RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 POTEJP0CG39 1038 aa27.36■■□□□ 1.97
HOMER3-206ENST00000594439 MS4A1P11836 297 aa27.36■■□□□ 1.97
HOMER3-206ENST00000594439 GPRC5DQ9NZD1 345 aa27.36■■□□□ 1.97
HOMER3-206ENST00000594439 ZNF646O15015 1829 aaPredicted RBP27.36■■□□□ 1.97
HOMER3-206ENST00000594439 ADAMTSL1Q8N6G6 1762 aa27.35■■□□□ 1.97
HOMER3-206ENST00000594439 UBE4AQ14139 1066 aa27.35■■□□□ 1.97
HOMER3-206ENST00000594439 METTL24Q5JXM2 366 aa27.35■■□□□ 1.97
HOMER3-206ENST00000594439 VGLL2Q8N8G2 317 aa27.35■■□□□ 1.97
HOMER3-206ENST00000594439 VIL1P09327 827 aaKnown RBP27.34■■□□□ 1.97
HOMER3-206ENST00000594439 FSTL1Q12841 308 aa27.34■■□□□ 1.97
HOMER3-206ENST00000594439 SMC1BQ8NDV3 1235 aa27.34■■□□□ 1.97
HOMER3-206ENST00000594439 ZBTB12Q9Y330 459 aaPredicted RBP27.34■■□□□ 1.97
HOMER3-206ENST00000594439 SRGAP3O43295 1099 aa27.33■■□□□ 1.97
HOMER3-206ENST00000594439 ATG9AQ7Z3C6 839 aa27.33■■□□□ 1.97
HOMER3-206ENST00000594439 COPRSQ9NQ92 184 aa27.33■■□□□ 1.97
HOMER3-206ENST00000594439 FBXO3Q9UK99 471 aa27.33■■□□□ 1.97
HOMER3-206ENST00000594439 PA2G4Q9UQ80 394 aaKnown RBP27.33■■□□□ 1.97
HOMER3-206ENST00000594439 CIAO1O76071 339 aa27.32■■□□□ 1.96
HOMER3-206ENST00000594439 PDE8BO95263 885 aa27.32■■□□□ 1.96
HOMER3-206ENST00000594439 PNMA8AQ86V59 439 aaPredicted RBP27.32■■□□□ 1.96
HOMER3-206ENST00000594439 DPF2Q92785 391 aa27.32■■□□□ 1.96
HOMER3-206ENST00000594439 ZNF609O15014 1411 aa27.32■■□□□ 1.96
HOMER3-206ENST00000594439 USP17L3A6NCW0 530 aa27.31■■□□□ 1.96
HOMER3-206ENST00000594439 USP17L4A6NCW7 530 aa27.31■■□□□ 1.96
HOMER3-206ENST00000594439 RPS12P25398 132 aaKnown RBP27.31■■□□□ 1.96
HOMER3-206ENST00000594439 EAPPQ56P03 285 aaPredicted RBP27.31■■□□□ 1.96
HOMER3-206ENST00000594439 USP17L1Q7RTZ2 530 aa27.31■■□□□ 1.96
HOMER3-206ENST00000594439 SIL1Q9H173 461 aa27.31■■□□□ 1.96
HOMER3-206ENST00000594439 CD209Q9NNX6 404 aa27.31■■□□□ 1.96
HOMER3-206ENST00000594439 SHTN1A0MZ66 631 aa27.3■■□□□ 1.96
HOMER3-206ENST00000594439 RSBN1LQ6PCB5 846 aaPredicted RBP27.3■■□□□ 1.96
HOMER3-206ENST00000594439 LDHDQ86WU2 507 aa27.3■■□□□ 1.96
HOMER3-206ENST00000594439 C1orf115Q9H7X2 142 aa27.3■■□□□ 1.96
HOMER3-206ENST00000594439 ADARB2Q9NS39 739 aaKnown RBP27.3■■□□□ 1.96
HOMER3-206ENST00000594439 CNOT7Q9UIV1 285 aaKnown RBP27.3■■□□□ 1.96
HOMER3-206ENST00000594439 PNMA6EA0A0J9YXQ4 647 aa27.29■■□□□ 1.96
HOMER3-206ENST00000594439 MVPQ14764 893 aaKnown RBP27.29■■□□□ 1.96
HOMER3-206ENST00000594439 CHADLQ6NUI6 762 aa27.29■■□□□ 1.96
HOMER3-206ENST00000594439 ZNF804AQ7Z570 1209 aa27.29■■□□□ 1.96
HOMER3-206ENST00000594439 USP50Q70EL3 339 aaPredicted RBP27.28■■□□□ 1.96
HOMER3-206ENST00000594439 MICALL2Q8IY33 904 aa27.28■■□□□ 1.96
HOMER3-206ENST00000594439 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.28■■□□□ 1.96
HOMER3-206ENST00000594439 IL1R1P14778 569 aa27.27■■□□□ 1.96
HOMER3-206ENST00000594439 FGFR2P21802 821 aa27.27■■□□□ 1.96
HOMER3-206ENST00000594439 DACT2Q5SW24 774 aa27.27■■□□□ 1.96
HOMER3-206ENST00000594439 STRIP1Q5VSL9 837 aa27.27■■□□□ 1.96
HOMER3-206ENST00000594439 AGBL3Q8NEM8 1001 aa27.27■■□□□ 1.96
HOMER3-206ENST00000594439 FAM84BQ96KN1 310 aaPredicted RBP27.27■■□□□ 1.96
HOMER3-206ENST00000594439 GMLQ99445 158 aa27.27■■□□□ 1.96
HOMER3-206ENST00000594439 COG6Q9Y2V7 657 aa27.27■■□□□ 1.96
HOMER3-206ENST00000594439 IL15P40933 162 aaPredicted RBP27.26■■□□□ 1.95
HOMER3-206ENST00000594439 GYG1P46976 350 aa27.26■■□□□ 1.95
HOMER3-206ENST00000594439 ATP8B2P98198 1209 aa27.26■■□□□ 1.95
HOMER3-206ENST00000594439 PDE3AQ14432 1141 aa27.26■■□□□ 1.95
HOMER3-206ENST00000594439 PUM3Q15397 648 aaKnown RBP27.26■■□□□ 1.95
HOMER3-206ENST00000594439 C20orf194Q5TEA3 1177 aa27.26■■□□□ 1.95
HOMER3-206ENST00000594439 CLEC11AQ9Y240 323 aa27.26■■□□□ 1.95
HOMER3-206ENST00000594439 H7C1D1 291 aa27.25■■□□□ 1.95
HOMER3-206ENST00000594439 HSPA6P17066 643 aa27.25■■□□□ 1.95
HOMER3-206ENST00000594439 MXD3Q9BW11 206 aa27.25■■□□□ 1.95
HOMER3-206ENST00000594439 DDX19BQ9UMR2 479 aa27.25■■□□□ 1.95
HOMER3-206ENST00000594439 HIBADHP31937 336 aaKnown RBP27.24■■□□□ 1.95
HOMER3-206ENST00000594439 GTF2IP78347 998 aa27.24■■□□□ 1.95
HOMER3-206ENST00000594439 POLA2Q14181 598 aa27.24■■□□□ 1.95
HOMER3-206ENST00000594439 TTLL5Q6EMB2 1281 aa27.24■■□□□ 1.95
HOMER3-206ENST00000594439 TRPM4Q8TD43 1214 aa27.24■■□□□ 1.95
HOMER3-206ENST00000594439 SSH3Q8TE77 659 aa27.24■■□□□ 1.95
HOMER3-206ENST00000594439 FBXW7Q969H0 707 aa27.24■■□□□ 1.95
HOMER3-206ENST00000594439 CEP126Q9P2H0 1117 aa27.24■■□□□ 1.95
HOMER3-206ENST00000594439 HIRAP54198 1017 aaPredicted RBP27.23■■□□□ 1.95
HOMER3-206ENST00000594439 FBXO33Q7Z6M2 555 aa27.23■■□□□ 1.95
HOMER3-206ENST00000594439 SAMD7Q7Z3H4 446 aa27.22■■□□□ 1.95
HOMER3-206ENST00000594439 TDRD7Q8NHU6 1098 aaKnown RBP27.22■■□□□ 1.95
HOMER3-206ENST00000594439 MYO3BQ8WXR4 1341 aa27.21■■□□□ 1.95
HOMER3-206ENST00000594439 IFIT1P09914 478 aaKnown RBP27.21■■□□□ 1.95
HOMER3-206ENST00000594439 ZNF280AP59817 542 aaPredicted RBP27.21■■□□□ 1.95
HOMER3-206ENST00000594439 LPIN2Q92539 896 aa27.21■■□□□ 1.95
HOMER3-206ENST00000594439 EGFRP00533 1210 aa27.2■■□□□ 1.94
HOMER3-206ENST00000594439 SLC5A1P13866 664 aa27.2■■□□□ 1.94
HOMER3-206ENST00000594439 ATP2B3Q16720 1220 aa27.2■■□□□ 1.94
HOMER3-206ENST00000594439 TBC1D10BQ4KMP7 808 aaPredicted RBP27.2■■□□□ 1.94
HOMER3-206ENST00000594439 MAP1SQ66K74 1059 aaPredicted RBP27.2■■□□□ 1.94
HOMER3-206ENST00000594439 CEP85Q6P2H3 762 aa27.2■■□□□ 1.94
HOMER3-206ENST00000594439 ZBTB40Q9NUA8 1239 aa27.2■■□□□ 1.94
HOMER3-206ENST00000594439 SASH1O94885 1247 aa27.19■■□□□ 1.94
HOMER3-206ENST00000594439 ITGBL1O95965 494 aaPredicted RBP27.19■■□□□ 1.94
HOMER3-206ENST00000594439 USP17L8P0C7I0 530 aa27.19■■□□□ 1.94
HOMER3-206ENST00000594439 CAVIN4Q5BKX8 364 aa27.19■■□□□ 1.94
HOMER3-206ENST00000594439 PGAP2Q9UHJ9 254 aa27.19■■□□□ 1.94
HOMER3-206ENST00000594439 ARAP2Q8WZ64 1704 aa27.19■■□□□ 1.94
HOMER3-206ENST00000594439 FAM205AQ6ZU69 1335 aa27.18■■□□□ 1.94
HOMER3-206ENST00000594439 BCAMP50895 628 aa27.18■■□□□ 1.94
HOMER3-206ENST00000594439 CNTROBQ8N137 903 aa27.18■■□□□ 1.94
HOMER3-206ENST00000594439 CERS5Q8N5B7 392 aa27.18■■□□□ 1.94
HOMER3-206ENST00000594439 TFCP2Q12800 502 aa27.17■■□□□ 1.94
HOMER3-206ENST00000594439 G3BP1Q13283 466 aaKnown RBP eCLIP27.17■■□□□ 1.94
HOMER3-206ENST00000594439 RBM26Q5T8P6 1007 aaKnown RBP27.17■■□□□ 1.94
HOMER3-206ENST00000594439 VPS37DQ86XT2 251 aa27.17■■□□□ 1.94
HOMER3-206ENST00000594439 ZC3H15Q8WU90 426 aaKnown RBP27.17■■□□□ 1.94
HOMER3-206ENST00000594439 JAG2Q9Y219 1238 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms