RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 EXOSC10Q01780 885 aaKnown RBP17.79■□□□□ 0.44
LYSMD4-211ENST00000604213 TFCP2Q12800 502 aa17.79■□□□□ 0.44
LYSMD4-211ENST00000604213 SYT10Q6XYQ8 523 aa17.79■□□□□ 0.44
LYSMD4-211ENST00000604213 BPIFA3Q9BQP9 254 aa17.79■□□□□ 0.44
LYSMD4-211ENST00000604213 AGXT2Q9BYV1 514 aa17.79■□□□□ 0.44
LYSMD4-211ENST00000604213 XPO4Q9C0E2 1151 aaKnown RBP17.79■□□□□ 0.44
LYSMD4-211ENST00000604213 NFAT5O94916 1531 aa17.79■□□□□ 0.44
LYSMD4-211ENST00000604213 ABCC6O95255 1503 aa17.79■□□□□ 0.44
LYSMD4-211ENST00000604213 OVOS2A0A0G2JMS6 1433 aa17.79■□□□□ 0.44
LYSMD4-211ENST00000604213 CCT2P78371 535 aaKnown RBP17.79■□□□□ 0.44
LYSMD4-211ENST00000604213 GUCY1B3Q02153 619 aa17.79■□□□□ 0.44
LYSMD4-211ENST00000604213 BMS1Q14692 1282 aaKnown RBP17.79■□□□□ 0.44
LYSMD4-211ENST00000604213 AMOTQ4VCS5 1084 aa17.79■□□□□ 0.44
LYSMD4-211ENST00000604213 TMC6Q7Z403 805 aa17.79■□□□□ 0.44
LYSMD4-211ENST00000604213 DNAJC2Q99543 621 aaKnown RBP17.79■□□□□ 0.44
LYSMD4-211ENST00000604213 HAUS7Q99871 368 aa17.79■□□□□ 0.44
LYSMD4-211ENST00000604213 SDF4Q9BRK5 362 aa17.79■□□□□ 0.44
LYSMD4-211ENST00000604213 NCOA5Q9HCD5 579 aaKnown RBP17.79■□□□□ 0.44
LYSMD4-211ENST00000604213 A0A1W2PQ27 194 aa17.78■□□□□ 0.44
LYSMD4-211ENST00000604213 A0A1W2PQ64 194 aa17.78■□□□□ 0.44
LYSMD4-211ENST00000604213 A0A1W2PQD8 194 aa17.78■□□□□ 0.44
LYSMD4-211ENST00000604213 RFX5P48382 616 aaPredicted RBP17.78■□□□□ 0.44
LYSMD4-211ENST00000604213 GCKRQ14397 625 aa17.78■□□□□ 0.44
LYSMD4-211ENST00000604213 DPCR1Q3MIW9 517 aa17.78■□□□□ 0.44
LYSMD4-211ENST00000604213 C1orf141Q5JVX7 400 aa17.78■□□□□ 0.44
LYSMD4-211ENST00000604213 RIC3Q7Z5B4 369 aa17.78■□□□□ 0.44
LYSMD4-211ENST00000604213 RTEL1Q9NZ71 1219 aa17.78■□□□□ 0.44
LYSMD4-211ENST00000604213 IFNKQ9P0W0 207 aa17.78■□□□□ 0.44
LYSMD4-211ENST00000604213 KIAA1468Q9P260 1216 aa17.78■□□□□ 0.44
LYSMD4-211ENST00000604213 FHOD1Q9Y613 1164 aa17.78■□□□□ 0.44
LYSMD4-211ENST00000604213 NDUFA8P51970 172 aa17.77■□□□□ 0.44
LYSMD4-211ENST00000604213 ADALQ6DHV7 355 aa17.77■□□□□ 0.44
LYSMD4-211ENST00000604213 SYTL4Q96C24 671 aaPredicted RBP17.77■□□□□ 0.44
LYSMD4-211ENST00000604213 NEDD4P46934 1319 aa17.77■□□□□ 0.44
LYSMD4-211ENST00000604213 A0A1B0GVL5 298 aa17.77■□□□□ 0.44
LYSMD4-211ENST00000604213 SMC2O95347 1197 aa17.77■□□□□ 0.44
LYSMD4-211ENST00000604213 CREBRFQ8IUR6 639 aa17.77■□□□□ 0.44
LYSMD4-211ENST00000604213 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.77■□□□□ 0.44
LYSMD4-211ENST00000604213 RGPD2P0DJD1 1756 aa17.77■□□□□ 0.44
LYSMD4-211ENST00000604213 SFPQP23246 707 aaKnown RBP eCLIP17.76■□□□□ 0.43
LYSMD4-211ENST00000604213 CLCN6P51797 869 aa17.76■□□□□ 0.43
LYSMD4-211ENST00000604213 PTPN12Q05209 780 aaKnown RBP17.76■□□□□ 0.43
LYSMD4-211ENST00000604213 DDX46Q7L014 1031 aaKnown RBP17.76■□□□□ 0.43
LYSMD4-211ENST00000604213 DBNDD2Q9BQY9 259 aa17.76■□□□□ 0.43
LYSMD4-211ENST00000604213 TMEM51Q9NW97 253 aa17.76■□□□□ 0.43
LYSMD4-211ENST00000604213 SH3TC1Q8TE82 1336 aa17.76■□□□□ 0.43
LYSMD4-211ENST00000604213 LAMA4Q16363 1823 aa17.76■□□□□ 0.43
LYSMD4-211ENST00000604213 PPFIA3O75145 1194 aa17.76■□□□□ 0.43
LYSMD4-211ENST00000604213 TUBB4AP04350 444 aa17.76■□□□□ 0.43
LYSMD4-211ENST00000604213 PLPPR3Q6T4P5 718 aa17.76■□□□□ 0.43
LYSMD4-211ENST00000604213 SETD1BQ9UPS6 1966 aaKnown RBP17.75■□□□□ 0.43
LYSMD4-211ENST00000604213 PDIA3P30101 505 aaKnown RBP17.75■□□□□ 0.43
LYSMD4-211ENST00000604213 NEXNQ0ZGT2 675 aa17.75■□□□□ 0.43
LYSMD4-211ENST00000604213 KBTBD3Q8NAB2 608 aa17.75■□□□□ 0.43
LYSMD4-211ENST00000604213 LINC00301Q8NCQ3 95 aa17.75■□□□□ 0.43
LYSMD4-211ENST00000604213 NOL10Q9BSC4 688 aaKnown RBP17.75■□□□□ 0.43
LYSMD4-211ENST00000604213 CARMIL3Q8ND23 1372 aa17.75■□□□□ 0.43
LYSMD4-211ENST00000604213 ARHGAP23Q9P227 1491 aa17.75■□□□□ 0.43
LYSMD4-211ENST00000604213 FDPSP14324 419 aaKnown RBP17.74■□□□□ 0.43
LYSMD4-211ENST00000604213 DHX8Q14562 1220 aaKnown RBP17.74■□□□□ 0.43
LYSMD4-211ENST00000604213 NCAPHQ15003 741 aa17.74■□□□□ 0.43
LYSMD4-211ENST00000604213 ZNF274Q96GC6 653 aaPredicted RBP17.74■□□□□ 0.43
LYSMD4-211ENST00000604213 ERICH4A6NGS2 130 aa17.74■□□□□ 0.43
LYSMD4-211ENST00000604213 PNMA6AP0CW24 399 aaPredicted RBP17.74■□□□□ 0.43
LYSMD4-211ENST00000604213 ARHGAP29Q52LW3 1261 aa17.74■□□□□ 0.43
LYSMD4-211ENST00000604213 TIGD1Q96MW7 591 aa17.74■□□□□ 0.43
LYSMD4-211ENST00000604213 MYD88Q99836 296 aa17.74■□□□□ 0.43
LYSMD4-211ENST00000604213 METTL22Q9BUU2 404 aaPredicted RBP17.74■□□□□ 0.43
LYSMD4-211ENST00000604213 DSCC1Q9BVC3 393 aa17.74■□□□□ 0.43
LYSMD4-211ENST00000604213 CLIC4Q9Y696 253 aa17.74■□□□□ 0.43
LYSMD4-211ENST00000604213 A0A0G2JLW4 131 aa17.73■□□□□ 0.43
LYSMD4-211ENST00000604213 NLRP12P59046 1061 aa17.73■□□□□ 0.43
LYSMD4-211ENST00000604213 E7EWF7 191 aa17.73■□□□□ 0.43
LYSMD4-211ENST00000604213 ZBTB22O15209 634 aa17.73■□□□□ 0.43
LYSMD4-211ENST00000604213 ZRANB2O95218 330 aaKnown RBP eCLIP17.73■□□□□ 0.43
LYSMD4-211ENST00000604213 CYP2C19P33261 490 aa17.73■□□□□ 0.43
LYSMD4-211ENST00000604213 PLA2G4AP47712 749 aa17.73■□□□□ 0.43
LYSMD4-211ENST00000604213 ETF1P62495 437 aaKnown RBP17.73■□□□□ 0.43
LYSMD4-211ENST00000604213 ZRSR1Q15695 479 aaKnown RBP17.73■□□□□ 0.43
LYSMD4-211ENST00000604213 XAGE3Q8WTP9 111 aa17.73■□□□□ 0.43
LYSMD4-211ENST00000604213 NAP1L2Q9ULW6 460 aaPredicted RBP17.73■□□□□ 0.43
LYSMD4-211ENST00000604213 KCNA6P17658 529 aa17.72■□□□□ 0.43
LYSMD4-211ENST00000604213 GTF2E1P29083 439 aaPredicted RBP17.72■□□□□ 0.43
LYSMD4-211ENST00000604213 HELLSQ9NRZ9 838 aa17.72■□□□□ 0.43
LYSMD4-211ENST00000604213 PHF8Q9UPP1 1060 aa17.72■□□□□ 0.43
LYSMD4-211ENST00000604213 PHLPP2Q6ZVD8 1323 aa17.72■□□□□ 0.43
LYSMD4-211ENST00000604213 BIN1O00499 593 aa17.72■□□□□ 0.43
LYSMD4-211ENST00000604213 NRDCO43847 1150 aa17.72■□□□□ 0.43
LYSMD4-211ENST00000604213 SLC3A2P08195 630 aaKnown RBP17.72■□□□□ 0.43
LYSMD4-211ENST00000604213 MYL6BP14649 208 aa17.72■□□□□ 0.43
LYSMD4-211ENST00000604213 STK38Q15208 465 aa17.72■□□□□ 0.43
LYSMD4-211ENST00000604213 RABL6Q3YEC7 729 aaPredicted RBP17.72■□□□□ 0.43
LYSMD4-211ENST00000604213 KCNG4Q8TDN1 519 aa17.72■□□□□ 0.43
LYSMD4-211ENST00000604213 CALCOCO1Q9P1Z2 691 aa17.72■□□□□ 0.43
LYSMD4-211ENST00000604213 ORC3Q9UBD5 711 aaPredicted RBP17.72■□□□□ 0.43
LYSMD4-211ENST00000604213 PALLDQ8WX93 1383 aa17.71■□□□□ 0.43
LYSMD4-211ENST00000604213 SIPA1L3O60292 1781 aaPredicted RBP17.71■□□□□ 0.43
LYSMD4-211ENST00000604213 YEATS4O95619 227 aa17.71■□□□□ 0.43
LYSMD4-211ENST00000604213 TPM4P67936 248 aa17.71■□□□□ 0.43
LYSMD4-211ENST00000604213 SF3A1Q15459 793 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms