RNA–Protein interactions for RNA: ENST00000599479.1

TMEM38A-203, Transcript of transmembrane protein 38A, humanhuman

TSL 3

Gene TMEM38A, Length 410 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-203ENST00000599479 SCN4AP35499 1836 aa15.22■□□□□ 0.03
TMEM38A-203ENST00000599479 RPS12P25398 132 aaKnown RBP15.22■□□□□ 0.03
TMEM38A-203ENST00000599479 FTSJ3Q8IY81 847 aaKnown RBP15.22■□□□□ 0.03
TMEM38A-203ENST00000599479 POTEIP0CG38 1075 aa15.21■□□□□ 0.03
TMEM38A-203ENST00000599479 POTEJP0CG39 1038 aa15.21■□□□□ 0.03
TMEM38A-203ENST00000599479 IL1R1P14778 569 aa15.21■□□□□ 0.03
TMEM38A-203ENST00000599479 FGFR2P21802 821 aa15.21■□□□□ 0.03
TMEM38A-203ENST00000599479 USP50Q70EL3 339 aaPredicted RBP15.21■□□□□ 0.03
TMEM38A-203ENST00000599479 LDHDQ86WU2 507 aa15.21■□□□□ 0.03
TMEM38A-203ENST00000599479 SMC1BQ8NDV3 1235 aa15.21■□□□□ 0.03
TMEM38A-203ENST00000599479 AGBL3Q8NEM8 1001 aa15.21■□□□□ 0.03
TMEM38A-203ENST00000599479 PANK1Q8TE04 598 aa15.21■□□□□ 0.03
TMEM38A-203ENST00000599479 CD209Q9NNX6 404 aa15.21■□□□□ 0.03
TMEM38A-203ENST00000599479 PGAP2Q9UHJ9 254 aa15.21■□□□□ 0.03
TMEM38A-203ENST00000599479 ZBTB12Q9Y330 459 aaPredicted RBP15.21■□□□□ 0.03
TMEM38A-203ENST00000599479 USP17L3A6NCW0 530 aa15.2■□□□□ 0.02
TMEM38A-203ENST00000599479 USP17L4A6NCW7 530 aa15.2■□□□□ 0.02
TMEM38A-203ENST00000599479 KCNJ4P48050 445 aa15.2■□□□□ 0.02
TMEM38A-203ENST00000599479 PDE3AQ14432 1141 aa15.2■□□□□ 0.02
TMEM38A-203ENST00000599479 DACT2Q5SW24 774 aa15.2■□□□□ 0.02
TMEM38A-203ENST00000599479 STRIP1Q5VSL9 837 aa15.2■□□□□ 0.02
TMEM38A-203ENST00000599479 CHADLQ6NUI6 762 aa15.2■□□□□ 0.02
TMEM38A-203ENST00000599479 RSBN1LQ6PCB5 846 aaPredicted RBP15.2■□□□□ 0.02
TMEM38A-203ENST00000599479 USP17L1Q7RTZ2 530 aa15.2■□□□□ 0.02
TMEM38A-203ENST00000599479 FAM84BQ96KN1 310 aaPredicted RBP15.2■□□□□ 0.02
TMEM38A-203ENST00000599479 ADARB2Q9NS39 739 aaKnown RBP15.2■□□□□ 0.02
TMEM38A-203ENST00000599479 CNOT7Q9UIV1 285 aaKnown RBP15.2■□□□□ 0.02
TMEM38A-203ENST00000599479 G3V3G9 751 aa15.19■□□□□ 0.02
TMEM38A-203ENST00000599479 SRGAP3O43295 1099 aa15.19■□□□□ 0.02
TMEM38A-203ENST00000599479 PLIN1O60240 522 aa15.19■□□□□ 0.02
TMEM38A-203ENST00000599479 LMOD1P29536 600 aaPredicted RBP15.19■□□□□ 0.02
TMEM38A-203ENST00000599479 IL15P40933 162 aaPredicted RBP15.19■□□□□ 0.02
TMEM38A-203ENST00000599479 ATP8B2P98198 1209 aa15.19■□□□□ 0.02
TMEM38A-203ENST00000599479 POLA2Q14181 598 aa15.19■□□□□ 0.02
TMEM38A-203ENST00000599479 METTL24Q5JXM2 366 aa15.19■□□□□ 0.02
TMEM38A-203ENST00000599479 DCAF8Q5TAQ9 597 aa15.19■□□□□ 0.02
TMEM38A-203ENST00000599479 FBXO33Q7Z6M2 555 aa15.19■□□□□ 0.02
TMEM38A-203ENST00000599479 ITPRIPQ8IWB1 547 aa15.19■□□□□ 0.02
TMEM38A-203ENST00000599479 PNMA6EA0A0J9YXQ4 647 aa15.18■□□□□ 0.02
TMEM38A-203ENST00000599479 ZBTB22O15209 634 aa15.18■□□□□ 0.02
TMEM38A-203ENST00000599479 ITGBL1O95965 494 aaPredicted RBP15.18■□□□□ 0.02
TMEM38A-203ENST00000599479 HSPA6P17066 643 aa15.18■□□□□ 0.02
TMEM38A-203ENST00000599479 HIRAP54198 1017 aaPredicted RBP15.18■□□□□ 0.02
TMEM38A-203ENST00000599479 ZNF280AP59817 542 aaPredicted RBP15.18■□□□□ 0.02
TMEM38A-203ENST00000599479 MVPQ14764 893 aaKnown RBP15.18■□□□□ 0.02
TMEM38A-203ENST00000599479 TDRD7Q8NHU6 1098 aaKnown RBP15.18■□□□□ 0.02
TMEM38A-203ENST00000599479 SSH3Q8TE77 659 aa15.18■□□□□ 0.02
TMEM38A-203ENST00000599479 PA2G4Q9UQ80 394 aaKnown RBP15.18■□□□□ 0.02
TMEM38A-203ENST00000599479 SCN9AQ15858 1988 aa15.18■□□□□ 0.02
TMEM38A-203ENST00000599479 SHTN1A0MZ66 631 aa15.17■□□□□ 0.02
TMEM38A-203ENST00000599479 SASH1O94885 1247 aa15.17■□□□□ 0.02
TMEM38A-203ENST00000599479 MMP14P50281 582 aa15.17■□□□□ 0.02
TMEM38A-203ENST00000599479 TTLL5Q6EMB2 1281 aa15.17■□□□□ 0.02
TMEM38A-203ENST00000599479 ZNF804AQ7Z570 1209 aa15.17■□□□□ 0.02
TMEM38A-203ENST00000599479 MICALL2Q8IY33 904 aa15.17■□□□□ 0.02
TMEM38A-203ENST00000599479 ZC3H15Q8WU90 426 aaKnown RBP15.17■□□□□ 0.02
TMEM38A-203ENST00000599479 ZBTB40Q9NUA8 1239 aa15.17■□□□□ 0.02
TMEM38A-203ENST00000599479 CEP350Q5VT06 3117 aa15.17■□□□□ 0.02
TMEM38A-203ENST00000599479 SPEF2Q9C093 1822 aa15.17■□□□□ 0.02
TMEM38A-203ENST00000599479 ADAMTSL1Q8N6G6 1762 aa15.16■□□□□ 0.02
TMEM38A-203ENST00000599479 H7C1D1 291 aa15.16■□□□□ 0.02
TMEM38A-203ENST00000599479 HIBADHP31937 336 aaKnown RBP15.16■□□□□ 0.02
TMEM38A-203ENST00000599479 FKBP1AP62942 108 aaKnown RBP15.16■□□□□ 0.02
TMEM38A-203ENST00000599479 PUM3Q15397 648 aaKnown RBP15.16■□□□□ 0.02
TMEM38A-203ENST00000599479 CEP126Q9P2H0 1117 aa15.16■□□□□ 0.02
TMEM38A-203ENST00000599479 FAM205AQ6ZU69 1335 aa15.16■□□□□ 0.02
TMEM38A-203ENST00000599479 GYG1P46976 350 aa15.15■□□□□ 0.02
TMEM38A-203ENST00000599479 GTF2IP78347 998 aa15.15■□□□□ 0.02
TMEM38A-203ENST00000599479 EAPPQ56P03 285 aaPredicted RBP15.15■□□□□ 0.02
TMEM38A-203ENST00000599479 C20orf194Q5TEA3 1177 aa15.15■□□□□ 0.02
TMEM38A-203ENST00000599479 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.15■□□□□ 0.02
TMEM38A-203ENST00000599479 LPIN2Q92539 896 aa15.15■□□□□ 0.02
TMEM38A-203ENST00000599479 YTHDC1Q96MU7 727 aaKnown RBP15.15■□□□□ 0.02
TMEM38A-203ENST00000599479 SIL1Q9H173 461 aa15.15■□□□□ 0.02
TMEM38A-203ENST00000599479 DDX19BQ9UMR2 479 aa15.15■□□□□ 0.02
TMEM38A-203ENST00000599479 NOP58Q9Y2X3 529 aaKnown RBP15.15■□□□□ 0.02
TMEM38A-203ENST00000599479 MYO3BQ8WXR4 1341 aa15.15■□□□□ 0.02
TMEM38A-203ENST00000599479 PASKQ96RG2 1323 aa15.15■□□□□ 0.02
TMEM38A-203ENST00000599479 A0A1B0GUL6 1792 aa15.14■□□□□ 0.01
TMEM38A-203ENST00000599479 EGFRP00533 1210 aa15.14■□□□□ 0.01
TMEM38A-203ENST00000599479 USP17L8P0C7I0 530 aa15.14■□□□□ 0.01
TMEM38A-203ENST00000599479 CEP85Q6P2H3 762 aa15.14■□□□□ 0.01
TMEM38A-203ENST00000599479 SAMD7Q7Z3H4 446 aa15.14■□□□□ 0.01
TMEM38A-203ENST00000599479 CNTROBQ8N137 903 aa15.14■□□□□ 0.01
TMEM38A-203ENST00000599479 TRPM4Q8TD43 1214 aa15.14■□□□□ 0.01
TMEM38A-203ENST00000599479 COG6Q9Y2V7 657 aa15.14■□□□□ 0.01
TMEM38A-203ENST00000599479 IFIT1P09914 478 aaKnown RBP15.13■□□□□ 0.01
TMEM38A-203ENST00000599479 CERS5Q8N5B7 392 aa15.13■□□□□ 0.01
TMEM38A-203ENST00000599479 MXD3Q9BW11 206 aa15.13■□□□□ 0.01
TMEM38A-203ENST00000599479 C1orf115Q9H7X2 142 aa15.13■□□□□ 0.01
TMEM38A-203ENST00000599479 BCAMP50895 628 aa15.12■□□□□ 0.01
TMEM38A-203ENST00000599479 APLP1P51693 650 aa15.12■□□□□ 0.01
TMEM38A-203ENST00000599479 CAVIN4Q5BKX8 364 aa15.12■□□□□ 0.01
TMEM38A-203ENST00000599479 MAP1SQ66K74 1059 aaPredicted RBP15.12■□□□□ 0.01
TMEM38A-203ENST00000599479 CHMP4BQ9H444 224 aaKnown RBP15.12■□□□□ 0.01
TMEM38A-203ENST00000599479 CLEC11AQ9Y240 323 aa15.12■□□□□ 0.01
TMEM38A-203ENST00000599479 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.12■□□□□ 0.01
TMEM38A-203ENST00000599479 PSME4Q14997 1843 aa15.12■□□□□ 0.01
TMEM38A-203ENST00000599479 SLC5A1P13866 664 aa15.11■□□□□ 0.01
TMEM38A-203ENST00000599479 ATP2B3Q16720 1220 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms