RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 DCTPP1Q9H773 170 aa20.58■□□□□ 0.89
USHBP1-210ENST00000600286 NMRK2Q9NPI5 230 aa20.58■□□□□ 0.89
USHBP1-210ENST00000600286 RNF181Q9P0P0 153 aa20.58■□□□□ 0.89
USHBP1-210ENST00000600286 APBB1O00213 710 aa20.57■□□□□ 0.88
USHBP1-210ENST00000600286 HSPA6P17066 643 aa20.57■□□□□ 0.88
USHBP1-210ENST00000600286 AOC3Q16853 763 aa20.57■□□□□ 0.88
USHBP1-210ENST00000600286 ZNF804AQ7Z570 1209 aa20.57■□□□□ 0.88
USHBP1-210ENST00000600286 GPR108Q9NPR9 543 aa20.57■□□□□ 0.88
USHBP1-210ENST00000600286 GORABQ5T7V8 394 aa20.56■□□□□ 0.88
USHBP1-210ENST00000600286 SLC51AQ86UW1 340 aa20.56■□□□□ 0.88
USHBP1-210ENST00000600286 CLASRPQ8N2M8 674 aaKnown RBP20.56■□□□□ 0.88
USHBP1-210ENST00000600286 VGLL2Q8N8G2 317 aa20.56■□□□□ 0.88
USHBP1-210ENST00000600286 RHPN1Q8TCX5 695 aa20.56■□□□□ 0.88
USHBP1-210ENST00000600286 NEUROD6Q96NK8 337 aa20.56■□□□□ 0.88
USHBP1-210ENST00000600286 SASH1O94885 1247 aa20.55■□□□□ 0.88
USHBP1-210ENST00000600286 C15orf52Q6ZUT6 534 aaKnown RBP20.55■□□□□ 0.88
USHBP1-210ENST00000600286 LRRCC1Q9C099 1032 aa20.55■□□□□ 0.88
USHBP1-210ENST00000600286 COA1Q9GZY4 146 aa20.55■□□□□ 0.88
USHBP1-210ENST00000600286 MED23Q9ULK4 1368 aa20.55■□□□□ 0.88
USHBP1-210ENST00000600286 ZC3H4Q9UPT8 1303 aaKnown RBP20.54■□□□□ 0.88
USHBP1-210ENST00000600286 TOMM70O94826 608 aa20.54■□□□□ 0.88
USHBP1-210ENST00000600286 EIF6P56537 245 aaKnown RBP20.54■□□□□ 0.88
USHBP1-210ENST00000600286 GNL3LQ9NVN8 582 aaKnown RBP20.54■□□□□ 0.88
USHBP1-210ENST00000600286 COL4A1P02462 1669 aa20.54■□□□□ 0.88
USHBP1-210ENST00000600286 SNED1Q8TER0 1413 aa20.53■□□□□ 0.88
USHBP1-210ENST00000600286 SNAP23O00161 211 aa20.53■□□□□ 0.88
USHBP1-210ENST00000600286 FRAT2O75474 233 aaPredicted RBP20.53■□□□□ 0.88
USHBP1-210ENST00000600286 HIBADHP31937 336 aaKnown RBP20.53■□□□□ 0.88
USHBP1-210ENST00000600286 PODNQ7Z5L7 613 aa20.53■□□□□ 0.88
USHBP1-210ENST00000600286 GPR101Q96P66 508 aaPredicted RBP20.53■□□□□ 0.88
USHBP1-210ENST00000600286 ZNRF3Q9ULT6 936 aa20.53■□□□□ 0.88
USHBP1-210ENST00000600286 LRRC37AA6NMS7 1700 aa20.53■□□□□ 0.88
USHBP1-210ENST00000600286 A0A1B0GUL7 405 aa20.52■□□□□ 0.88
USHBP1-210ENST00000600286 FGFR2P21802 821 aa20.52■□□□□ 0.88
USHBP1-210ENST00000600286 TIMM10P62072 90 aa20.52■□□□□ 0.88
USHBP1-210ENST00000600286 DOK7Q18PE1 504 aa20.52■□□□□ 0.88
USHBP1-210ENST00000600286 TNNI3KQ59H18 835 aa20.52■□□□□ 0.88
USHBP1-210ENST00000600286 DPY19L2Q6NUT2 758 aa20.52■□□□□ 0.88
USHBP1-210ENST00000600286 BCL11AQ9H165 835 aa20.52■□□□□ 0.88
USHBP1-210ENST00000600286 FPGT-TNNI3KV9GXZ4 949 aa20.52■□□□□ 0.88
USHBP1-210ENST00000600286 WDR90Q96KV7 1748 aa20.52■□□□□ 0.88
USHBP1-210ENST00000600286 SPEF2Q9C093 1822 aa20.51■□□□□ 0.87
USHBP1-210ENST00000600286 IFIT2P09913 472 aaKnown RBP20.51■□□□□ 0.87
USHBP1-210ENST00000600286 WTIPA6NIX2 430 aaPredicted RBP20.5■□□□□ 0.87
USHBP1-210ENST00000600286 ECE2O60344 883 aa20.5■□□□□ 0.87
USHBP1-210ENST00000600286 TNIP1Q15025 636 aa20.5■□□□□ 0.87
USHBP1-210ENST00000600286 CCDC158Q5M9N0 1113 aa20.5■□□□□ 0.87
USHBP1-210ENST00000600286 ANKRD45Q5TZF3 282 aa20.5■□□□□ 0.87
USHBP1-210ENST00000600286 AACSQ86V21 672 aa20.5■□□□□ 0.87
USHBP1-210ENST00000600286 FAM84BQ96KN1 310 aaPredicted RBP20.5■□□□□ 0.87
USHBP1-210ENST00000600286 DBNDD1Q9H9R9 158 aa20.5■□□□□ 0.87
USHBP1-210ENST00000600286 IL1RAPL2Q9NP60 686 aa20.5■□□□□ 0.87
USHBP1-210ENST00000600286 GYG1P46976 350 aa20.49■□□□□ 0.87
USHBP1-210ENST00000600286 XAGE2Q96GT9 111 aa20.49■□□□□ 0.87
USHBP1-210ENST00000600286 CCDC136Q96JN2 1154 aa20.49■□□□□ 0.87
USHBP1-210ENST00000600286 IGHDP01880 384 aa20.48■□□□□ 0.87
USHBP1-210ENST00000600286 FBXO33Q7Z6M2 555 aa20.48■□□□□ 0.87
USHBP1-210ENST00000600286 TXNRD3Q86VQ6 643 aa20.48■□□□□ 0.87
USHBP1-210ENST00000600286 RBM46Q8TBY0 533 aaKnown RBP20.48■□□□□ 0.87
USHBP1-210ENST00000600286 CD209Q9NNX6 404 aa20.48■□□□□ 0.87
USHBP1-210ENST00000600286 KDM2BQ8NHM5 1336 aa20.48■□□□□ 0.87
USHBP1-210ENST00000600286 FZD9O00144 591 aa20.47■□□□□ 0.87
USHBP1-210ENST00000600286 KLRK1P26718 216 aa20.47■□□□□ 0.87
USHBP1-210ENST00000600286 BCAMP50895 628 aa20.47■□□□□ 0.87
USHBP1-210ENST00000600286 FBXW7Q969H0 707 aa20.47■□□□□ 0.87
USHBP1-210ENST00000600286 GPATCH3Q96I76 525 aa20.47■□□□□ 0.87
USHBP1-210ENST00000600286 CCDC8Q9H0W5 538 aaPredicted RBP20.47■□□□□ 0.87
USHBP1-210ENST00000600286 GLTPD2A6NH11 291 aa20.46■□□□□ 0.87
USHBP1-210ENST00000600286 UQCRFS1P1P0C7P4 283 aa20.46■□□□□ 0.87
USHBP1-210ENST00000600286 IL1R1P14778 569 aa20.46■□□□□ 0.87
USHBP1-210ENST00000600286 TTC39AQ5SRH9 613 aa20.46■□□□□ 0.87
USHBP1-210ENST00000600286 CIAPIN1Q6FI81 312 aa20.46■□□□□ 0.87
USHBP1-210ENST00000600286 SMC5Q8IY18 1101 aa20.46■□□□□ 0.87
USHBP1-210ENST00000600286 EAF2Q96CJ1 260 aaPredicted RBP20.46■□□□□ 0.87
USHBP1-210ENST00000600286 PPP4R2Q9NY27 417 aa20.46■□□□□ 0.87
USHBP1-210ENST00000600286 DUOX1Q9NRD9 1551 aa20.46■□□□□ 0.87
USHBP1-210ENST00000600286 USP17L3A6NCW0 530 aa20.45■□□□□ 0.86
USHBP1-210ENST00000600286 USP17L4A6NCW7 530 aa20.45■□□□□ 0.86
USHBP1-210ENST00000600286 POTECB2RU33 542 aa20.45■□□□□ 0.86
USHBP1-210ENST00000600286 SEMA3EO15041 775 aa20.45■□□□□ 0.86
USHBP1-210ENST00000600286 CCDC102BQ68D86 513 aa20.45■□□□□ 0.86
USHBP1-210ENST00000600286 B4GALNT3Q6L9W6 998 aa20.45■□□□□ 0.86
USHBP1-210ENST00000600286 USP17L1Q7RTZ2 530 aa20.45■□□□□ 0.86
USHBP1-210ENST00000600286 RRAGCQ9HB90 399 aa20.45■□□□□ 0.86
USHBP1-210ENST00000600286 SMARCA5O60264 1052 aaPredicted RBP20.44■□□□□ 0.86
USHBP1-210ENST00000600286 RAD17O75943 681 aa20.44■□□□□ 0.86
USHBP1-210ENST00000600286 ADORA1P30542 326 aa20.44■□□□□ 0.86
USHBP1-210ENST00000600286 TTLL5Q6EMB2 1281 aa20.44■□□□□ 0.86
USHBP1-210ENST00000600286 DNAJC5GQ8N7S2 189 aa20.44■□□□□ 0.86
USHBP1-210ENST00000600286 TDRD7Q8NHU6 1098 aaKnown RBP20.44■□□□□ 0.86
USHBP1-210ENST00000600286 DBNDD2Q9BQY9 259 aa20.44■□□□□ 0.86
USHBP1-210ENST00000600286 DENND2AQ9ULE3 1009 aa20.44■□□□□ 0.86
USHBP1-210ENST00000600286 GJA3Q9Y6H8 435 aa20.44■□□□□ 0.86
USHBP1-210ENST00000600286 IRS2Q9Y4H2 1338 aa20.44■□□□□ 0.86
USHBP1-210ENST00000600286 ZNF609O15014 1411 aa20.44■□□□□ 0.86
USHBP1-210ENST00000600286 PCNTO95613 3336 aa20.43■□□□□ 0.86
USHBP1-210ENST00000600286 STRIP1Q5VSL9 837 aa20.43■□□□□ 0.86
USHBP1-210ENST00000600286 CENPQQ7L2Z9 268 aaPredicted RBP20.43■□□□□ 0.86
USHBP1-210ENST00000600286 LTBP1Q14766 1721 aa20.42■□□□□ 0.86
USHBP1-210ENST00000600286 PHKA1P46020 1223 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms