RNA–Protein interactions for RNA: ENST00000617198.4

DDX1-207, Transcript of DEAD-box helicase 1, humanhuman

TSL 1 (best) BASIC

Gene DDX1, Length 2,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-207ENST00000617198 DCAF5Q96JK2 942 aa20.49■□□□□ 0.87
DDX1-207ENST00000617198 NEUROD6Q96NK8 337 aa20.49■□□□□ 0.87
DDX1-207ENST00000617198 FAM160A1Q05DH4 1040 aa20.48■□□□□ 0.87
DDX1-207ENST00000617198 ZMYM1Q5SVZ6 1142 aa20.48■□□□□ 0.87
DDX1-207ENST00000617198 ENGASEQ8NFI3 743 aa20.48■□□□□ 0.87
DDX1-207ENST00000617198 ZNF142P52746 1687 aaPredicted RBP20.48■□□□□ 0.87
DDX1-207ENST00000617198 BECN2A8MW95 431 aa20.48■□□□□ 0.87
DDX1-207ENST00000617198 E7EWF7 191 aa20.48■□□□□ 0.87
DDX1-207ENST00000617198 FOXO4P98177 505 aa20.48■□□□□ 0.87
DDX1-207ENST00000617198 GPR108Q9NPR9 543 aa20.48■□□□□ 0.87
DDX1-207ENST00000617198 ANO10Q9NW15 660 aa20.48■□□□□ 0.87
DDX1-207ENST00000617198 MST1RQ04912 1400 aa20.47■□□□□ 0.87
DDX1-207ENST00000617198 HSPD1P10809 573 aaKnown RBP20.47■□□□□ 0.87
DDX1-207ENST00000617198 NCBP1Q09161 790 aaKnown RBP20.47■□□□□ 0.87
DDX1-207ENST00000617198 SLFNL1Q499Z3 407 aa20.47■□□□□ 0.87
DDX1-207ENST00000617198 ATG9AQ7Z3C6 839 aa20.47■□□□□ 0.87
DDX1-207ENST00000617198 CHMP4CQ96CF2 233 aa20.47■□□□□ 0.87
DDX1-207ENST00000617198 ZNF274Q96GC6 653 aaPredicted RBP20.47■□□□□ 0.87
DDX1-207ENST00000617198 KIF1AQ12756 1690 aa20.47■□□□□ 0.87
DDX1-207ENST00000617198 ZSCAN20P17040 1043 aaPredicted RBP20.47■□□□□ 0.87
DDX1-207ENST00000617198 NCOA5Q9HCD5 579 aaKnown RBP20.47■□□□□ 0.87
DDX1-207ENST00000617198 PDIA3P30101 505 aaKnown RBP20.46■□□□□ 0.87
DDX1-207ENST00000617198 RBM6P78332 1123 aaKnown RBP20.46■□□□□ 0.87
DDX1-207ENST00000617198 DMTNQ08495 405 aa20.46■□□□□ 0.87
DDX1-207ENST00000617198 H7C1W4 665 aa20.46■□□□□ 0.87
DDX1-207ENST00000617198 ME1P48163 572 aa20.46■□□□□ 0.87
DDX1-207ENST00000617198 UTP14CQ5TAP6 766 aaKnown RBP20.46■□□□□ 0.87
DDX1-207ENST00000617198 DHX40Q8IX18 779 aaKnown RBP20.46■□□□□ 0.87
DDX1-207ENST00000617198 FSIP1Q8NA03 581 aa20.46■□□□□ 0.87
DDX1-207ENST00000617198 CCDC112Q8NEF3 446 aa20.46■□□□□ 0.87
DDX1-207ENST00000617198 NAP1L2Q9ULW6 460 aaPredicted RBP20.46■□□□□ 0.87
DDX1-207ENST00000617198 ABCC6O95255 1503 aa20.45■□□□□ 0.86
DDX1-207ENST00000617198 TIMM10P62072 90 aa20.45■□□□□ 0.86
DDX1-207ENST00000617198 ILDR1Q86SU0 546 aaPredicted RBP20.45■□□□□ 0.86
DDX1-207ENST00000617198 A0A0G2JLW4 131 aa20.44■□□□□ 0.86
DDX1-207ENST00000617198 CYP27B1O15528 508 aa20.44■□□□□ 0.86
DDX1-207ENST00000617198 IL15P40933 162 aaPredicted RBP20.44■□□□□ 0.86
DDX1-207ENST00000617198 MAST3O60307 1309 aa20.44■□□□□ 0.86
DDX1-207ENST00000617198 CARMIL3Q8ND23 1372 aa20.44■□□□□ 0.86
DDX1-207ENST00000617198 ALS2Q96Q42 1657 aa20.44■□□□□ 0.86
DDX1-207ENST00000617198 U2AF2P26368 475 aaKnown RBP eCLIP20.44■□□□□ 0.861e-7■■■■□ 21.1
DDX1-207ENST00000617198 GUCY1B3Q02153 619 aa20.44■□□□□ 0.86
DDX1-207ENST00000617198 CEP135Q66GS9 1140 aa20.44■□□□□ 0.86
DDX1-207ENST00000617198 CEP57L1Q8IYX8 460 aa20.44■□□□□ 0.86
DDX1-207ENST00000617198 LAMB4A4D0S4 1761 aa20.43■□□□□ 0.86
DDX1-207ENST00000617198 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.43■□□□□ 0.86
DDX1-207ENST00000617198 RNF113AO15541 343 aaKnown RBP20.43■□□□□ 0.86
DDX1-207ENST00000617198 ARID5BQ14865 1188 aa20.43■□□□□ 0.86
DDX1-207ENST00000617198 CABP4P57796 275 aa20.43■□□□□ 0.86
DDX1-207ENST00000617198 NAT10Q9H0A0 1025 aaKnown RBP20.43■□□□□ 0.86
DDX1-207ENST00000617198 C1orf167Q5SNV9 1468 aa20.42■□□□□ 0.86
DDX1-207ENST00000617198 PLEKHG2Q9H7P9 1386 aa20.42■□□□□ 0.86
DDX1-207ENST00000617198 SPDYE4A6NLX3 237 aa20.42■□□□□ 0.86
DDX1-207ENST00000617198 IFIT1P09914 478 aaKnown RBP20.42■□□□□ 0.86
DDX1-207ENST00000617198 CSB-PGBD3P0DP91 1061 aa20.42■□□□□ 0.86
DDX1-207ENST00000617198 SKILP12757 684 aa20.42■□□□□ 0.86
DDX1-207ENST00000617198 CHST3Q7LGC8 479 aa20.42■□□□□ 0.86
DDX1-207ENST00000617198 FBXL16Q8N461 479 aa20.42■□□□□ 0.86
DDX1-207ENST00000617198 MRPS27Q92552 414 aaKnown RBP20.42■□□□□ 0.86
DDX1-207ENST00000617198 FEZ1Q99689 392 aa20.42■□□□□ 0.86
DDX1-207ENST00000617198 RTEL1Q9NZ71 1219 aa20.42■□□□□ 0.86
DDX1-207ENST00000617198 TMEM94Q12767 1356 aa20.42■□□□□ 0.86
DDX1-207ENST00000617198 A0A087WWV3 80 aa20.42■□□□□ 0.86
DDX1-207ENST00000617198 PPFIA3O75145 1194 aa20.42■□□□□ 0.86
DDX1-207ENST00000617198 ADALQ6DHV7 355 aa20.42■□□□□ 0.86
DDX1-207ENST00000617198 FMR1NBQ8N0W7 255 aaPredicted RBP20.42■□□□□ 0.86
DDX1-207ENST00000617198 CWC25Q9NXE8 425 aaPredicted RBP20.42■□□□□ 0.86
DDX1-207ENST00000617198 PCDHA7Q9UN72 937 aa20.42■□□□□ 0.86
DDX1-207ENST00000617198 SPEF2Q9C093 1822 aa20.41■□□□□ 0.86
DDX1-207ENST00000617198 GLI3P10071 1580 aa20.41■□□□□ 0.86
DDX1-207ENST00000617198 CCDC69A6NI79 296 aa20.41■□□□□ 0.86
DDX1-207ENST00000617198 EVCP57679 992 aa20.41■□□□□ 0.86
DDX1-207ENST00000617198 FILIP1Q7Z7B0 1213 aa20.41■□□□□ 0.86
DDX1-207ENST00000617198 AOPEPQ8N6M6 819 aa20.41■□□□□ 0.86
DDX1-207ENST00000617198 FDPSP14324 419 aaKnown RBP20.41■□□□□ 0.86
DDX1-207ENST00000617198 A0A1W2PQ27 194 aa20.4■□□□□ 0.86
DDX1-207ENST00000617198 A0A1W2PQ64 194 aa20.4■□□□□ 0.86
DDX1-207ENST00000617198 A0A1W2PQD8 194 aa20.4■□□□□ 0.86
DDX1-207ENST00000617198 USP27XA6NNY8 438 aa20.4■□□□□ 0.86
DDX1-207ENST00000617198 M0R2C6 588 aa20.4■□□□□ 0.86
DDX1-207ENST00000617198 EYA2O00167 538 aa20.4■□□□□ 0.86
DDX1-207ENST00000617198 CCZ1BP86790 482 aa20.4■□□□□ 0.86
DDX1-207ENST00000617198 CCZ1P86791 482 aaPredicted RBP20.4■□□□□ 0.86
DDX1-207ENST00000617198 PTPN14Q15678 1187 aa20.4■□□□□ 0.86
DDX1-207ENST00000617198 NYAP1Q6ZVC0 841 aa20.4■□□□□ 0.86
DDX1-207ENST00000617198 ZNF592Q92610 1267 aa20.4■□□□□ 0.86
DDX1-207ENST00000617198 SDF4Q9BRK5 362 aa20.4■□□□□ 0.86
DDX1-207ENST00000617198 GTPBP4Q9BZE4 634 aaKnown RBP20.4■□□□□ 0.86
DDX1-207ENST00000617198 A0A1B0GUL7 405 aa20.39■□□□□ 0.86
DDX1-207ENST00000617198 NBPF26B4DH59 902 aa20.39■□□□□ 0.86
DDX1-207ENST00000617198 LRRC24Q50LG9 513 aa20.39■□□□□ 0.86
DDX1-207ENST00000617198 NBPF14Q5TI25 921 aa20.39■□□□□ 0.86
DDX1-207ENST00000617198 NBPF10Q6P3W6 841 aaKnown RBP20.39■□□□□ 0.86
DDX1-207ENST00000617198 NBPF15Q8N660 670 aa20.39■□□□□ 0.86
DDX1-207ENST00000617198 CGNQ9P2M7 1197 aaKnown RBP20.39■□□□□ 0.86
DDX1-207ENST00000617198 COL18A1P39060 1754 aa20.39■□□□□ 0.86
DDX1-207ENST00000617198 PKD1L3Q7Z443 1732 aa20.39■□□□□ 0.86
DDX1-207ENST00000617198 TTLL5Q6EMB2 1281 aa20.39■□□□□ 0.85
DDX1-207ENST00000617198 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.39■□□□□ 0.85
DDX1-207ENST00000617198 ERCC4Q92889 916 aaPredicted RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms