RNA–Protein interactions for RNA: ENST00000606299.1

CSNK1A1-209, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 3 BASIC

Gene CSNK1A1, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-209ENST00000606299 CLN3Q13286 438 aa12.68□□□□□ -0.38
CSNK1A1-209ENST00000606299 ARHGEF25Q86VW2 580 aa12.68□□□□□ -0.38
CSNK1A1-209ENST00000606299 THUMPD2Q9BTF0 503 aaKnown RBP12.68□□□□□ -0.38
CSNK1A1-209ENST00000606299 PPP4R2Q9NY27 417 aa12.68□□□□□ -0.38
CSNK1A1-209ENST00000606299 LAS1LQ9Y4W2 734 aaKnown RBP12.68□□□□□ -0.38
CSNK1A1-209ENST00000606299 ABCC6O95255 1503 aa12.67□□□□□ -0.38
CSNK1A1-209ENST00000606299 MEN1O00255 615 aa12.67□□□□□ -0.38
CSNK1A1-209ENST00000606299 CALD1Q05682 793 aaKnown RBP12.67□□□□□ -0.38
CSNK1A1-209ENST00000606299 VAC14Q08AM6 782 aa12.67□□□□□ -0.38
CSNK1A1-209ENST00000606299 USHBP1Q8N6Y0 703 aa12.67□□□□□ -0.38
CSNK1A1-209ENST00000606299 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.67□□□□□ -0.38
CSNK1A1-209ENST00000606299 CCDC85AQ96PX6 553 aaPredicted RBP12.67□□□□□ -0.38
CSNK1A1-209ENST00000606299 SCN11AQ9UI33 1791 aa12.66□□□□□ -0.38
CSNK1A1-209ENST00000606299 LORP23490 312 aaPredicted RBP12.66□□□□□ -0.38
CSNK1A1-209ENST00000606299 SOX11P35716 441 aa12.66□□□□□ -0.38
CSNK1A1-209ENST00000606299 ZC3H6P61129 1189 aaKnown RBP12.66□□□□□ -0.38
CSNK1A1-209ENST00000606299 NLRP3Q96P20 1036 aa12.66□□□□□ -0.38
CSNK1A1-209ENST00000606299 PARP4Q9UKK3 1724 aaKnown RBP12.65□□□□□ -0.38
CSNK1A1-209ENST00000606299 FAM83GA6ND36 823 aa12.65□□□□□ -0.38
CSNK1A1-209ENST00000606299 BCAR3O75815 825 aa12.65□□□□□ -0.38
CSNK1A1-209ENST00000606299 GNRH1P01148 92 aa12.65□□□□□ -0.38
CSNK1A1-209ENST00000606299 EXOSC9Q06265 439 aaKnown RBP12.65□□□□□ -0.38
CSNK1A1-209ENST00000606299 SLFNL1Q499Z3 407 aa12.65□□□□□ -0.38
CSNK1A1-209ENST00000606299 PHTF2Q8N3S3 785 aa12.65□□□□□ -0.38
CSNK1A1-209ENST00000606299 ARHGEF10LQ9HCE6 1279 aa12.65□□□□□ -0.38
CSNK1A1-209ENST00000606299 SIPA1L3O60292 1781 aaPredicted RBP12.65□□□□□ -0.38
CSNK1A1-209ENST00000606299 KDM3BQ7LBC6 1761 aa12.64□□□□□ -0.39
CSNK1A1-209ENST00000606299 AHDC1Q5TGY3 1603 aaPredicted RBP12.64□□□□□ -0.39
CSNK1A1-209ENST00000606299 CANXP27824 592 aaKnown RBP12.64□□□□□ -0.39
CSNK1A1-209ENST00000606299 DCTN1Q14203 1278 aa12.64□□□□□ -0.39
CSNK1A1-209ENST00000606299 MTHFSDQ2M296 383 aaKnown RBP12.64□□□□□ -0.39
CSNK1A1-209ENST00000606299 RNF135Q8IUD6 432 aa12.64□□□□□ -0.39
CSNK1A1-209ENST00000606299 EXOC6Q8TAG9 804 aa12.64□□□□□ -0.39
CSNK1A1-209ENST00000606299 ANKRD24Q8TF21 1146 aa12.64□□□□□ -0.39
CSNK1A1-209ENST00000606299 LRRC59Q96AG4 307 aaKnown RBP12.64□□□□□ -0.39
CSNK1A1-209ENST00000606299 DOLKQ9UPQ8 538 aa12.64□□□□□ -0.39
CSNK1A1-209ENST00000606299 PKD1L3Q7Z443 1732 aa12.63□□□□□ -0.39
CSNK1A1-209ENST00000606299 GNAI1P63096 354 aa12.63□□□□□ -0.39
CSNK1A1-209ENST00000606299 NBPF6Q5VWK0 638 aa12.63□□□□□ -0.39
CSNK1A1-209ENST00000606299 B4GALNT3Q6L9W6 998 aa12.63□□□□□ -0.39
CSNK1A1-209ENST00000606299 GAS2L2Q8NHY3 880 aa12.63□□□□□ -0.39
CSNK1A1-209ENST00000606299 NBPF4Q96M43 638 aa12.63□□□□□ -0.39
CSNK1A1-209ENST00000606299 CRBNQ96SW2 442 aa12.63□□□□□ -0.39
CSNK1A1-209ENST00000606299 IFT57Q9NWB7 429 aa12.63□□□□□ -0.39
CSNK1A1-209ENST00000606299 COL22A1Q8NFW1 1626 aaPredicted RBP12.62□□□□□ -0.39
CSNK1A1-209ENST00000606299 MCM10Q7L590 875 aa12.62□□□□□ -0.39
CSNK1A1-209ENST00000606299 PRICKLE2Q7Z3G6 844 aa12.62□□□□□ -0.39
CSNK1A1-209ENST00000606299 COG6Q9Y2V7 657 aa12.62□□□□□ -0.39
CSNK1A1-209ENST00000606299 NCAPD2Q15021 1401 aa12.62□□□□□ -0.39
CSNK1A1-209ENST00000606299 KIAA0232Q92628 1395 aa12.61□□□□□ -0.39
CSNK1A1-209ENST00000606299 MAP3K5Q99683 1374 aa12.61□□□□□ -0.39
CSNK1A1-209ENST00000606299 WNK3Q9BYP7 1800 aa12.61□□□□□ -0.39
CSNK1A1-209ENST00000606299 RARSP54136 660 aaKnown RBP12.61□□□□□ -0.39
CSNK1A1-209ENST00000606299 CHRNA2Q15822 529 aa12.61□□□□□ -0.39
CSNK1A1-209ENST00000606299 SLC27A3Q5K4L6 730 aa12.61□□□□□ -0.39
CSNK1A1-209ENST00000606299 C20orf194Q5TEA3 1177 aa12.61□□□□□ -0.39
CSNK1A1-209ENST00000606299 RTF1Q92541 710 aaKnown RBP12.61□□□□□ -0.39
CSNK1A1-209ENST00000606299 CDCA7Q9BWT1 371 aaPredicted RBP12.61□□□□□ -0.39
CSNK1A1-209ENST00000606299 BCL2L13Q9BXK5 485 aa12.61□□□□□ -0.39
CSNK1A1-209ENST00000606299 CT47B1P0C2W7 299 aaPredicted RBP12.6□□□□□ -0.39
CSNK1A1-209ENST00000606299 FLIIQ13045 1269 aa12.6□□□□□ -0.39
CSNK1A1-209ENST00000606299 USP4Q13107 963 aa12.6□□□□□ -0.39
CSNK1A1-209ENST00000606299 SV2AQ7L0J3 742 aa12.6□□□□□ -0.39
CSNK1A1-209ENST00000606299 CCDC136Q96JN2 1154 aa12.6□□□□□ -0.39
CSNK1A1-209ENST00000606299 GRIP2Q9C0E4 1043 aa12.6□□□□□ -0.39
CSNK1A1-209ENST00000606299 MBIPQ9NS73 344 aa12.6□□□□□ -0.39
CSNK1A1-209ENST00000606299 COL14A1Q05707 1796 aaKnown RBP12.6□□□□□ -0.39
CSNK1A1-209ENST00000606299 PLCH1Q4KWH8 1693 aa12.6□□□□□ -0.39
CSNK1A1-209ENST00000606299 KAT6BQ8WYB5 2073 aa12.6□□□□□ -0.39
CSNK1A1-209ENST00000606299 SHANK3Q9BYB0 1731 aa12.59□□□□□ -0.39
CSNK1A1-209ENST00000606299 CPDO75976 1380 aa12.59□□□□□ -0.39
CSNK1A1-209ENST00000606299 CDC14CA4D256 554 aa12.59□□□□□ -0.39
CSNK1A1-209ENST00000606299 ZNF853P0CG23 659 aa12.59□□□□□ -0.39
CSNK1A1-209ENST00000606299 SEMA3FQ13275 785 aa12.59□□□□□ -0.39
CSNK1A1-209ENST00000606299 WDR44Q5JSH3 913 aa12.59□□□□□ -0.39
CSNK1A1-209ENST00000606299 GPR161Q8N6U8 529 aaKnown RBP12.59□□□□□ -0.39
CSNK1A1-209ENST00000606299 FRAT1Q92837 279 aaPredicted RBP12.59□□□□□ -0.39
CSNK1A1-209ENST00000606299 ESYT1Q9BSJ8 1104 aa12.59□□□□□ -0.39
CSNK1A1-209ENST00000606299 CRB1P82279 1406 aa12.59□□□□□ -0.39
CSNK1A1-209ENST00000606299 COL16A1Q07092 1604 aaPredicted RBP12.59□□□□□ -0.39
CSNK1A1-209ENST00000606299 GNAT3A8MTJ3 354 aa12.58□□□□□ -0.4
CSNK1A1-209ENST00000606299 SPATA31C2B4DYI2 1134 aa12.58□□□□□ -0.4
CSNK1A1-209ENST00000606299 CSB-PGBD3P0DP91 1061 aa12.58□□□□□ -0.4
CSNK1A1-209ENST00000606299 RHOQP17081 205 aa12.58□□□□□ -0.4
CSNK1A1-209ENST00000606299 MAP7D1Q3KQU3 841 aa12.58□□□□□ -0.4
CSNK1A1-209ENST00000606299 GMCL1Q96IK5 515 aa12.58□□□□□ -0.4
CSNK1A1-209ENST00000606299 SMC4Q9NTJ3 1288 aa12.58□□□□□ -0.4
CSNK1A1-209ENST00000606299 ADAMTS7Q9UKP4 1686 aa12.57□□□□□ -0.4
CSNK1A1-209ENST00000606299 KRT76Q01546 638 aa12.57□□□□□ -0.4
CSNK1A1-209ENST00000606299 VWA5B2Q8N398 1253 aa12.57□□□□□ -0.4
CSNK1A1-209ENST00000606299 CNKSR1Q969H4 720 aa12.57□□□□□ -0.4
CSNK1A1-209ENST00000606299 COL25A1Q9BXS0 654 aaPredicted RBP12.57□□□□□ -0.4
CSNK1A1-209ENST00000606299 PRDM11Q9NQV5 511 aa12.57□□□□□ -0.4
CSNK1A1-209ENST00000606299 RAB6BQ9NRW1 208 aa12.57□□□□□ -0.4
CSNK1A1-209ENST00000606299 NLRP2Q9NX02 1062 aa12.57□□□□□ -0.4
CSNK1A1-209ENST00000606299 DYRK1BQ9Y463 629 aa12.57□□□□□ -0.4
CSNK1A1-209ENST00000606299 HTATSF1O43719 755 aaKnown RBP12.56□□□□□ -0.4
CSNK1A1-209ENST00000606299 IL2RAP01589 272 aa12.56□□□□□ -0.4
CSNK1A1-209ENST00000606299 PLEKHO1Q53GL0 409 aaPredicted RBP12.56□□□□□ -0.4
CSNK1A1-209ENST00000606299 NBPF10Q6P3W6 841 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms