RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 CEBPAP49715 358 aaPredicted RBP14.14□□□□□ -0.15
SMARCA4-217ENST00000591595 TEFQ10587 303 aa14.14□□□□□ -0.15
SMARCA4-217ENST00000591595 CPLX2Q6PUV4 134 aaKnown RBP14.14□□□□□ -0.15
SMARCA4-217ENST00000591595 PI4K2BQ8TCG2 481 aa14.14□□□□□ -0.15
SMARCA4-217ENST00000591595 ITSN1Q15811 1721 aa14.14□□□□□ -0.15
SMARCA4-217ENST00000591595 MON2Q7Z3U7 1717 aa14.14□□□□□ -0.15
SMARCA4-217ENST00000591595 ERLIN2O94905 339 aa14.14□□□□□ -0.15
SMARCA4-217ENST00000591595 TBC1D8O95759 1140 aa14.14□□□□□ -0.15
SMARCA4-217ENST00000591595 F13A1P00488 732 aa14.14□□□□□ -0.15
SMARCA4-217ENST00000591595 RUFY3Q7L099 469 aa14.14□□□□□ -0.15
SMARCA4-217ENST00000591595 ERC1Q8IUD2 1116 aa14.14□□□□□ -0.15
SMARCA4-217ENST00000591595 LRRN4CLQ8ND94 238 aa14.14□□□□□ -0.15
SMARCA4-217ENST00000591595 GLRX3O76003 335 aaKnown RBP14.14□□□□□ -0.15
SMARCA4-217ENST00000591595 GJB2P29033 226 aa14.14□□□□□ -0.15
SMARCA4-217ENST00000591595 CACTINQ8WUQ7 758 aaKnown RBP14.14□□□□□ -0.15
SMARCA4-217ENST00000591595 KDRP35968 1356 aa14.13□□□□□ -0.15
SMARCA4-217ENST00000591595 TSPOAP1O95153 1857 aa14.13□□□□□ -0.15
SMARCA4-217ENST00000591595 DNM1Q05193 864 aaKnown RBP14.13□□□□□ -0.15
SMARCA4-217ENST00000591595 DNAJC14Q6Y2X3 702 aaPredicted RBP14.13□□□□□ -0.15
SMARCA4-217ENST00000591595 CCDC26Q8TAB7 109 aa14.13□□□□□ -0.15
SMARCA4-217ENST00000591595 N4BP2L2Q92802 583 aaPredicted RBP14.13□□□□□ -0.15
SMARCA4-217ENST00000591595 SH3GL3Q99963 347 aa14.13□□□□□ -0.15
SMARCA4-217ENST00000591595 FUCA2Q9BTY2 467 aa14.13□□□□□ -0.15
SMARCA4-217ENST00000591595 GCFC2P16383 781 aaKnown RBP14.13□□□□□ -0.15
SMARCA4-217ENST00000591595 ZKSCAN1P17029 563 aaPredicted RBP14.13□□□□□ -0.15
SMARCA4-217ENST00000591595 CC2D2BQ6DHV5 1058 aa14.13□□□□□ -0.15
SMARCA4-217ENST00000591595 KCNV1Q6PIU1 500 aa14.13□□□□□ -0.15
SMARCA4-217ENST00000591595 GPATCH3Q96I76 525 aa14.13□□□□□ -0.15
SMARCA4-217ENST00000591595 LSG1Q9H089 658 aaKnown RBP14.13□□□□□ -0.15
SMARCA4-217ENST00000591595 CYP46A1Q9Y6A2 500 aa14.13□□□□□ -0.15
SMARCA4-217ENST00000591595 MYBL2P10244 700 aa14.13□□□□□ -0.15
SMARCA4-217ENST00000591595 ARMCX6Q7L4S7 300 aa14.13□□□□□ -0.15
SMARCA4-217ENST00000591595 CTCFLQ8NI51 663 aaPredicted RBP14.13□□□□□ -0.15
SMARCA4-217ENST00000591595 UBXN4Q92575 508 aa14.13□□□□□ -0.15
SMARCA4-217ENST00000591595 L2HGDHQ9H9P8 463 aa14.13□□□□□ -0.15
SMARCA4-217ENST00000591595 WWC2Q6AWC2 1192 aa14.12□□□□□ -0.15
SMARCA4-217ENST00000591595 FERMT3Q86UX7 667 aa14.12□□□□□ -0.15
SMARCA4-217ENST00000591595 KLHL23Q8NBE8 558 aa14.12□□□□□ -0.15
SMARCA4-217ENST00000591595 ZNF483Q8TF39 744 aaPredicted RBP14.12□□□□□ -0.15
SMARCA4-217ENST00000591595 TEX13AQ9BXU3 409 aaPredicted RBP14.12□□□□□ -0.15
SMARCA4-217ENST00000591595 ORC3Q9UBD5 711 aaPredicted RBP14.12□□□□□ -0.15
SMARCA4-217ENST00000591595 KINO60870 393 aaKnown RBP14.12□□□□□ -0.15
SMARCA4-217ENST00000591595 LRRC31Q6UY01 552 aa14.12□□□□□ -0.15
SMARCA4-217ENST00000591595 NECAB1Q8N987 351 aa14.12□□□□□ -0.15
SMARCA4-217ENST00000591595 NRKQ7Z2Y5 1582 aa14.12□□□□□ -0.15
SMARCA4-217ENST00000591595 CEP170BQ9Y4F5 1589 aaPredicted RBP14.12□□□□□ -0.15
SMARCA4-217ENST00000591595 NRXN3Q9Y4C0 1643 aa14.12□□□□□ -0.15
SMARCA4-217ENST00000591595 GOLGA6L4A6NEF3 574 aa14.11□□□□□ -0.15
SMARCA4-217ENST00000591595 LARGE1O95461 756 aa14.11□□□□□ -0.15
SMARCA4-217ENST00000591595 EIF5P55010 431 aaKnown RBP14.11□□□□□ -0.15
SMARCA4-217ENST00000591595 A1CFQ9NQ94 594 aaKnown RBP14.11□□□□□ -0.15
SMARCA4-217ENST00000591595 RPAP1Q9BWH6 1393 aaPredicted RBP14.11□□□□□ -0.15
SMARCA4-217ENST00000591595 ANKRD18BA2A2Z9 1011 aa14.11□□□□□ -0.15
SMARCA4-217ENST00000591595 EPB41L2O43491 1005 aaKnown RBP14.11□□□□□ -0.15
SMARCA4-217ENST00000591595 CCNHP51946 323 aaPredicted RBP14.11□□□□□ -0.15
SMARCA4-217ENST00000591595 PSMD2Q13200 908 aa14.11□□□□□ -0.15
SMARCA4-217ENST00000591595 PA2G4Q9UQ80 394 aaKnown RBP14.11□□□□□ -0.15
SMARCA4-217ENST00000591595 SETD1AO15047 1707 aaKnown RBP14.11□□□□□ -0.15
SMARCA4-217ENST00000591595 ECM2O94769 699 aaPredicted RBP14.11□□□□□ -0.15
SMARCA4-217ENST00000591595 RWDD2BP57060 319 aa14.11□□□□□ -0.15
SMARCA4-217ENST00000591595 TRAF1Q13077 416 aa14.11□□□□□ -0.15
SMARCA4-217ENST00000591595 TTC14Q96N46 770 aa14.11□□□□□ -0.15
SMARCA4-217ENST00000591595 LGR6Q9HBX8 967 aa14.11□□□□□ -0.15
SMARCA4-217ENST00000591595 SPATS2LQ9NUQ6 558 aaKnown RBP14.11□□□□□ -0.15
SMARCA4-217ENST00000591595 AGLP35573 1532 aa14.1□□□□□ -0.15
SMARCA4-217ENST00000591595 NF2P35240 595 aa14.1□□□□□ -0.15
SMARCA4-217ENST00000591595 PTH1RQ03431 593 aa14.1□□□□□ -0.15
SMARCA4-217ENST00000591595 SCRN1Q12765 414 aa14.1□□□□□ -0.15
SMARCA4-217ENST00000591595 POLA2Q14181 598 aa14.1□□□□□ -0.15
SMARCA4-217ENST00000591595 TMEM132AQ24JP5 1023 aa14.1□□□□□ -0.15
SMARCA4-217ENST00000591595 ADCK5Q3MIX3 580 aa14.1□□□□□ -0.15
SMARCA4-217ENST00000591595 TRMT1Q9NXH9 659 aaKnown RBP14.1□□□□□ -0.15
SMARCA4-217ENST00000591595 RIMS1Q86UR5 1692 aaKnown RBP14.1□□□□□ -0.15
SMARCA4-217ENST00000591595 KCNQ3O43525 872 aa14.1□□□□□ -0.15
SMARCA4-217ENST00000591595 AACSQ86V21 672 aa14.1□□□□□ -0.15
SMARCA4-217ENST00000591595 ECHDC1Q9NTX5 307 aa14.1□□□□□ -0.15
SMARCA4-217ENST00000591595 ADAMTS13Q76LX8 1427 aa14.1□□□□□ -0.15
SMARCA4-217ENST00000591595 PEAK1Q9H792 1746 aa14.1□□□□□ -0.15
SMARCA4-217ENST00000591595 GRIK3Q13003 919 aa14.09□□□□□ -0.15
SMARCA4-217ENST00000591595 LARP1BQ659C4 914 aaKnown RBP14.09□□□□□ -0.15
SMARCA4-217ENST00000591595 KCNB2Q92953 911 aa14.09□□□□□ -0.15
SMARCA4-217ENST00000591595 FBXW10Q5XX13 1052 aa14.09□□□□□ -0.15
SMARCA4-217ENST00000591595 TCEANC2Q96MN5 208 aa14.09□□□□□ -0.15
SMARCA4-217ENST00000591595 TRIM5Q9C035 493 aa14.09□□□□□ -0.15
SMARCA4-217ENST00000591595 FAM107BQ9H098 131 aa14.09□□□□□ -0.15
SMARCA4-217ENST00000591595 VPS18Q9P253 973 aa14.09□□□□□ -0.15
SMARCA4-217ENST00000591595 MCM8Q9UJA3 840 aa14.09□□□□□ -0.15
SMARCA4-217ENST00000591595 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.09□□□□□ -0.151e-8■■■■□ 21.4
SMARCA4-217ENST00000591595 BTBD11A6QL63 1104 aa14.09□□□□□ -0.15
SMARCA4-217ENST00000591595 AP1G2O75843 785 aa14.09□□□□□ -0.15
SMARCA4-217ENST00000591595 CAMK4Q16566 473 aa14.09□□□□□ -0.15
SMARCA4-217ENST00000591595 BEND3Q5T5X7 828 aa14.09□□□□□ -0.15
SMARCA4-217ENST00000591595 MPRIPQ6WCQ1 1025 aa14.09□□□□□ -0.15
SMARCA4-217ENST00000591595 TRIM74Q86UV6 250 aa14.09□□□□□ -0.15
SMARCA4-217ENST00000591595 TRIM73Q86UV7 250 aa14.09□□□□□ -0.15
SMARCA4-217ENST00000591595 TMEM87AQ8NBN3 555 aa14.09□□□□□ -0.15
SMARCA4-217ENST00000591595 HYPKQ9NX55 129 aa14.09□□□□□ -0.15
SMARCA4-217ENST00000591595 AKAP12Q02952 1782 aa14.08□□□□□ -0.15
SMARCA4-217ENST00000591595 H3BQF6 201 aa14.08□□□□□ -0.15
SMARCA4-217ENST00000591595 LIG3P49916 1009 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms