RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 CIAPIN1Q6FI81 312 aa25.17■■□□□ 1.62
DDX39A-207ENST00000588542 ZBTB40Q9NUA8 1239 aa25.17■■□□□ 1.62
DDX39A-207ENST00000588542 PDE8BO95263 885 aa25.16■■□□□ 1.62
DDX39A-207ENST00000588542 UBE4AQ14139 1066 aa25.16■■□□□ 1.62
DDX39A-207ENST00000588542 POLA2Q14181 598 aa25.16■■□□□ 1.62
DDX39A-207ENST00000588542 G3V3G9 751 aa25.15■■□□□ 1.62
DDX39A-207ENST00000588542 VEGFAP15692 232 aaPredicted RBP25.15■■□□□ 1.62
DDX39A-207ENST00000588542 DCAF8Q5TAQ9 597 aa25.15■■□□□ 1.62
DDX39A-207ENST00000588542 SSH3Q8TE77 659 aa25.15■■□□□ 1.62
DDX39A-207ENST00000588542 PSMD14O00487 310 aa25.14■■□□□ 1.62
DDX39A-207ENST00000588542 TNIP1Q15025 636 aa25.14■■□□□ 1.62
DDX39A-207ENST00000588542 CEP85Q6P2H3 762 aa25.14■■□□□ 1.62
DDX39A-207ENST00000588542 PODNQ7Z5L7 613 aa25.14■■□□□ 1.62
DDX39A-207ENST00000588542 COA1Q9GZY4 146 aa25.14■■□□□ 1.62
DDX39A-207ENST00000588542 IL15P40933 162 aaPredicted RBP25.13■■□□□ 1.61
DDX39A-207ENST00000588542 SCNN1DP51172 638 aa25.13■■□□□ 1.61
DDX39A-207ENST00000588542 FGFR2P21802 821 aa25.12■■□□□ 1.61
DDX39A-207ENST00000588542 ARAP2Q8WZ64 1704 aa25.12■■□□□ 1.61
DDX39A-207ENST00000588542 CD209Q9NNX6 404 aa25.11■■□□□ 1.61
DDX39A-207ENST00000588542 VIL1P09327 827 aaKnown RBP25.1■■□□□ 1.61
DDX39A-207ENST00000588542 GMPSP49915 693 aaPredicted RBP25.1■■□□□ 1.61
DDX39A-207ENST00000588542 CHMP4BQ9H444 224 aaKnown RBP25.1■■□□□ 1.61
DDX39A-207ENST00000588542 ADAMTSL1Q8N6G6 1762 aa25.09■■□□□ 1.61
DDX39A-207ENST00000588542 IQCA1LA6NCM1 817 aa25.09■■□□□ 1.61
DDX39A-207ENST00000588542 PUM3Q15397 648 aaKnown RBP25.09■■□□□ 1.61
DDX39A-207ENST00000588542 FAM84BQ96KN1 310 aaPredicted RBP25.09■■□□□ 1.61
DDX39A-207ENST00000588542 TAF1DQ9H5J8 278 aaPredicted RBP25.09■■□□□ 1.61
DDX39A-207ENST00000588542 CEP126Q9P2H0 1117 aa25.09■■□□□ 1.61
DDX39A-207ENST00000588542 HACL1Q9UJ83 578 aa25.09■■□□□ 1.61
DDX39A-207ENST00000588542 ZBTB12Q9Y330 459 aaPredicted RBP25.09■■□□□ 1.61
DDX39A-207ENST00000588542 MYH13Q9UKX3 1938 aa25.08■■□□□ 1.61
DDX39A-207ENST00000588542 IL1R1P14778 569 aa25.08■■□□□ 1.61
DDX39A-207ENST00000588542 EPS15P42566 896 aa25.08■■□□□ 1.61
DDX39A-207ENST00000588542 GYG1P46976 350 aa25.08■■□□□ 1.61
DDX39A-207ENST00000588542 ZNF804AQ7Z570 1209 aa25.08■■□□□ 1.61
DDX39A-207ENST00000588542 GPRC5DQ9NZD1 345 aa25.08■■□□□ 1.61
DDX39A-207ENST00000588542 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.08■■□□□ 1.61
DDX39A-207ENST00000588542 ZNF609O15014 1411 aa25.07■■□□□ 1.6
DDX39A-207ENST00000588542 USP17L3A6NCW0 530 aa25.07■■□□□ 1.6
DDX39A-207ENST00000588542 USP17L4A6NCW7 530 aa25.07■■□□□ 1.6
DDX39A-207ENST00000588542 USP17L1Q7RTZ2 530 aa25.07■■□□□ 1.6
DDX39A-207ENST00000588542 SIRT2Q8IXJ6 389 aa25.07■■□□□ 1.6
DDX39A-207ENST00000588542 TOMM70O94826 608 aa25.06■■□□□ 1.6
DDX39A-207ENST00000588542 EPHX2P34913 555 aa25.06■■□□□ 1.6
DDX39A-207ENST00000588542 TFCP2Q12800 502 aa25.06■■□□□ 1.6
DDX39A-207ENST00000588542 RSBN1LQ6PCB5 846 aaPredicted RBP25.06■■□□□ 1.6
DDX39A-207ENST00000588542 FBXO33Q7Z6M2 555 aa25.06■■□□□ 1.6
DDX39A-207ENST00000588542 LPIN2Q92539 896 aa25.06■■□□□ 1.6
DDX39A-207ENST00000588542 DPF2Q92785 391 aa25.06■■□□□ 1.6
DDX39A-207ENST00000588542 NOP58Q9Y2X3 529 aaKnown RBP25.06■■□□□ 1.6
DDX39A-207ENST00000588542 SASH1O94885 1247 aa25.05■■□□□ 1.6
DDX39A-207ENST00000588542 LMOD1P29536 600 aaPredicted RBP25.05■■□□□ 1.6
DDX39A-207ENST00000588542 HIBADHP31937 336 aaKnown RBP25.05■■□□□ 1.6
DDX39A-207ENST00000588542 G3BP1Q13283 466 aaKnown RBP eCLIP25.05■■□□□ 1.6
DDX39A-207ENST00000588542 ATP2B3Q16720 1220 aa25.05■■□□□ 1.6
DDX39A-207ENST00000588542 DACT2Q5SW24 774 aa25.05■■□□□ 1.6
DDX39A-207ENST00000588542 STRIP1Q5VSL9 837 aa25.05■■□□□ 1.6
DDX39A-207ENST00000588542 RPAP2Q8IXW5 612 aaPredicted RBP25.05■■□□□ 1.6
DDX39A-207ENST00000588542 C16orf71Q8IYS4 520 aaPredicted RBP25.05■■□□□ 1.6
DDX39A-207ENST00000588542 GMLQ99445 158 aa25.05■■□□□ 1.6
DDX39A-207ENST00000588542 SHTN1A0MZ66 631 aa25.04■■□□□ 1.6
DDX39A-207ENST00000588542 IFIT1P09914 478 aaKnown RBP25.04■■□□□ 1.6
DDX39A-207ENST00000588542 POTEIP0CG38 1075 aa25.04■■□□□ 1.6
DDX39A-207ENST00000588542 POTEJP0CG39 1038 aa25.04■■□□□ 1.6
DDX39A-207ENST00000588542 SLC5A1P13866 664 aa25.04■■□□□ 1.6
DDX39A-207ENST00000588542 RPS12P25398 132 aaKnown RBP25.04■■□□□ 1.6
DDX39A-207ENST00000588542 TDRD7Q8NHU6 1098 aaKnown RBP25.04■■□□□ 1.6
DDX39A-207ENST00000588542 CNOT7Q9UIV1 285 aaKnown RBP25.04■■□□□ 1.6
DDX39A-207ENST00000588542 SURF6O75683 361 aaKnown RBP25.03■■□□□ 1.6
DDX39A-207ENST00000588542 BCAMP50895 628 aa25.03■■□□□ 1.6
DDX39A-207ENST00000588542 GTF2IP78347 998 aa25.03■■□□□ 1.6
DDX39A-207ENST00000588542 TTLL5Q6EMB2 1281 aa25.03■■□□□ 1.6
DDX39A-207ENST00000588542 RBM46Q8TBY0 533 aaKnown RBP25.03■■□□□ 1.6
DDX39A-207ENST00000588542 MXD3Q9BW11 206 aa25.03■■□□□ 1.6
DDX39A-207ENST00000588542 AGBL3Q8NEM8 1001 aa25.02■■□□□ 1.6
DDX39A-207ENST00000588542 CRBNQ96SW2 442 aa25.02■■□□□ 1.6
DDX39A-207ENST00000588542 SUPT16HQ9Y5B9 1047 aaKnown RBP25.02■■□□□ 1.6
DDX39A-207ENST00000588542 CAVIN4Q5BKX8 364 aa25.01■■□□□ 1.59
DDX39A-207ENST00000588542 MICALL2Q8IY33 904 aa25.01■■□□□ 1.59
DDX39A-207ENST00000588542 FBXW7Q969H0 707 aa25.01■■□□□ 1.59
DDX39A-207ENST00000588542 ADARB2Q9NS39 739 aaKnown RBP25.01■■□□□ 1.59
DDX39A-207ENST00000588542 C1QTNF8P60827 252 aa25■■□□□ 1.59
DDX39A-207ENST00000588542 TIMM10P62072 90 aa25■■□□□ 1.59
DDX39A-207ENST00000588542 PNMA8AQ86V59 439 aaPredicted RBP25■■□□□ 1.59
DDX39A-207ENST00000588542 FAM205AQ6ZU69 1335 aa25■■□□□ 1.59
DDX39A-207ENST00000588542 A0A1B0GUL7 405 aa24.99■■□□□ 1.59
DDX39A-207ENST00000588542 ADORA1P30542 326 aa24.99■■□□□ 1.59
DDX39A-207ENST00000588542 EAPPQ56P03 285 aaPredicted RBP24.99■■□□□ 1.59
DDX39A-207ENST00000588542 VPS37DQ86XT2 251 aa24.99■■□□□ 1.59
DDX39A-207ENST00000588542 IQSEC3Q9UPP2 1182 aaPredicted RBP24.99■■□□□ 1.59
DDX39A-207ENST00000588542 AKAP2Q9Y2D5 859 aa24.99■■□□□ 1.59
DDX39A-207ENST00000588542 MYO3BQ8WXR4 1341 aa24.98■■□□□ 1.59
DDX39A-207ENST00000588542 OS9Q13438 667 aaPredicted RBP24.98■■□□□ 1.59
DDX39A-207ENST00000588542 USP50Q70EL3 339 aaPredicted RBP24.98■■□□□ 1.59
DDX39A-207ENST00000588542 CERS5Q8N5B7 392 aa24.98■■□□□ 1.59
DDX39A-207ENST00000588542 TRPM4Q8TD43 1214 aa24.98■■□□□ 1.59
DDX39A-207ENST00000588542 JAG2Q9Y219 1238 aa24.98■■□□□ 1.59
DDX39A-207ENST00000588542 EXOC6BQ9Y2D4 811 aa24.98■■□□□ 1.59
DDX39A-207ENST00000588542 POLR2AP24928 1970 aaKnown RBP24.97■■□□□ 1.59
DDX39A-207ENST00000588542 H7C1D1 291 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 334.8 ms