RNA–Protein interactions for RNA: ENST00000594511.1

XRCC1-204, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 4

Gene XRCC1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-204ENST00000594511 ZNF646O15015 1829 aaPredicted RBP13.9□□□□□ -0.18
XRCC1-204ENST00000594511 KLRK1P26718 216 aa13.9□□□□□ -0.18
XRCC1-204ENST00000594511 CXCL9Q07325 125 aa13.9□□□□□ -0.18
XRCC1-204ENST00000594511 G3BP1Q13283 466 aaKnown RBP eCLIP13.9□□□□□ -0.18
XRCC1-204ENST00000594511 L3MBTL3Q96JM7 780 aaPredicted RBP13.9□□□□□ -0.18
XRCC1-204ENST00000594511 SIL1Q9H173 461 aa13.9□□□□□ -0.18
XRCC1-204ENST00000594511 CD209Q9NNX6 404 aa13.9□□□□□ -0.18
XRCC1-204ENST00000594511 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.9□□□□□ -0.18
XRCC1-204ENST00000594511 SCN9AQ15858 1988 aa13.9□□□□□ -0.18
XRCC1-204ENST00000594511 WDR90Q96KV7 1748 aa13.9□□□□□ -0.18
XRCC1-204ENST00000594511 RIMBP2O15034 1052 aa13.89□□□□□ -0.19
XRCC1-204ENST00000594511 ECE2O60344 883 aa13.89□□□□□ -0.19
XRCC1-204ENST00000594511 SURF6O75683 361 aaKnown RBP13.89□□□□□ -0.19
XRCC1-204ENST00000594511 HSP90AB4PQ58FF6 505 aa13.89□□□□□ -0.19
XRCC1-204ENST00000594511 DPY19L2Q6NUT2 758 aa13.89□□□□□ -0.19
XRCC1-204ENST00000594511 GPC2Q8N158 579 aa13.89□□□□□ -0.19
XRCC1-204ENST00000594511 TDRD7Q8NHU6 1098 aaKnown RBP13.89□□□□□ -0.19
XRCC1-204ENST00000594511 DCTPP1Q9H773 170 aa13.89□□□□□ -0.19
XRCC1-204ENST00000594511 ZNF541Q9H0D2 1346 aa13.89□□□□□ -0.19
XRCC1-204ENST00000594511 POTECB2RU33 542 aa13.88□□□□□ -0.19
XRCC1-204ENST00000594511 RAB11FIP3O75154 756 aa13.88□□□□□ -0.19
XRCC1-204ENST00000594511 VIL1P09327 827 aaKnown RBP13.88□□□□□ -0.19
XRCC1-204ENST00000594511 IFIT1P09914 478 aaKnown RBP13.88□□□□□ -0.19
XRCC1-204ENST00000594511 KCNJ4P48050 445 aa13.88□□□□□ -0.19
XRCC1-204ENST00000594511 EIF6P56537 245 aaKnown RBP13.88□□□□□ -0.19
XRCC1-204ENST00000594511 TFCP2Q12800 502 aa13.88□□□□□ -0.19
XRCC1-204ENST00000594511 DOK7Q18PE1 504 aa13.88□□□□□ -0.19
XRCC1-204ENST00000594511 EXOC6Q8TAG9 804 aa13.88□□□□□ -0.19
XRCC1-204ENST00000594511 DBNDD1Q9H9R9 158 aa13.88□□□□□ -0.19
XRCC1-204ENST00000594511 AKAP2Q9Y2D5 859 aa13.88□□□□□ -0.19
XRCC1-204ENST00000594511 ARAP2Q8WZ64 1704 aa13.87□□□□□ -0.19
XRCC1-204ENST00000594511 HDAC1Q13547 482 aaPredicted RBP13.87□□□□□ -0.19
XRCC1-204ENST00000594511 TNIP1Q15025 636 aa13.87□□□□□ -0.19
XRCC1-204ENST00000594511 ATP2B3Q16720 1220 aa13.87□□□□□ -0.19
XRCC1-204ENST00000594511 CIAPIN1Q6FI81 312 aa13.87□□□□□ -0.19
XRCC1-204ENST00000594511 ERC1Q8IUD2 1116 aa13.87□□□□□ -0.19
XRCC1-204ENST00000594511 ZNF784Q8NCA9 323 aaPredicted RBP13.87□□□□□ -0.19
XRCC1-204ENST00000594511 GMLQ99445 158 aa13.87□□□□□ -0.19
XRCC1-204ENST00000594511 KCNQ5Q9NR82 932 aa13.87□□□□□ -0.19
XRCC1-204ENST00000594511 FAM205AQ6ZU69 1335 aa13.87□□□□□ -0.19
XRCC1-204ENST00000594511 KDM2BQ8NHM5 1336 aa13.87□□□□□ -0.19
XRCC1-204ENST00000594511 DDNO94850 711 aaPredicted RBP13.86□□□□□ -0.19
XRCC1-204ENST00000594511 SLC5A1P13866 664 aa13.86□□□□□ -0.19
XRCC1-204ENST00000594511 HIBADHP31937 336 aaKnown RBP13.86□□□□□ -0.19
XRCC1-204ENST00000594511 FKBP1AP62942 108 aaKnown RBP13.86□□□□□ -0.19
XRCC1-204ENST00000594511 STRIP1Q5VSL9 837 aa13.86□□□□□ -0.19
XRCC1-204ENST00000594511 ZNF804AQ7Z570 1209 aa13.86□□□□□ -0.19
XRCC1-204ENST00000594511 DPF2Q92785 391 aa13.86□□□□□ -0.19
XRCC1-204ENST00000594511 SCN4AP35499 1836 aa13.85□□□□□ -0.19
XRCC1-204ENST00000594511 A0A1B0GUL7 405 aa13.85□□□□□ -0.19
XRCC1-204ENST00000594511 USP17L3A6NCW0 530 aa13.85□□□□□ -0.19
XRCC1-204ENST00000594511 USP17L4A6NCW7 530 aa13.85□□□□□ -0.19
XRCC1-204ENST00000594511 PSMD14O00487 310 aa13.85□□□□□ -0.19
XRCC1-204ENST00000594511 RPS12P25398 132 aaKnown RBP13.85□□□□□ -0.19
XRCC1-204ENST00000594511 GYG1P46976 350 aa13.85□□□□□ -0.19
XRCC1-204ENST00000594511 MMP14P50281 582 aa13.85□□□□□ -0.19
XRCC1-204ENST00000594511 TIMM10P62072 90 aa13.85□□□□□ -0.19
XRCC1-204ENST00000594511 TNNI3KQ59H18 835 aa13.85□□□□□ -0.19
XRCC1-204ENST00000594511 DACT2Q5SW24 774 aa13.85□□□□□ -0.19
XRCC1-204ENST00000594511 USP17L1Q7RTZ2 530 aa13.85□□□□□ -0.19
XRCC1-204ENST00000594511 RHPN1Q8TCX5 695 aa13.85□□□□□ -0.19
XRCC1-204ENST00000594511 KIF1BPQ96EK5 621 aa13.85□□□□□ -0.19
XRCC1-204ENST00000594511 EXOC6BQ9Y2D4 811 aa13.85□□□□□ -0.19
XRCC1-204ENST00000594511 FPGT-TNNI3KV9GXZ4 949 aa13.85□□□□□ -0.19
XRCC1-204ENST00000594511 RAD17O75943 681 aa13.84□□□□□ -0.19
XRCC1-204ENST00000594511 BCAMP50895 628 aa13.84□□□□□ -0.19
XRCC1-204ENST00000594511 CAVIN4Q5BKX8 364 aa13.84□□□□□ -0.19
XRCC1-204ENST00000594511 AGBL3Q8NEM8 1001 aa13.84□□□□□ -0.19
XRCC1-204ENST00000594511 EAF2Q96CJ1 260 aaPredicted RBP13.84□□□□□ -0.19
XRCC1-204ENST00000594511 XAGE2Q96GT9 111 aa13.84□□□□□ -0.19
XRCC1-204ENST00000594511 ZNF512BQ96KM6 892 aaPredicted RBP13.84□□□□□ -0.19
XRCC1-204ENST00000594511 PDS5AQ29RF7 1337 aaKnown RBP13.84□□□□□ -0.19
XRCC1-204ENST00000594511 SEMA3EO15041 775 aa13.83□□□□□ -0.2
XRCC1-204ENST00000594511 VEGFAP15692 232 aaPredicted RBP13.83□□□□□ -0.2
XRCC1-204ENST00000594511 ADORA1P30542 326 aa13.83□□□□□ -0.2
XRCC1-204ENST00000594511 SCNN1DP51172 638 aa13.83□□□□□ -0.2
XRCC1-204ENST00000594511 TTLL5Q6EMB2 1281 aa13.83□□□□□ -0.2
XRCC1-204ENST00000594511 RSBN1LQ6PCB5 846 aaPredicted RBP13.83□□□□□ -0.2
XRCC1-204ENST00000594511 G3V3G9 751 aa13.82□□□□□ -0.2
XRCC1-204ENST00000594511 KIF3CO14782 793 aa13.82□□□□□ -0.2
XRCC1-204ENST00000594511 CENPBP07199 599 aaPredicted RBP13.82□□□□□ -0.2
XRCC1-204ENST00000594511 DCAF8Q5TAQ9 597 aa13.82□□□□□ -0.2
XRCC1-204ENST00000594511 CCDC102BQ68D86 513 aa13.82□□□□□ -0.2
XRCC1-204ENST00000594511 GPRC5DQ9NZD1 345 aa13.82□□□□□ -0.2
XRCC1-204ENST00000594511 MYO3BQ8WXR4 1341 aa13.82□□□□□ -0.2
XRCC1-204ENST00000594511 ARID4AP29374 1257 aaPredicted RBP13.81□□□□□ -0.2
XRCC1-204ENST00000594511 PHKA1P46020 1223 aa13.81□□□□□ -0.2
XRCC1-204ENST00000594511 GMPSP49915 693 aaPredicted RBP13.81□□□□□ -0.2
XRCC1-204ENST00000594511 ZNF280AP59817 542 aaPredicted RBP13.81□□□□□ -0.2
XRCC1-204ENST00000594511 OS9Q13438 667 aaPredicted RBP13.81□□□□□ -0.2
XRCC1-204ENST00000594511 SMC5Q8IY18 1101 aa13.81□□□□□ -0.2
XRCC1-204ENST00000594511 RRAGCQ9HB90 399 aa13.81□□□□□ -0.2
XRCC1-204ENST00000594511 NMRK2Q9NPI5 230 aa13.81□□□□□ -0.2
XRCC1-204ENST00000594511 IQCA1LA6NCM1 817 aa13.8□□□□□ -0.2
XRCC1-204ENST00000594511 GTF2IP78347 998 aa13.8□□□□□ -0.2
XRCC1-204ENST00000594511 CERS5Q8N5B7 392 aa13.8□□□□□ -0.2
XRCC1-204ENST00000594511 GCC1Q96CN9 775 aa13.8□□□□□ -0.2
XRCC1-204ENST00000594511 MRIQ9BWK5 157 aa13.8□□□□□ -0.2
XRCC1-204ENST00000594511 RWDD1Q9H446 243 aaPredicted RBP13.8□□□□□ -0.2
XRCC1-204ENST00000594511 TAF1DQ9H5J8 278 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms