RNA–Protein interactions for RNA: ENST00000611138.1

FAM228B-206, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 2

Gene FAM228B, Length 362 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-206ENST00000611138 KCNJ4P48050 445 aa10.68□□□□□ -0.7
FAM228B-206ENST00000611138 FKBP4Q02790 459 aaKnown RBP eCLIP10.68□□□□□ -0.7
FAM228B-206ENST00000611138 RTKN2Q8IZC4 609 aa10.68□□□□□ -0.7
FAM228B-206ENST00000611138 TAOK3Q9H2K8 898 aa10.68□□□□□ -0.7
FAM228B-206ENST00000611138 GGA1Q9UJY5 639 aa10.68□□□□□ -0.7
FAM228B-206ENST00000611138 COL4A5P29400 1685 aa10.68□□□□□ -0.7
FAM228B-206ENST00000611138 UTRNP46939 3433 aa10.68□□□□□ -0.7
FAM228B-206ENST00000611138 ZNF646O15015 1829 aaPredicted RBP10.68□□□□□ -0.7
FAM228B-206ENST00000611138 ZNF804BA4D1E1 1349 aa10.67□□□□□ -0.7
FAM228B-206ENST00000611138 SNAP23O00161 211 aa10.67□□□□□ -0.7
FAM228B-206ENST00000611138 GRIN3BO60391 1043 aa10.67□□□□□ -0.7
FAM228B-206ENST00000611138 TFCP2Q12800 502 aa10.67□□□□□ -0.7
FAM228B-206ENST00000611138 TBC1D16Q8TBP0 767 aa10.67□□□□□ -0.7
FAM228B-206ENST00000611138 BCL11AQ9H165 835 aa10.67□□□□□ -0.7
FAM228B-206ENST00000611138 ZNF277Q9NRM2 450 aaPredicted RBP10.67□□□□□ -0.7
FAM228B-206ENST00000611138 PODXL2Q9NZ53 605 aa10.67□□□□□ -0.7
FAM228B-206ENST00000611138 POLLQ9UGP5 575 aa10.67□□□□□ -0.7
FAM228B-206ENST00000611138 FBXO3Q9UK99 471 aa10.67□□□□□ -0.7
FAM228B-206ENST00000611138 FARP1Q9Y4F1 1045 aaPredicted RBP10.67□□□□□ -0.7
FAM228B-206ENST00000611138 ZNF609O15014 1411 aa10.67□□□□□ -0.7
FAM228B-206ENST00000611138 RIMBP2O15034 1052 aa10.66□□□□□ -0.7
FAM228B-206ENST00000611138 SASH1O94885 1247 aa10.66□□□□□ -0.7
FAM228B-206ENST00000611138 PDE8BO95263 885 aa10.66□□□□□ -0.7
FAM228B-206ENST00000611138 ATP2B4P23634 1241 aa10.66□□□□□ -0.7
FAM228B-206ENST00000611138 GRIPAP1Q4V328 841 aa10.66□□□□□ -0.7
FAM228B-206ENST00000611138 VGLL2Q8N8G2 317 aa10.66□□□□□ -0.7
FAM228B-206ENST00000611138 SUPT20HQ8NEM7 779 aa10.66□□□□□ -0.7
FAM228B-206ENST00000611138 PSMD1Q99460 953 aa10.66□□□□□ -0.7
FAM228B-206ENST00000611138 CEP126Q9P2H0 1117 aa10.66□□□□□ -0.7
FAM228B-206ENST00000611138 NOP58Q9Y2X3 529 aaKnown RBP10.66□□□□□ -0.7
FAM228B-206ENST00000611138 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.66□□□□□ -0.7
FAM228B-206ENST00000611138 SCN9AQ15858 1988 aa10.66□□□□□ -0.7
FAM228B-206ENST00000611138 LTBP3Q9NS15 1303 aa10.65□□□□□ -0.7
FAM228B-206ENST00000611138 PPIP5K2O43314 1243 aa10.65□□□□□ -0.7
FAM228B-206ENST00000611138 KLRK1P26718 216 aa10.65□□□□□ -0.7
FAM228B-206ENST00000611138 IARSP41252 1262 aaKnown RBP10.65□□□□□ -0.7
FAM228B-206ENST00000611138 PRELPP51888 382 aa10.65□□□□□ -0.7
FAM228B-206ENST00000611138 HDAC1Q13547 482 aaPredicted RBP10.65□□□□□ -0.7
FAM228B-206ENST00000611138 PUM3Q15397 648 aaKnown RBP10.65□□□□□ -0.7
FAM228B-206ENST00000611138 ATP2B3Q16720 1220 aa10.65□□□□□ -0.7
FAM228B-206ENST00000611138 AOC3Q16853 763 aa10.65□□□□□ -0.7
FAM228B-206ENST00000611138 EYA3Q99504 573 aa10.65□□□□□ -0.7
FAM228B-206ENST00000611138 RTFDC1Q9BY42 306 aaPredicted RBP10.65□□□□□ -0.7
FAM228B-206ENST00000611138 RWDD1Q9H446 243 aaPredicted RBP10.65□□□□□ -0.7
FAM228B-206ENST00000611138 LEMD3Q9Y2U8 911 aa10.65□□□□□ -0.7
FAM228B-206ENST00000611138 MED23Q9ULK4 1368 aa10.65□□□□□ -0.71
FAM228B-206ENST00000611138 IGHDP01880 384 aa10.64□□□□□ -0.71
FAM228B-206ENST00000611138 LMNB1P20700 586 aa10.64□□□□□ -0.71
FAM228B-206ENST00000611138 WASHC4Q2M389 1173 aa10.64□□□□□ -0.71
FAM228B-206ENST00000611138 HSP90AB4PQ58FF6 505 aa10.64□□□□□ -0.71
FAM228B-206ENST00000611138 ERC1Q8IUD2 1116 aa10.64□□□□□ -0.71
FAM228B-206ENST00000611138 LARGE2Q8N3Y3 721 aa10.64□□□□□ -0.71
FAM228B-206ENST00000611138 ZNF579Q8NAF0 562 aaKnown RBP10.64□□□□□ -0.71
FAM228B-206ENST00000611138 ZC3H12CQ9C0D7 883 aaKnown RBP10.64□□□□□ -0.71
FAM228B-206ENST00000611138 DCTPP1Q9H773 170 aa10.64□□□□□ -0.71
FAM228B-206ENST00000611138 IL1RAPL2Q9NP60 686 aa10.64□□□□□ -0.71
FAM228B-206ENST00000611138 A0A1B0GUL7 405 aa10.63□□□□□ -0.71
FAM228B-206ENST00000611138 SMARCA5O60264 1052 aaPredicted RBP10.63□□□□□ -0.71
FAM228B-206ENST00000611138 RAB11FIP3O75154 756 aa10.63□□□□□ -0.71
FAM228B-206ENST00000611138 SLC5A1P13866 664 aa10.63□□□□□ -0.71
FAM228B-206ENST00000611138 UBE4AQ14139 1066 aa10.63□□□□□ -0.71
FAM228B-206ENST00000611138 DOK7Q18PE1 504 aa10.63□□□□□ -0.71
FAM228B-206ENST00000611138 TXNRD3Q86VQ6 643 aa10.63□□□□□ -0.71
FAM228B-206ENST00000611138 RHPN1Q8TCX5 695 aa10.63□□□□□ -0.71
FAM228B-206ENST00000611138 KIF1BPQ96EK5 621 aa10.63□□□□□ -0.71
FAM228B-206ENST00000611138 NEUROD6Q96NK8 337 aa10.63□□□□□ -0.71
FAM228B-206ENST00000611138 DBNDD1Q9H9R9 158 aa10.63□□□□□ -0.71
FAM228B-206ENST00000611138 RNF181Q9P0P0 153 aa10.63□□□□□ -0.71
FAM228B-206ENST00000611138 IRS2Q9Y4H2 1338 aa10.62□□□□□ -0.71
FAM228B-206ENST00000611138 MYO5AQ9Y4I1 1855 aaKnown RBP10.62□□□□□ -0.71
FAM228B-206ENST00000611138 G3V3G9 751 aa10.62□□□□□ -0.71
FAM228B-206ENST00000611138 GALR2O43603 387 aaPredicted RBP10.62□□□□□ -0.71
FAM228B-206ENST00000611138 IFIT1P09914 478 aaKnown RBP10.62□□□□□ -0.71
FAM228B-206ENST00000611138 FGFR2P21802 821 aa10.62□□□□□ -0.71
FAM228B-206ENST00000611138 ADORA1P30542 326 aa10.62□□□□□ -0.71
FAM228B-206ENST00000611138 GYG1P46976 350 aa10.62□□□□□ -0.71
FAM228B-206ENST00000611138 TIMM10P62072 90 aa10.62□□□□□ -0.71
FAM228B-206ENST00000611138 KIAA2012Q0VF49 1180 aa10.62□□□□□ -0.71
FAM228B-206ENST00000611138 TNNI3KQ59H18 835 aa10.62□□□□□ -0.71
FAM228B-206ENST00000611138 DCAF8Q5TAQ9 597 aa10.62□□□□□ -0.71
FAM228B-206ENST00000611138 C9orf131Q5VYM1 1079 aa10.62□□□□□ -0.71
FAM228B-206ENST00000611138 B4GALNT3Q6L9W6 998 aa10.62□□□□□ -0.71
FAM228B-206ENST00000611138 NIM1KQ8IY84 436 aa10.62□□□□□ -0.71
FAM228B-206ENST00000611138 LPIN2Q92539 896 aa10.62□□□□□ -0.71
FAM228B-206ENST00000611138 LRRCC1Q9C099 1032 aa10.62□□□□□ -0.71
FAM228B-206ENST00000611138 AKAP2Q9Y2D5 859 aa10.62□□□□□ -0.71
FAM228B-206ENST00000611138 FPGT-TNNI3KV9GXZ4 949 aa10.62□□□□□ -0.71
FAM228B-206ENST00000611138 AKAP11Q9UKA4 1901 aa10.62□□□□□ -0.71
FAM228B-206ENST00000611138 AK9Q5TCS8 1911 aa10.61□□□□□ -0.71
FAM228B-206ENST00000611138 ECE2O60344 883 aa10.61□□□□□ -0.71
FAM228B-206ENST00000611138 ZNF804AQ7Z570 1209 aa10.61□□□□□ -0.71
FAM228B-206ENST00000611138 AACSQ86V21 672 aa10.61□□□□□ -0.71
FAM228B-206ENST00000611138 JDP2Q8WYK2 163 aa10.61□□□□□ -0.71
FAM228B-206ENST00000611138 GCC1Q96CN9 775 aa10.61□□□□□ -0.71
FAM228B-206ENST00000611138 CCDC136Q96JN2 1154 aa10.61□□□□□ -0.71
FAM228B-206ENST00000611138 CCDC8Q9H0W5 538 aaPredicted RBP10.61□□□□□ -0.71
FAM228B-206ENST00000611138 GPR108Q9NPR9 543 aa10.61□□□□□ -0.71
FAM228B-206ENST00000611138 TLR7Q9NYK1 1049 aaKnown RBP10.61□□□□□ -0.71
FAM228B-206ENST00000611138 ADAMTSL1Q8N6G6 1762 aa10.6□□□□□ -0.71
FAM228B-206ENST00000611138 CAVIN4Q5BKX8 364 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms