RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 MAP2K3P46734 347 aa5.12□□□□□ -1.59
ZNF540-207ENST00000589285 TTC39BQ5VTQ0 682 aaPredicted RBP5.12□□□□□ -1.59
ZNF540-207ENST00000589285 TTC16Q8NEE8 873 aa5.12□□□□□ -1.59
ZNF540-207ENST00000589285 OR13H1Q8NG92 308 aa5.12□□□□□ -1.59
ZNF540-207ENST00000589285 PNMA6FA0A0J9YX94 578 aa5.12□□□□□ -1.59
ZNF540-207ENST00000589285 EPHA1P21709 976 aa5.12□□□□□ -1.59
ZNF540-207ENST00000589285 EHHADHQ08426 723 aa5.12□□□□□ -1.59
ZNF540-207ENST00000589285 HIF1AQ16665 826 aa5.12□□□□□ -1.59
ZNF540-207ENST00000589285 ELMSAN1Q6PJG2 1045 aa5.12□□□□□ -1.59
ZNF540-207ENST00000589285 TNFRSF25Q93038 417 aa5.12□□□□□ -1.59
ZNF540-207ENST00000589285 MTMR7Q9Y216 660 aa5.12□□□□□ -1.59
ZNF540-207ENST00000589285 GRIA4P48058 902 aa5.11□□□□□ -1.59
ZNF540-207ENST00000589285 TRPM4Q8TD43 1214 aa5.11□□□□□ -1.59
ZNF540-207ENST00000589285 SLC7A3Q8WY07 619 aa5.11□□□□□ -1.59
ZNF540-207ENST00000589285 EGFL7Q9UHF1 273 aa5.11□□□□□ -1.59
ZNF540-207ENST00000589285 DCTN4Q9UJW0 460 aa5.11□□□□□ -1.59
ZNF540-207ENST00000589285 GDF2Q9UK05 429 aaPredicted RBP5.11□□□□□ -1.59
ZNF540-207ENST00000589285 GPC6Q9Y625 555 aaPredicted RBP5.11□□□□□ -1.59
ZNF540-207ENST00000589285 NFKBIEO00221 500 aa5.11□□□□□ -1.59
ZNF540-207ENST00000589285 KCNA1Q09470 495 aa5.11□□□□□ -1.59
ZNF540-207ENST00000589285 C20orf204Q6ZNR8 217 aa5.11□□□□□ -1.59
ZNF540-207ENST00000589285 CEP120Q8N960 986 aa5.11□□□□□ -1.59
ZNF540-207ENST00000589285 PLVAPQ9BX97 442 aa5.11□□□□□ -1.59
ZNF540-207ENST00000589285 PHF20L1A8MW92 1017 aa5.1□□□□□ -1.59
ZNF540-207ENST00000589285 RGS9O75916 674 aaPredicted RBP5.1□□□□□ -1.59
ZNF540-207ENST00000589285 EGFRP00533 1210 aa5.1□□□□□ -1.59
ZNF540-207ENST00000589285 GSK3AP49840 483 aa5.1□□□□□ -1.59
ZNF540-207ENST00000589285 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.1□□□□□ -1.59
ZNF540-207ENST00000589285 FAM129BQ96TA1 746 aa5.1□□□□□ -1.59
ZNF540-207ENST00000589285 OSMRQ99650 979 aa5.1□□□□□ -1.59
ZNF540-207ENST00000589285 DZANK1Q9NVP4 752 aa5.1□□□□□ -1.59
ZNF540-207ENST00000589285 NSFL1CQ9UNZ2 370 aaKnown RBP5.1□□□□□ -1.59
ZNF540-207ENST00000589285 ARHGEF11O15085 1522 aa5.1□□□□□ -1.59
ZNF540-207ENST00000589285 GPLD1P80108 840 aa5.1□□□□□ -1.59
ZNF540-207ENST00000589285 LAMC2Q13753 1193 aa5.1□□□□□ -1.59
ZNF540-207ENST00000589285 GRIK5Q16478 980 aa5.1□□□□□ -1.59
ZNF540-207ENST00000589285 PDE12Q6L8Q7 609 aaKnown RBP5.1□□□□□ -1.59
ZNF540-207ENST00000589285 DNAJC14Q6Y2X3 702 aaPredicted RBP5.1□□□□□ -1.59
ZNF540-207ENST00000589285 AQRO60306 1485 aaKnown RBP eCLIP5.1□□□□□ -1.59
ZNF540-207ENST00000589285 CUX1P39880 1505 aa5.1□□□□□ -1.59
ZNF540-207ENST00000589285 ECEL1O95672 775 aa5.1□□□□□ -1.59
ZNF540-207ENST00000589285 CCDC27Q2M243 656 aa5.1□□□□□ -1.59
ZNF540-207ENST00000589285 NXPE4Q6UWF7 544 aa5.1□□□□□ -1.59
ZNF540-207ENST00000589285 LINC00114Q6XXX2 140 aa5.1□□□□□ -1.59
ZNF540-207ENST00000589285 PODXL2Q9NZ53 605 aa5.1□□□□□ -1.59
ZNF540-207ENST00000589285 FGD5Q6ZNL6 1462 aa5.09□□□□□ -1.59
ZNF540-207ENST00000589285 LINC01387J3KSC0 135 aa5.09□□□□□ -1.59
ZNF540-207ENST00000589285 LILRB5O75023 590 aa5.09□□□□□ -1.59
ZNF540-207ENST00000589285 DEAF1O75398 565 aaPredicted RBP5.09□□□□□ -1.59
ZNF540-207ENST00000589285 ALX3O95076 343 aa5.09□□□□□ -1.59
ZNF540-207ENST00000589285 NID1P14543 1247 aa5.09□□□□□ -1.59
ZNF540-207ENST00000589285 BAG6P46379 1132 aa5.09□□□□□ -1.59
ZNF540-207ENST00000589285 DLL1O00548 723 aa5.08□□□□□ -1.6
ZNF540-207ENST00000589285 TREHO43280 583 aa5.08□□□□□ -1.6
ZNF540-207ENST00000589285 MFAP1P55081 439 aaKnown RBP5.08□□□□□ -1.6
ZNF540-207ENST00000589285 NEUROD1Q13562 356 aa5.08□□□□□ -1.6
ZNF540-207ENST00000589285 TRAPPC3LQ5T215 181 aa5.08□□□□□ -1.6
ZNF540-207ENST00000589285 ALKBH2Q6NS38 261 aa5.08□□□□□ -1.6
ZNF540-207ENST00000589285 GALNT11Q8NCW6 608 aa5.08□□□□□ -1.6
ZNF540-207ENST00000589285 CCDC74AQ96AQ1 378 aa5.08□□□□□ -1.6
ZNF540-207ENST00000589285 ZC3H12CQ9C0D7 883 aaKnown RBP5.08□□□□□ -1.6
ZNF540-207ENST00000589285 MUC3BQ9H195 1237 aa5.08□□□□□ -1.6
ZNF540-207ENST00000589285 KCNK4Q9NYG8 393 aa5.08□□□□□ -1.6
ZNF540-207ENST00000589285 FNDC3AQ9Y2H6 1198 aaKnown RBP5.08□□□□□ -1.6
ZNF540-207ENST00000589285 ABCA10Q8WWZ4 1543 aa5.08□□□□□ -1.6
ZNF540-207ENST00000589285 GHRHP01286 108 aa5.08□□□□□ -1.6
ZNF540-207ENST00000589285 ITGB2P05107 769 aa5.08□□□□□ -1.6
ZNF540-207ENST00000589285 MPRIPQ6WCQ1 1025 aa5.08□□□□□ -1.6
ZNF540-207ENST00000589285 AGGF1Q8N302 714 aaeCLIP5.08□□□□□ -1.6
ZNF540-207ENST00000589285 IL22RA1Q8N6P7 574 aa5.08□□□□□ -1.6
ZNF540-207ENST00000589285 OSBPL7Q9BZF2 842 aa5.08□□□□□ -1.6
ZNF540-207ENST00000589285 ERICH3Q5RHP9 1530 aa5.08□□□□□ -1.6
ZNF540-207ENST00000589285 CHRNA4P43681 627 aa5.08□□□□□ -1.6
ZNF540-207ENST00000589285 TMCO4Q5TGY1 634 aa5.08□□□□□ -1.6
ZNF540-207ENST00000589285 SNX29Q8TEQ0 813 aa5.08□□□□□ -1.6
ZNF540-207ENST00000589285 ZFYVE28Q9HCC9 887 aa5.08□□□□□ -1.6
ZNF540-207ENST00000589285 ZBTB7CA1YPR0 619 aa5.07□□□□□ -1.6
ZNF540-207ENST00000589285 ADARB2-AS1A8MUL3 147 aa5.07□□□□□ -1.6
ZNF540-207ENST00000589285 PCSK2P16519 638 aa5.07□□□□□ -1.6
ZNF540-207ENST00000589285 ALAS2P22557 587 aa5.07□□□□□ -1.6
ZNF540-207ENST00000589285 NRLP54845 237 aa5.07□□□□□ -1.6
ZNF540-207ENST00000589285 NLRP12P59046 1061 aa5.07□□□□□ -1.6
ZNF540-207ENST00000589285 DSC3Q14574 896 aa5.07□□□□□ -1.6
ZNF540-207ENST00000589285 NPAS4Q8IUM7 802 aa5.07□□□□□ -1.6
ZNF540-207ENST00000589285 SPACA7Q96KW9 195 aa5.07□□□□□ -1.6
ZNF540-207ENST00000589285 RBCK1Q9BYM8 510 aa5.07□□□□□ -1.6
ZNF540-207ENST00000589285 ZNF608Q9ULD9 1512 aaPredicted RBP5.07□□□□□ -1.6
ZNF540-207ENST00000589285 WISP1O95388 367 aa5.07□□□□□ -1.6
ZNF540-207ENST00000589285 A0A1W2PP55 124 aa5.06□□□□□ -1.6
ZNF540-207ENST00000589285 MAP3K6O95382 1288 aa5.06□□□□□ -1.6
ZNF540-207ENST00000589285 MAPKBP1O60336 1514 aa5.06□□□□□ -1.6
ZNF540-207ENST00000589285 POLA1P09884 1462 aaPredicted RBP5.06□□□□□ -1.6
ZNF540-207ENST00000589285 ADAMTS12P58397 1594 aa5.06□□□□□ -1.6
ZNF540-207ENST00000589285 KRBA1A5PL33 1030 aa5.06□□□□□ -1.6
ZNF540-207ENST00000589285 FAM181BA6NEQ2 426 aa5.06□□□□□ -1.6
ZNF540-207ENST00000589285 PBX4Q9BYU1 374 aa5.06□□□□□ -1.6
ZNF540-207ENST00000589285 AMOTL2Q9Y2J4 779 aa5.06□□□□□ -1.6
ZNF540-207ENST00000589285 GADD45BO75293 160 aaPredicted RBP5.06□□□□□ -1.6
ZNF540-207ENST00000589285 DLGAP3O95886 979 aa5.06□□□□□ -1.6
ZNF540-207ENST00000589285 MEI1Q5TIA1 1274 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms