RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 SKILP12757 684 aa14.6□□□□□ -0.07
DNMT1-228ENST00000592705 SYKP43405 635 aa14.6□□□□□ -0.07
DNMT1-228ENST00000592705 CCDC82Q8N4S0 544 aa14.6□□□□□ -0.07
DNMT1-228ENST00000592705 KDM5AP29375 1690 aaKnown RBP14.6□□□□□ -0.07
DNMT1-228ENST00000592705 TUBB4AP04350 444 aa14.59□□□□□ -0.07
DNMT1-228ENST00000592705 UBE2Q2Q8WVN8 375 aa14.59□□□□□ -0.07
DNMT1-228ENST00000592705 KIF24Q5T7B8 1368 aa14.59□□□□□ -0.07
DNMT1-228ENST00000592705 ALDH1B1P30837 517 aa14.59□□□□□ -0.07
DNMT1-228ENST00000592705 ARHGEF6Q15052 776 aa14.59□□□□□ -0.07
DNMT1-228ENST00000592705 TTC12Q9H892 705 aaPredicted RBP14.59□□□□□ -0.07
DNMT1-228ENST00000592705 CALCOCO1Q9P1Z2 691 aa14.59□□□□□ -0.07
DNMT1-228ENST00000592705 HOXC9P31274 260 aa14.59□□□□□ -0.07
DNMT1-228ENST00000592705 MICU3Q86XE3 530 aa14.59□□□□□ -0.07
DNMT1-228ENST00000592705 DNAJC25Q9H1X3 360 aa14.59□□□□□ -0.07
DNMT1-228ENST00000592705 ATP7AQ04656 1500 aa14.59□□□□□ -0.07
DNMT1-228ENST00000592705 EDC4Q6P2E9 1401 aaKnown RBP14.59□□□□□ -0.07
DNMT1-228ENST00000592705 TRIM37O94972 964 aa14.59□□□□□ -0.07
DNMT1-228ENST00000592705 FGFR1OPO95684 399 aaKnown RBP14.59□□□□□ -0.07
DNMT1-228ENST00000592705 DESP17661 470 aa14.59□□□□□ -0.07
DNMT1-228ENST00000592705 DPP8Q6V1X1 898 aaPredicted RBP14.59□□□□□ -0.07
DNMT1-228ENST00000592705 NLGN1Q8N2Q7 840 aa14.59□□□□□ -0.07
DNMT1-228ENST00000592705 BABAM1Q9NWV8 329 aa14.59□□□□□ -0.07
DNMT1-228ENST00000592705 PLXNC1O60486 1568 aa14.58□□□□□ -0.07
DNMT1-228ENST00000592705 ZNF445P59923 1031 aa14.58□□□□□ -0.08
DNMT1-228ENST00000592705 MFSD6Q6ZSS7 791 aa14.58□□□□□ -0.08
DNMT1-228ENST00000592705 LTKP29376 864 aa14.58□□□□□ -0.08
DNMT1-228ENST00000592705 NLRP5P59047 1200 aa14.58□□□□□ -0.08
DNMT1-228ENST00000592705 CPLX3Q8WVH0 158 aa14.58□□□□□ -0.08
DNMT1-228ENST00000592705 TSG101Q99816 390 aa14.58□□□□□ -0.08
DNMT1-228ENST00000592705 TSPY2A6NKD2 308 aa14.58□□□□□ -0.08
DNMT1-228ENST00000592705 IRS4O14654 1257 aaPredicted RBP14.58□□□□□ -0.08
DNMT1-228ENST00000592705 IL15P40933 162 aaPredicted RBP14.58□□□□□ -0.08
DNMT1-228ENST00000592705 SYT1P21579 422 aa14.58□□□□□ -0.08
DNMT1-228ENST00000592705 EYA1Q99502 592 aa14.58□□□□□ -0.08
DNMT1-228ENST00000592705 PA2G4Q9UQ80 394 aaKnown RBP14.58□□□□□ -0.08
DNMT1-228ENST00000592705 USP8P40818 1118 aa14.57□□□□□ -0.08
DNMT1-228ENST00000592705 SLC26A6Q9BXS9 759 aa14.57□□□□□ -0.08
DNMT1-228ENST00000592705 LRRC2Q9BYS8 371 aa14.57□□□□□ -0.08
DNMT1-228ENST00000592705 RBSNQ9H1K0 784 aa14.57□□□□□ -0.08
DNMT1-228ENST00000592705 CCDC194A0A1B0GVG4 234 aa14.57□□□□□ -0.08
DNMT1-228ENST00000592705 USO1O60763 962 aaKnown RBP14.57□□□□□ -0.08
DNMT1-228ENST00000592705 UBASH3AP57075 661 aa14.57□□□□□ -0.08
DNMT1-228ENST00000592705 MSL1Q68DK7 614 aa14.57□□□□□ -0.08
DNMT1-228ENST00000592705 RRAGDQ9NQL2 400 aaPredicted RBP14.57□□□□□ -0.08
DNMT1-228ENST00000592705 PICK1Q9NRD5 415 aa14.57□□□□□ -0.08
DNMT1-228ENST00000592705 ATP2B3Q16720 1220 aa14.57□□□□□ -0.08
DNMT1-228ENST00000592705 TRMT2AQ8IZ69 625 aaKnown RBP14.57□□□□□ -0.08
DNMT1-228ENST00000592705 CHL1O00533 1208 aa14.57□□□□□ -0.08
DNMT1-228ENST00000592705 CA8P35219 290 aa14.57□□□□□ -0.08
DNMT1-228ENST00000592705 OTUD7AQ8TE49 926 aaPredicted RBP14.57□□□□□ -0.08
DNMT1-228ENST00000592705 RAB34Q9BZG1 259 aa14.57□□□□□ -0.08
DNMT1-228ENST00000592705 CENPHQ9H3R5 247 aa14.57□□□□□ -0.08
DNMT1-228ENST00000592705 PICALMQ13492 652 aa14.56□□□□□ -0.08
DNMT1-228ENST00000592705 JARID2Q92833 1246 aaPredicted RBP14.56□□□□□ -0.08
DNMT1-228ENST00000592705 DRC1Q96MC2 740 aa14.56□□□□□ -0.08
DNMT1-228ENST00000592705 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.56□□□□□ -0.08
DNMT1-228ENST00000592705 ECM2O94769 699 aaPredicted RBP14.56□□□□□ -0.08
DNMT1-228ENST00000592705 CCDC144CPQ8IYA2 1237 aa14.56□□□□□ -0.08
DNMT1-228ENST00000592705 ALG1Q9BT22 464 aa14.56□□□□□ -0.08
DNMT1-228ENST00000592705 KDM6BO15054 1643 aa14.56□□□□□ -0.08
DNMT1-228ENST00000592705 UFL1O94874 794 aa14.56□□□□□ -0.08
DNMT1-228ENST00000592705 PLS1Q14651 629 aa14.56□□□□□ -0.08
DNMT1-228ENST00000592705 AOPEPQ8N6M6 819 aa14.56□□□□□ -0.08
DNMT1-228ENST00000592705 KRT23Q9C075 422 aa14.56□□□□□ -0.08
DNMT1-228ENST00000592705 ZBTB43O43298 467 aa14.55□□□□□ -0.08
DNMT1-228ENST00000592705 PPFIA3O75145 1194 aa14.55□□□□□ -0.08
DNMT1-228ENST00000592705 GNG11P61952 73 aa14.55□□□□□ -0.08
DNMT1-228ENST00000592705 KIF22Q14807 665 aa14.55□□□□□ -0.08
DNMT1-228ENST00000592705 ISM2Q6H9L7 571 aa14.55□□□□□ -0.08
DNMT1-228ENST00000592705 KRT222Q8N1A0 295 aa14.55□□□□□ -0.08
DNMT1-228ENST00000592705 BMP15O95972 392 aa14.55□□□□□ -0.08
DNMT1-228ENST00000592705 LMBR1LQ6UX01 489 aa14.55□□□□□ -0.08
DNMT1-228ENST00000592705 CACNA2D4Q7Z3S7 1137 aa14.55□□□□□ -0.08
DNMT1-228ENST00000592705 PAG1Q9NWQ8 432 aa14.55□□□□□ -0.08
DNMT1-228ENST00000592705 IVNS1ABPQ9Y6Y0 642 aa14.55□□□□□ -0.08
DNMT1-228ENST00000592705 POLR3GO15318 223 aaPredicted RBP14.55□□□□□ -0.08
DNMT1-228ENST00000592705 ATL3Q6DD88 541 aa14.55□□□□□ -0.08
DNMT1-228ENST00000592705 G2E3Q7L622 706 aa14.55□□□□□ -0.08
DNMT1-228ENST00000592705 RAB11FIP4Q86YS3 637 aa14.55□□□□□ -0.08
DNMT1-228ENST00000592705 MAGI2Q86UL8 1455 aa14.55□□□□□ -0.08
DNMT1-228ENST00000592705 RTL1A6NKG5 1358 aa14.55□□□□□ -0.08
DNMT1-228ENST00000592705 SH3TC1Q8TE82 1336 aa14.55□□□□□ -0.08
DNMT1-228ENST00000592705 KIF5BP33176 963 aa14.55□□□□□ -0.08
DNMT1-228ENST00000592705 RBM6P78332 1123 aaKnown RBP14.55□□□□□ -0.08
DNMT1-228ENST00000592705 NAA16Q6N069 864 aaPredicted RBP14.55□□□□□ -0.08
DNMT1-228ENST00000592705 CNNM2Q9H8M5 875 aa14.55□□□□□ -0.08
DNMT1-228ENST00000592705 GGA1Q9UJY5 639 aa14.55□□□□□ -0.08
DNMT1-228ENST00000592705 IQSEC3Q9UPP2 1182 aaPredicted RBP14.55□□□□□ -0.08
DNMT1-228ENST00000592705 MAP3K19Q56UN5 1328 aa14.54□□□□□ -0.08
DNMT1-228ENST00000592705 SHTN1A0MZ66 631 aa14.54□□□□□ -0.08
DNMT1-228ENST00000592705 TMEM266Q2M3C6 531 aa14.54□□□□□ -0.08
DNMT1-228ENST00000592705 TMTC2Q8N394 836 aa14.54□□□□□ -0.08
DNMT1-228ENST00000592705 CCDC12Q8WUD4 166 aaPredicted RBP14.54□□□□□ -0.08
DNMT1-228ENST00000592705 CNKSR1Q969H4 720 aa14.54□□□□□ -0.08
DNMT1-228ENST00000592705 SEPT12Q8IYM1 358 aa14.54□□□□□ -0.08
DNMT1-228ENST00000592705 CTAGE1Q96RT6 745 aa14.54□□□□□ -0.08
DNMT1-228ENST00000592705 GOLGA6L7A0A1B0GV03 622 aa14.54□□□□□ -0.08
DNMT1-228ENST00000592705 PPP1R12BO60237 982 aaPredicted RBP14.54□□□□□ -0.08
DNMT1-228ENST00000592705 CCDC178Q5BJE1 867 aa14.54□□□□□ -0.08
DNMT1-228ENST00000592705 KDM5DQ9BY66 1539 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms