4SF4P48230 202 aa28.05■■■□□ 2.08
SRRT-218ENST00000620394 SREBF2Q12772 1141 aa28.05■■■□□ 2.08
SRRT-218ENST00000620394 DACT2Q5SW24 774 aa28.05■■■□□ 2.08
SRRT-218ENST00000620394 ITGA6P23229 1130 aa28.04■■■□□ 2.08
SRRT-218ENST00000620394 IGHMBP2P38935 993 aaKnown RBP28.04■■■□□ 2.08
SRRT-218ENST00000620394 CCT4P50991 539 aaKnown RBP28.04■■■□□ 2.08
SRRT-218ENST00000620394 BEND3Q5T5X7 828 aa28.04■■■□□ 2.08
SRRT-218ENST00000620394 WNT10BO00744 389 aa28.03■■■□□ 2.08
SRRT-218ENST00000620394 MMP14P50281 582 aa28.03■■■□□ 2.08
SRRT-218ENST00000620394 LAMB1P07942 1786 aa28.03■■■□□ 2.08
SRRT-218ENST00000620394 WTIPA6NIX2 430 aaPredicted RBP28.02■■■□□ 2.08
SRRT-218ENST00000620394 F6X3S4 739 aa28.02■■■□□ 2.08
SRRT-218ENST00000620394 GPR25O00155 361 aa28.02■■■□□ 2.08
SRRT-218ENST00000620394 STRIP1Q5VSL9 837 aa28.02■■■□□ 2.08
SRRT-218ENST00000620394 PRAMEF18Q5VWM3 479 aa28.02■■■□□ 2.08
SRRT-218ENST00000620394 FBXO46Q6PJ61 603 aaPredicted RBP28.02■■■□□ 2.08
SRRT-218ENST00000620394 CFHR5Q9BXR6 569 aa28.02■■■□□ 2.08
SRRT-218ENST00000620394 COL1A1P02452 1464 aaPredicted RBP28.02■■■□□ 2.08
SRRT-218ENST00000620394 FBXW7Q969H0 707 aa28.01■■■□□ 2.07
SRRT-218ENST00000620394 COA1Q9GZY4 146 aa28.01■■■□□ 2.07
SRRT-218ENST00000620394 LEMD3Q9Y2U8 911 aa28.01■■■□□ 2.07
SRRT-218ENST00000620394 ECM29Q5VYK3 1845 aa28■■■□□ 2.07
SRRT-218ENST00000620394 APOBEC3FQ8IUX4 373 aaKnown RBP28■■■□□ 2.07
SRRT-218ENST00000620394 ARMC9Q7Z3E5 817 aa27.99■■■□□ 2.07
SRRT-218ENST00000620394 MXD3Q9BW11 206 aa27.99■■■□□ 2.07
SRRT-218ENST00000620394 ANKRD2Q9GZV1 360 aa27.99■■■□□ 2.07
SRRT-218ENST00000620394 SASH1O94885 1247 aa27.98■■■□□ 2.07
SRRT-218ENST00000620394 FOXO4P98177 505 aa27.98■■■□□ 2.07
SRRT-218ENST00000620394 MKRN3Q13064 507 aaKnown RBP27.98■■■□□ 2.07
SRRT-218ENST00000620394 MPHOSPH8Q99549 860 aa27.98■■■□□ 2.07
SRRT-218ENST00000620394 FKTNO75072 461 aa27.97■■■□□ 2.07
SRRT-218ENST00000620394 ZNF804BA4D1E1 1349 aa27.96■■■□□ 2.07
SRRT-218ENST00000620394 ANKRD18BA2A2Z9 1011 aa27.96■■■□□ 2.07
SRRT-218ENST00000620394 TXNRD3Q86VQ6 643 aa27.96■■■□□ 2.07
SRRT-218ENST00000620394 GRM8O00222 908 aa27.95■■■□□ 2.06
SRRT-218ENST00000620394 ALDH1A1P00352 501 aa27.95■■■□□ 2.06
SRRT-218ENST00000620394 PTPN12Q05209 780 aaKnown RBP27.95■■■□□ 2.06
SRRT-218ENST00000620394 ALDH1L1O75891 902 aa27.94■■■□□ 2.06
SRRT-218ENST00000620394 CHRNDQ07001 517 aa27.94■■■□□ 2.06
SRRT-218ENST00000620394 IRS2Q9Y4H2 1338 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms