RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 SMIM24O75264 130 aa16.38■□□□□ 0.21
PTPN9-206ENST00000618819 CXorf38Q8TB03 319 aa16.38■□□□□ 0.21
PTPN9-206ENST00000618819 ASIC1P78348 528 aa16.37■□□□□ 0.21
PTPN9-206ENST00000618819 VSIG1Q86XK7 387 aa16.37■□□□□ 0.21
PTPN9-206ENST00000618819 MRPS27Q92552 414 aaKnown RBP16.37■□□□□ 0.21
PTPN9-206ENST00000618819 RNF10Q8N5U6 811 aaKnown RBP16.37■□□□□ 0.21
PTPN9-206ENST00000618819 KAT14Q9H8E8 782 aa16.37■□□□□ 0.21
PTPN9-206ENST00000618819 RTL1A6NKG5 1358 aa16.37■□□□□ 0.21
PTPN9-206ENST00000618819 DDX21Q9NR30 783 aaKnown RBP eCLIP16.37■□□□□ 0.21
PTPN9-206ENST00000618819 ERCC6LQ2NKX8 1250 aa16.37■□□□□ 0.21
PTPN9-206ENST00000618819 RUFY3Q7L099 469 aa16.37■□□□□ 0.21
PTPN9-206ENST00000618819 CERS3Q8IU89 383 aa16.37■□□□□ 0.21
PTPN9-206ENST00000618819 XAB2Q9HCS7 855 aaKnown RBP16.37■□□□□ 0.21
PTPN9-206ENST00000618819 LRRC27Q9C0I9 530 aa16.37■□□□□ 0.21
PTPN9-206ENST00000618819 TCEANC2Q96MN5 208 aa16.36■□□□□ 0.21
PTPN9-206ENST00000618819 STMN1P16949 149 aa16.36■□□□□ 0.21
PTPN9-206ENST00000618819 FRMD4BQ9Y2L6 1034 aa16.36■□□□□ 0.21
PTPN9-206ENST00000618819 CABP1Q9NZU7 370 aa16.36■□□□□ 0.21
PTPN9-206ENST00000618819 ELF2Q15723 593 aa16.36■□□□□ 0.21
PTPN9-206ENST00000618819 UTP14CQ5TAP6 766 aaKnown RBP16.36■□□□□ 0.21
PTPN9-206ENST00000618819 CCDC62Q6P9F0 684 aa16.36■□□□□ 0.21
PTPN9-206ENST00000618819 KIAA1524Q8TCG1 905 aa16.36■□□□□ 0.21
PTPN9-206ENST00000618819 RAPGEF2Q9Y4G8 1499 aa16.36■□□□□ 0.21
PTPN9-206ENST00000618819 CLUL1Q15846 466 aa16.36■□□□□ 0.21
PTPN9-206ENST00000618819 AP1ARQ63HQ0 302 aa16.36■□□□□ 0.21
PTPN9-206ENST00000618819 ZNF365Q70YC5 407 aa16.36■□□□□ 0.21
PTPN9-206ENST00000618819 RPAINQ86UA6 219 aa16.36■□□□□ 0.21
PTPN9-206ENST00000618819 NEK11Q8NG66 645 aa16.36■□□□□ 0.21
PTPN9-206ENST00000618819 ANKRD24Q8TF21 1146 aa16.36■□□□□ 0.21
PTPN9-206ENST00000618819 SSH1Q8WYL5 1049 aa16.36■□□□□ 0.21
PTPN9-206ENST00000618819 MIER3Q7Z3K6 550 aa16.35■□□□□ 0.21
PTPN9-206ENST00000618819 PSMA7O14818 248 aa16.35■□□□□ 0.21
PTPN9-206ENST00000618819 TSPY2A6NKD2 308 aa16.35■□□□□ 0.21
PTPN9-206ENST00000618819 RIOK3O14730 519 aaKnown RBP16.35■□□□□ 0.21
PTPN9-206ENST00000618819 SH2D4BQ5SQS7 431 aa16.35■□□□□ 0.21
PTPN9-206ENST00000618819 EVI5LQ96CN4 794 aa16.35■□□□□ 0.21
PTPN9-206ENST00000618819 FAM212AQ96EL1 285 aa16.35■□□□□ 0.21
PTPN9-206ENST00000618819 TBC1D32Q96NH3 1257 aa16.35■□□□□ 0.21
PTPN9-206ENST00000618819 MUM1Q2TAK8 710 aa16.35■□□□□ 0.21
PTPN9-206ENST00000618819 SNRKQ9NRH2 765 aa16.35■□□□□ 0.21
PTPN9-206ENST00000618819 OPHN1O60890 802 aa16.35■□□□□ 0.21
PTPN9-206ENST00000618819 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.35■□□□□ 0.21
PTPN9-206ENST00000618819 ATP5DP30049 168 aa16.35■□□□□ 0.21
PTPN9-206ENST00000618819 INF2Q27J81 1249 aa16.35■□□□□ 0.21
PTPN9-206ENST00000618819 PHLDB2Q86SQ0 1253 aa16.35■□□□□ 0.21
PTPN9-206ENST00000618819 TMPOP42166 694 aaKnown RBP16.34■□□□□ 0.21
PTPN9-206ENST00000618819 ALG1Q9BT22 464 aa16.34■□□□□ 0.21
PTPN9-206ENST00000618819 CDK19Q9BWU1 502 aa16.34■□□□□ 0.21
PTPN9-206ENST00000618819 E7EVH7 732 aa16.34■□□□□ 0.21
PTPN9-206ENST00000618819 TRIM31Q9BZY9 425 aa16.34■□□□□ 0.21
PTPN9-206ENST00000618819 TUBB4AP04350 444 aa16.34■□□□□ 0.21
PTPN9-206ENST00000618819 SPAG1Q07617 926 aa16.34■□□□□ 0.21
PTPN9-206ENST00000618819 KLF18A0A0U1RQI7 1052 aa16.34■□□□□ 0.21
PTPN9-206ENST00000618819 CETN3O15182 167 aa16.34■□□□□ 0.21
PTPN9-206ENST00000618819 KCNG4Q8TDN1 519 aa16.34■□□□□ 0.21
PTPN9-206ENST00000618819 FAM13AO94988 1023 aa16.34■□□□□ 0.21
PTPN9-206ENST00000618819 OAS2P29728 719 aaKnown RBP16.34■□□□□ 0.21
PTPN9-206ENST00000618819 MFSD6Q6ZSS7 791 aa16.34■□□□□ 0.21
PTPN9-206ENST00000618819 BRF1Q92994 677 aa16.34■□□□□ 0.21
PTPN9-206ENST00000618819 CABS1Q96KC9 395 aa16.34■□□□□ 0.21
PTPN9-206ENST00000618819 MGEA5O60502 916 aa16.33■□□□□ 0.21
PTPN9-206ENST00000618819 SEL1L2Q5TEA6 688 aa16.33■□□□□ 0.21
PTPN9-206ENST00000618819 ERO1AQ96HE7 468 aa16.33■□□□□ 0.21
PTPN9-206ENST00000618819 ZMAT2Q96NC0 199 aaKnown RBP16.33■□□□□ 0.21
PTPN9-206ENST00000618819 C17orf53Q8N3J3 647 aaPredicted RBP16.33■□□□□ 0.21
PTPN9-206ENST00000618819 RARSP54136 660 aaKnown RBP16.33■□□□□ 0.2
PTPN9-206ENST00000618819 PPP2R5CQ13362 524 aa16.33■□□□□ 0.2
PTPN9-206ENST00000618819 TAF7Q15545 349 aaPredicted RBP16.33■□□□□ 0.2
PTPN9-206ENST00000618819 CCDC14Q49A88 953 aa16.33■□□□□ 0.2
PTPN9-206ENST00000618819 GIGYF1O75420 1035 aaPredicted RBP16.33■□□□□ 0.2
PTPN9-206ENST00000618819 NCOA7Q8NI08 942 aa16.33■□□□□ 0.2
PTPN9-206ENST00000618819 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.33■□□□□ 0.2
PTPN9-206ENST00000618819 PPANQ9NQ55 473 aaKnown RBP16.33■□□□□ 0.2
PTPN9-206ENST00000618819 SLC5A1P13866 664 aa16.32■□□□□ 0.2
PTPN9-206ENST00000618819 ARHGAP25P42331 645 aa16.32■□□□□ 0.2
PTPN9-206ENST00000618819 RAPGEF1Q13905 1077 aa16.32■□□□□ 0.2
PTPN9-206ENST00000618819 JAKMIP2Q96AA8 810 aa16.32■□□□□ 0.2
PTPN9-206ENST00000618819 MAK16Q9BXY0 300 aaKnown RBP16.32■□□□□ 0.2
PTPN9-206ENST00000618819 PFDN1O60925 122 aa16.32■□□□□ 0.2
PTPN9-206ENST00000618819 TUBB4BP68371 445 aa16.32■□□□□ 0.2
PTPN9-206ENST00000618819 TXNDC2Q86VQ3 553 aa16.32■□□□□ 0.2
PTPN9-206ENST00000618819 MYCBPQ99417 103 aaPredicted RBP16.32■□□□□ 0.2
PTPN9-206ENST00000618819 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.32■□□□□ 0.2
PTPN9-206ENST00000618819 SPECC1L-ADORA2AF8WAN1 911 aa16.32■□□□□ 0.2
PTPN9-206ENST00000618819 NFE2L2Q16236 605 aa16.32■□□□□ 0.2
PTPN9-206ENST00000618819 CCDC26Q8TAB7 109 aa16.32■□□□□ 0.2
PTPN9-206ENST00000618819 MTUS1Q9ULD2 1270 aa16.32■□□□□ 0.2
PTPN9-206ENST00000618819 DCAF8L1A6NGE4 600 aa16.32■□□□□ 0.2
PTPN9-206ENST00000618819 C8orf74Q6P047 294 aa16.32■□□□□ 0.2
PTPN9-206ENST00000618819 BAG1Q99933 345 aaPredicted RBP16.32■□□□□ 0.2
PTPN9-206ENST00000618819 RIPOR2Q9Y4F9 1068 aa16.32■□□□□ 0.2
PTPN9-206ENST00000618819 GNAT3A8MTJ3 354 aa16.32■□□□□ 0.2
PTPN9-206ENST00000618819 MGARPQ8TDB4 240 aa16.32■□□□□ 0.2
PTPN9-206ENST00000618819 CAPN7Q9Y6W3 813 aa16.32■□□□□ 0.2
PTPN9-206ENST00000618819 PLS1Q14651 629 aa16.32■□□□□ 0.2
PTPN9-206ENST00000618819 LEO1Q8WVC0 666 aaPredicted RBP16.32■□□□□ 0.2
PTPN9-206ENST00000618819 CCT6AP40227 531 aaKnown RBP16.32■□□□□ 0.2
PTPN9-206ENST00000618819 IFIT5Q13325 482 aaKnown RBP16.31■□□□□ 0.2
PTPN9-206ENST00000618819 CARD6Q9BX69 1037 aa16.31■□□□□ 0.2
PTPN9-206ENST00000618819 TSGA10Q9BZW7 698 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms