RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 FBXO3Q9UK99 471 aa29.76■■■□□ 2.35
SSX2IP-209ENST00000603677 ZBTB12Q9Y330 459 aaPredicted RBP29.76■■■□□ 2.35
SSX2IP-209ENST00000603677 KLRG1Q96E93 195 aa29.75■■■□□ 2.35
SSX2IP-209ENST00000603677 KCNQ5Q9NR82 932 aa29.75■■■□□ 2.35
SSX2IP-209ENST00000603677 A0A1B0GUL6 1792 aa29.75■■■□□ 2.35
SSX2IP-209ENST00000603677 GNAI3P08754 354 aa29.74■■■□□ 2.35
SSX2IP-209ENST00000603677 ZNF594Q96JF6 807 aaPredicted RBP29.74■■■□□ 2.35
SSX2IP-209ENST00000603677 RIPOR2Q9Y4F9 1068 aa29.74■■■□□ 2.35
SSX2IP-209ENST00000603677 MAP1SQ66K74 1059 aaPredicted RBP29.73■■■□□ 2.35
SSX2IP-209ENST00000603677 ZNF804AQ7Z570 1209 aa29.73■■■□□ 2.35
SSX2IP-209ENST00000603677 GMLQ99445 158 aa29.73■■■□□ 2.35
SSX2IP-209ENST00000603677 IRS2Q9Y4H2 1338 aa29.72■■■□□ 2.35
SSX2IP-209ENST00000603677 TMEM88BA6NKF7 163 aa29.72■■■□□ 2.35
SSX2IP-209ENST00000603677 ZNF280AP59817 542 aaPredicted RBP29.72■■■□□ 2.35
SSX2IP-209ENST00000603677 WTIPA6NIX2 430 aaPredicted RBP29.71■■■□□ 2.35
SSX2IP-209ENST00000603677 TAF5LO75529 589 aa29.71■■■□□ 2.35
SSX2IP-209ENST00000603677 ZKSCAN2Q63HK3 967 aa29.71■■■□□ 2.35
SSX2IP-209ENST00000603677 TXNRD3Q86VQ6 643 aa29.71■■■□□ 2.35
SSX2IP-209ENST00000603677 CD209Q9NNX6 404 aa29.71■■■□□ 2.35
SSX2IP-209ENST00000603677 BCAR3O75815 825 aa29.7■■■□□ 2.35
SSX2IP-209ENST00000603677 TRIM27P14373 513 aa29.7■■■□□ 2.35
SSX2IP-209ENST00000603677 CDC37L1Q7L3B6 337 aa29.7■■■□□ 2.35
SSX2IP-209ENST00000603677 USP17L8P0C7I0 530 aa29.69■■■□□ 2.34
SSX2IP-209ENST00000603677 IL1R1P14778 569 aa29.69■■■□□ 2.34
SSX2IP-209ENST00000603677 HIRAP54198 1017 aaPredicted RBP29.69■■■□□ 2.34
SSX2IP-209ENST00000603677 DACT2Q5SW24 774 aa29.69■■■□□ 2.34
SSX2IP-209ENST00000603677 TTLL5Q6EMB2 1281 aa29.69■■■□□ 2.34
SSX2IP-209ENST00000603677 HELBQ8NG08 1087 aaPredicted RBP29.69■■■□□ 2.34
SSX2IP-209ENST00000603677 FKBP1AP62942 108 aaKnown RBP29.68■■■□□ 2.34
SSX2IP-209ENST00000603677 OGFOD1Q8N543 542 aa29.68■■■□□ 2.34
SSX2IP-209ENST00000603677 JMYQ8N9B5 988 aa29.68■■■□□ 2.34
SSX2IP-209ENST00000603677 TRPM4Q8TD43 1214 aa29.67■■■□□ 2.34
SSX2IP-209ENST00000603677 FRAT1Q92837 279 aaPredicted RBP29.67■■■□□ 2.34
SSX2IP-209ENST00000603677 PDE8BO95263 885 aa29.66■■■□□ 2.34
SSX2IP-209ENST00000603677 SAMD7Q7Z3H4 446 aa29.66■■■□□ 2.34
SSX2IP-209ENST00000603677 TRPM7Q96QT4 1865 aa29.65■■■□□ 2.34
SSX2IP-209ENST00000603677 RFX5P48382 616 aaPredicted RBP29.65■■■□□ 2.34
SSX2IP-209ENST00000603677 KIF4BQ2VIQ3 1234 aa29.65■■■□□ 2.34
SSX2IP-209ENST00000603677 PUS3Q9BZE2 481 aaKnown RBP29.65■■■□□ 2.34
SSX2IP-209ENST00000603677 EYA2O00167 538 aa29.64■■■□□ 2.34
SSX2IP-209ENST00000603677 PLIN1O60240 522 aa29.64■■■□□ 2.34
SSX2IP-209ENST00000603677 CIAO1O76071 339 aa29.64■■■□□ 2.34
SSX2IP-209ENST00000603677 SASH1O94885 1247 aa29.64■■■□□ 2.34
SSX2IP-209ENST00000603677 KLRK1P26718 216 aa29.64■■■□□ 2.34
SSX2IP-209ENST00000603677 PTPN12Q05209 780 aaKnown RBP29.64■■■□□ 2.34
SSX2IP-209ENST00000603677 METTL24Q5JXM2 366 aa29.64■■■□□ 2.34
SSX2IP-209ENST00000603677 MTX1Q13505 466 aa29.63■■■□□ 2.33
SSX2IP-209ENST00000603677 TBC1D10BQ4KMP7 808 aaPredicted RBP29.63■■■□□ 2.33
SSX2IP-209ENST00000603677 DCPSQ96C86 337 aaKnown RBP29.63■■■□□ 2.33
SSX2IP-209ENST00000603677 MEIS3Q99687 375 aa29.63■■■□□ 2.33
SSX2IP-209ENST00000603677 MYOZ2Q9NPC6 264 aa29.63■■■□□ 2.33
SSX2IP-209ENST00000603677 HDAC9Q9UKV0 1011 aa29.63■■■□□ 2.33
SSX2IP-209ENST00000603677 LRRFIP2Q9Y608 721 aaKnown RBP29.63■■■□□ 2.33
SSX2IP-209ENST00000603677 ZNF646O15015 1829 aaPredicted RBP29.63■■■□□ 2.33
SSX2IP-209ENST00000603677 HIBADHP31937 336 aaKnown RBP29.62■■■□□ 2.33
SSX2IP-209ENST00000603677 HTRA3P83110 453 aa29.62■■■□□ 2.33
SSX2IP-209ENST00000603677 LRRC24Q50LG9 513 aa29.62■■■□□ 2.33
SSX2IP-209ENST00000603677 VGLL2Q8N8G2 317 aa29.62■■■□□ 2.33
SSX2IP-209ENST00000603677 PITPNM2Q9BZ72 1349 aa29.62■■■□□ 2.33
SSX2IP-209ENST00000603677 SHTN1A0MZ66 631 aa29.61■■■□□ 2.33
SSX2IP-209ENST00000603677 GTF2IP78347 998 aa29.61■■■□□ 2.33
SSX2IP-209ENST00000603677 CAVIN4Q5BKX8 364 aa29.61■■■□□ 2.33
SSX2IP-209ENST00000603677 SNAP23O00161 211 aa29.6■■■□□ 2.33
SSX2IP-209ENST00000603677 MS4A1P11836 297 aa29.6■■■□□ 2.33
SSX2IP-209ENST00000603677 TDRD7Q8NHU6 1098 aaKnown RBP29.6■■■□□ 2.33
SSX2IP-209ENST00000603677 COPRSQ9NQ92 184 aa29.6■■■□□ 2.33
SSX2IP-209ENST00000603677 FAM205AQ6ZU69 1335 aa29.6■■■□□ 2.33
SSX2IP-209ENST00000603677 CNTNAP1P78357 1384 aa29.6■■■□□ 2.33
SSX2IP-209ENST00000603677 RASSF10A6NK89 507 aa29.59■■■□□ 2.33
SSX2IP-209ENST00000603677 GNAI2P04899 355 aa29.59■■■□□ 2.33
SSX2IP-209ENST00000603677 PUM3Q15397 648 aaKnown RBP29.59■■■□□ 2.33
SSX2IP-209ENST00000603677 FAM84BQ96KN1 310 aaPredicted RBP29.59■■■□□ 2.33
SSX2IP-209ENST00000603677 IFIT1P09914 478 aaKnown RBP29.58■■■□□ 2.33
SSX2IP-209ENST00000603677 FTSJ3Q8IY81 847 aaKnown RBP29.58■■■□□ 2.33
SSX2IP-209ENST00000603677 DZIP1LQ8IYY4 767 aaKnown RBP29.58■■■□□ 2.33
SSX2IP-209ENST00000603677 FBXW7Q969H0 707 aa29.58■■■□□ 2.33
SSX2IP-209ENST00000603677 IL15P40933 162 aaPredicted RBP29.57■■■□□ 2.32
SSX2IP-209ENST00000603677 RBM26Q5T8P6 1007 aaKnown RBP29.57■■■□□ 2.32
SSX2IP-209ENST00000603677 KRT26Q7Z3Y9 468 aa29.57■■■□□ 2.32
SSX2IP-209ENST00000603677 FBXO33Q7Z6M2 555 aa29.57■■■□□ 2.32
SSX2IP-209ENST00000603677 SULF1Q8IWU6 871 aa29.57■■■□□ 2.32
SSX2IP-209ENST00000603677 HHIPL1Q96JK4 782 aa29.57■■■□□ 2.32
SSX2IP-209ENST00000603677 GLIS2Q9BZE0 524 aaPredicted RBP29.57■■■□□ 2.32
SSX2IP-209ENST00000603677 EGFRP00533 1210 aa29.56■■■□□ 2.32
SSX2IP-209ENST00000603677 FGFR2P21802 821 aa29.56■■■□□ 2.32
SSX2IP-209ENST00000603677 VPS37DQ86XT2 251 aa29.56■■■□□ 2.32
SSX2IP-209ENST00000603677 KLHDC4Q8TBB5 520 aa29.56■■■□□ 2.32
SSX2IP-209ENST00000603677 LPIN2Q92539 896 aa29.56■■■□□ 2.32
SSX2IP-209ENST00000603677 CLUAP1Q96AJ1 413 aa29.56■■■□□ 2.32
SSX2IP-209ENST00000603677 ZBTB22O15209 634 aa29.55■■■□□ 2.32
SSX2IP-209ENST00000603677 SCARF1Q14162 830 aa29.55■■■□□ 2.32
SSX2IP-209ENST00000603677 DEFB115Q30KQ5 88 aa29.55■■■□□ 2.32
SSX2IP-209ENST00000603677 CST9Q5W186 159 aa29.55■■■□□ 2.32
SSX2IP-209ENST00000603677 ATG9AQ7Z3C6 839 aa29.55■■■□□ 2.32
SSX2IP-209ENST00000603677 MTMR14Q8NCE2 650 aa29.55■■■□□ 2.32
SSX2IP-209ENST00000603677 CEP126Q9P2H0 1117 aa29.55■■■□□ 2.32
SSX2IP-209ENST00000603677 POLR2AP24928 1970 aaKnown RBP29.55■■■□□ 2.32
SSX2IP-209ENST00000603677 TMEM57Q8N5G2 664 aa29.54■■■□□ 2.32
SSX2IP-209ENST00000603677 TRAF5O00463 557 aa29.53■■■□□ 2.32
SSX2IP-209ENST00000603677 SLC5A1P13866 664 aa29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms