RNA–Protein interactions for RNA: ENST00000615317.4

MMP28-205, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-205ENST00000615317 NUCB1Q02818 461 aa11.21□□□□□ -0.61
MMP28-205ENST00000615317 SOGA3Q5TF21 947 aa11.21□□□□□ -0.61
MMP28-205ENST00000615317 CLASRPQ8N2M8 674 aaKnown RBP11.21□□□□□ -0.61
MMP28-205ENST00000615317 MPNDQ8N594 471 aa11.21□□□□□ -0.61
MMP28-205ENST00000615317 TBC1D16Q8TBP0 767 aa11.21□□□□□ -0.61
MMP28-205ENST00000615317 OTUD7AQ8TE49 926 aaPredicted RBP11.21□□□□□ -0.61
MMP28-205ENST00000615317 CCDC8Q9H0W5 538 aaPredicted RBP11.21□□□□□ -0.61
MMP28-205ENST00000615317 DBNLQ9UJU6 430 aaKnown RBP11.21□□□□□ -0.61
MMP28-205ENST00000615317 C6orf229H3BNL8 230 aa11.2□□□□□ -0.62
MMP28-205ENST00000615317 NFKBIEO00221 500 aa11.2□□□□□ -0.62
MMP28-205ENST00000615317 FGFR2P21802 821 aa11.2□□□□□ -0.62
MMP28-205ENST00000615317 ATP2B4P23634 1241 aa11.2□□□□□ -0.62
MMP28-205ENST00000615317 TSHZ3Q63HK5 1081 aa11.2□□□□□ -0.62
MMP28-205ENST00000615317 CHD1LQ86WJ1 897 aa11.2□□□□□ -0.62
MMP28-205ENST00000615317 EAF2Q96CJ1 260 aaPredicted RBP11.2□□□□□ -0.62
MMP28-205ENST00000615317 NEUROD6Q96NK8 337 aa11.2□□□□□ -0.62
MMP28-205ENST00000615317 DBNDD2Q9BQY9 259 aa11.2□□□□□ -0.62
MMP28-205ENST00000615317 TAOK3Q9H2K8 898 aa11.2□□□□□ -0.62
MMP28-205ENST00000615317 PODXL2Q9NZ53 605 aa11.2□□□□□ -0.62
MMP28-205ENST00000615317 POLLQ9UGP5 575 aa11.2□□□□□ -0.62
MMP28-205ENST00000615317 IRS2Q9Y4H2 1338 aa11.19□□□□□ -0.62
MMP28-205ENST00000615317 IFIT2P09913 472 aaKnown RBP11.19□□□□□ -0.62
MMP28-205ENST00000615317 IFIT1P09914 478 aaKnown RBP11.19□□□□□ -0.62
MMP28-205ENST00000615317 PDE4AP27815 886 aa11.19□□□□□ -0.62
MMP28-205ENST00000615317 GYG1P46976 350 aa11.19□□□□□ -0.62
MMP28-205ENST00000615317 CC2D2BQ6DHV5 1058 aa11.19□□□□□ -0.62
MMP28-205ENST00000615317 LPIN2Q92539 896 aa11.19□□□□□ -0.62
MMP28-205ENST00000615317 GPR108Q9NPR9 543 aa11.19□□□□□ -0.62
MMP28-205ENST00000615317 ZNF277Q9NRM2 450 aaPredicted RBP11.19□□□□□ -0.62
MMP28-205ENST00000615317 AKAP2Q9Y2D5 859 aa11.19□□□□□ -0.62
MMP28-205ENST00000615317 LEMD3Q9Y2U8 911 aa11.19□□□□□ -0.62
MMP28-205ENST00000615317 RIMBP2O15034 1052 aa11.18□□□□□ -0.62
MMP28-205ENST00000615317 PPIP5K2O43314 1243 aa11.18□□□□□ -0.62
MMP28-205ENST00000615317 MX1P20591 662 aa11.18□□□□□ -0.62
MMP28-205ENST00000615317 TIMM10P62072 90 aa11.18□□□□□ -0.62
MMP28-205ENST00000615317 FKBP4Q02790 459 aaKnown RBP eCLIP11.18□□□□□ -0.62
MMP28-205ENST00000615317 UBE4AQ14139 1066 aa11.18□□□□□ -0.62
MMP28-205ENST00000615317 AOC3Q16853 763 aa11.18□□□□□ -0.62
MMP28-205ENST00000615317 TXNRD3Q86VQ6 643 aa11.18□□□□□ -0.62
MMP28-205ENST00000615317 C16orf71Q8IYS4 520 aaPredicted RBP11.18□□□□□ -0.62
MMP28-205ENST00000615317 RTKN2Q8IZC4 609 aa11.18□□□□□ -0.62
MMP28-205ENST00000615317 XAGE2Q96GT9 111 aa11.18□□□□□ -0.62
MMP28-205ENST00000615317 SALL3Q9BXA9 1300 aa11.17□□□□□ -0.62
MMP28-205ENST00000615317 PHKA1P46020 1223 aa11.17□□□□□ -0.62
MMP28-205ENST00000615317 RGS3P49796 1198 aa11.17□□□□□ -0.62
MMP28-205ENST00000615317 GPR162Q16538 588 aa11.17□□□□□ -0.62
MMP28-205ENST00000615317 GORABQ5T7V8 394 aa11.17□□□□□ -0.62
MMP28-205ENST00000615317 SUPT20HQ8NEM7 779 aa11.17□□□□□ -0.62
MMP28-205ENST00000615317 PSMD1Q99460 953 aa11.17□□□□□ -0.62
MMP28-205ENST00000615317 EYA3Q99504 573 aa11.17□□□□□ -0.62
MMP28-205ENST00000615317 RTFDC1Q9BY42 306 aaPredicted RBP11.17□□□□□ -0.62
MMP28-205ENST00000615317 GOLGB1Q14789 3259 aaKnown RBP11.17□□□□□ -0.62
MMP28-205ENST00000615317 LTBP3Q9NS15 1303 aa11.16□□□□□ -0.62
MMP28-205ENST00000615317 IARSP41252 1262 aaKnown RBP11.16□□□□□ -0.62
MMP28-205ENST00000615317 WASHC4Q2M389 1173 aa11.16□□□□□ -0.62
MMP28-205ENST00000615317 TTC39AQ5SRH9 613 aa11.16□□□□□ -0.62
MMP28-205ENST00000615317 ZNF804AQ7Z570 1209 aa11.16□□□□□ -0.62
MMP28-205ENST00000615317 VPS37DQ86XT2 251 aa11.16□□□□□ -0.62
MMP28-205ENST00000615317 GPATCH3Q96I76 525 aa11.16□□□□□ -0.62
MMP28-205ENST00000615317 DBNDD1Q9H9R9 158 aa11.16□□□□□ -0.62
MMP28-205ENST00000615317 IQSEC3Q9UPP2 1182 aaPredicted RBP11.16□□□□□ -0.62
MMP28-205ENST00000615317 ECE2O60344 883 aa11.15□□□□□ -0.62
MMP28-205ENST00000615317 BCAMP50895 628 aa11.15□□□□□ -0.62
MMP28-205ENST00000615317 PRELPP51888 382 aa11.15□□□□□ -0.62
MMP28-205ENST00000615317 KIAA2012Q0VF49 1180 aa11.15□□□□□ -0.62
MMP28-205ENST00000615317 DOK7Q18PE1 504 aa11.15□□□□□ -0.62
MMP28-205ENST00000615317 GRIPAP1Q4V328 841 aa11.15□□□□□ -0.62
MMP28-205ENST00000615317 CAVIN4Q5BKX8 364 aa11.15□□□□□ -0.62
MMP28-205ENST00000615317 CCDC102BQ68D86 513 aa11.15□□□□□ -0.62
MMP28-205ENST00000615317 PI16Q6UXB8 463 aa11.15□□□□□ -0.62
MMP28-205ENST00000615317 ARHGAP27Q6ZUM4 889 aa11.15□□□□□ -0.62
MMP28-205ENST00000615317 LARGE2Q8N3Y3 721 aa11.15□□□□□ -0.62
MMP28-205ENST00000615317 JAG2Q9Y219 1238 aa11.15□□□□□ -0.62
MMP28-205ENST00000615317 SRCAPQ6ZRS2 3230 aa11.14□□□□□ -0.63
MMP28-205ENST00000615317 ARID4AP29374 1257 aaPredicted RBP11.14□□□□□ -0.63
MMP28-205ENST00000615317 RASGRF1Q13972 1273 aa11.14□□□□□ -0.63
MMP28-205ENST00000615317 SCARF1Q14162 830 aa11.14□□□□□ -0.63
MMP28-205ENST00000615317 CCDC158Q5M9N0 1113 aa11.14□□□□□ -0.63
MMP28-205ENST00000615317 C15orf52Q6ZUT6 534 aaKnown RBP11.14□□□□□ -0.63
MMP28-205ENST00000615317 PLEKHM2Q8IWE5 1019 aa11.14□□□□□ -0.63
MMP28-205ENST00000615317 FBXW7Q969H0 707 aa11.14□□□□□ -0.63
MMP28-205ENST00000615317 FAM84BQ96KN1 310 aaPredicted RBP11.14□□□□□ -0.63
MMP28-205ENST00000615317 ZC3H12CQ9C0D7 883 aaKnown RBP11.14□□□□□ -0.63
MMP28-205ENST00000615317 ECHDC1Q9NTX5 307 aa11.14□□□□□ -0.63
MMP28-205ENST00000615317 NDUFB9Q9Y6M9 179 aa11.14□□□□□ -0.63
MMP28-205ENST00000615317 ECM29Q5VYK3 1845 aa11.14□□□□□ -0.63
MMP28-205ENST00000615317 MYH2Q9UKX2 1941 aa11.13□□□□□ -0.63
MMP28-205ENST00000615317 AOX1Q06278 1338 aa11.13□□□□□ -0.63
MMP28-205ENST00000615317 TTC41PQ6P2S7 1318 aa11.13□□□□□ -0.63
MMP28-205ENST00000615317 G3V3G9 751 aa11.13□□□□□ -0.63
MMP28-205ENST00000615317 HIBADHP31937 336 aaKnown RBP11.13□□□□□ -0.63
MMP28-205ENST00000615317 MCAMP43121 646 aa11.13□□□□□ -0.63
MMP28-205ENST00000615317 PDE1AP54750 535 aa11.13□□□□□ -0.63
MMP28-205ENST00000615317 CHAF1AQ13111 956 aaPredicted RBP11.13□□□□□ -0.63
MMP28-205ENST00000615317 DCAF8Q5TAQ9 597 aa11.13□□□□□ -0.63
MMP28-205ENST00000615317 NIM1KQ8IY84 436 aa11.13□□□□□ -0.63
MMP28-205ENST00000615317 PI4K2BQ8TCG2 481 aa11.13□□□□□ -0.63
MMP28-205ENST00000615317 DNAJC2Q99543 621 aaKnown RBP11.13□□□□□ -0.63
MMP28-205ENST00000615317 CDK5RAP2Q96SN8 1893 aa11.12□□□□□ -0.63
MMP28-205ENST00000615317 FRAT2O75474 233 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms