RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 HPS5Q9UPZ3 1129 aa18.27■□□□□ 0.52
CXXC1-208ENST00000587170 MMP14P50281 582 aa18.26■□□□□ 0.51
CXXC1-208ENST00000587170 DACT2Q5SW24 774 aa18.26■□□□□ 0.51
CXXC1-208ENST00000587170 CDC5LQ99459 802 aaKnown RBP18.26■□□□□ 0.51
CXXC1-208ENST00000587170 CFHR5Q9BXR6 569 aa18.26■□□□□ 0.51
CXXC1-208ENST00000587170 DDX58O95786 925 aaKnown RBP18.25■□□□□ 0.51
CXXC1-208ENST00000587170 TM4SF4P48230 202 aa18.25■□□□□ 0.51
CXXC1-208ENST00000587170 CALD1Q05682 793 aaKnown RBP18.25■□□□□ 0.51
CXXC1-208ENST00000587170 NBPF9Q3BBW0 867 aa18.25■□□□□ 0.51
CXXC1-208ENST00000587170 PRPF38BQ5VTL8 546 aaKnown RBP18.25■□□□□ 0.51
CXXC1-208ENST00000587170 MOB2Q70IA6 237 aa18.25■□□□□ 0.51
CXXC1-208ENST00000587170 BSDC1Q9NW68 430 aaPredicted RBP18.25■□□□□ 0.51
CXXC1-208ENST00000587170 WTIPA6NIX2 430 aaPredicted RBP18.24■□□□□ 0.51
CXXC1-208ENST00000587170 WNT10BO00744 389 aa18.24■□□□□ 0.51
CXXC1-208ENST00000587170 IGKV5-2P06315 115 aa18.24■□□□□ 0.51
CXXC1-208ENST00000587170 STRIP1Q5VSL9 837 aa18.24■□□□□ 0.51
CXXC1-208ENST00000587170 C8orf58Q8NAV2 365 aa18.24■□□□□ 0.51
CXXC1-208ENST00000587170 TTLL11Q8NHH1 800 aa18.24■□□□□ 0.51
CXXC1-208ENST00000587170 ZNF296Q8WUU4 475 aaPredicted RBP18.24■□□□□ 0.51
CXXC1-208ENST00000587170 CCDC85AQ96PX6 553 aaPredicted RBP18.24■□□□□ 0.51
CXXC1-208ENST00000587170 MINPP1Q9UNW1 487 aa18.24■□□□□ 0.51
CXXC1-208ENST00000587170 UBE2Q2LH0YL09 131 aa18.23■□□□□ 0.51
CXXC1-208ENST00000587170 CCT4P50991 539 aaKnown RBP18.23■□□□□ 0.51
CXXC1-208ENST00000587170 JARID2Q92833 1246 aaPredicted RBP18.23■□□□□ 0.51
CXXC1-208ENST00000587170 CHMP4AQ9BY43 222 aa18.23■□□□□ 0.51
CXXC1-208ENST00000587170 MAP3K2Q9Y2U5 619 aa18.23■□□□□ 0.51
CXXC1-208ENST00000587170 KIAA0100Q14667 2235 aaKnown RBP18.22■□□□□ 0.51
CXXC1-208ENST00000587170 CCDC30Q5VVM6 783 aa18.22■□□□□ 0.51
CXXC1-208ENST00000587170 ZBED3Q96IU2 234 aaPredicted RBP18.22■□□□□ 0.51
CXXC1-208ENST00000587170 COA1Q9GZY4 146 aa18.22■□□□□ 0.51
CXXC1-208ENST00000587170 GREM2Q9H772 168 aa18.22■□□□□ 0.51
CXXC1-208ENST00000587170 SCAF8Q9UPN6 1271 aaKnown RBP18.22■□□□□ 0.51
CXXC1-208ENST00000587170 SSC5DA1L4H1 1573 aa18.21■□□□□ 0.51
CXXC1-208ENST00000587170 ELL2O00472 640 aaPredicted RBP18.21■□□□□ 0.51
CXXC1-208ENST00000587170 KSR2Q6VAB6 950 aa18.21■□□□□ 0.51
CXXC1-208ENST00000587170 OGFOD1Q8N543 542 aa18.21■□□□□ 0.51
CXXC1-208ENST00000587170 GPR25O00155 361 aa18.2■□□□□ 0.5
CXXC1-208ENST00000587170 APAF1O14727 1248 aa18.2■□□□□ 0.5
CXXC1-208ENST00000587170 TBC1D8O95759 1140 aa18.2■□□□□ 0.5
CXXC1-208ENST00000587170 PRAMEF18Q5VWM3 479 aa18.2■□□□□ 0.5
CXXC1-208ENST00000587170 TXNRD3Q86VQ6 643 aa18.2■□□□□ 0.5
CXXC1-208ENST00000587170 APOBEC3FQ8IUX4 373 aaKnown RBP18.2■□□□□ 0.5
CXXC1-208ENST00000587170 MXD3Q9BW11 206 aa18.2■□□□□ 0.5
CXXC1-208ENST00000587170 PI4KAP2A4QPH2 592 aa18.19■□□□□ 0.5
CXXC1-208ENST00000587170 NF2P35240 595 aa18.19■□□□□ 0.5
CXXC1-208ENST00000587170 SREBF2Q12772 1141 aa18.19■□□□□ 0.5
CXXC1-208ENST00000587170 DDX10Q13206 875 aaKnown RBP18.19■□□□□ 0.5
CXXC1-208ENST00000587170 LDLRAD1Q5T700 205 aa18.19■□□□□ 0.5
CXXC1-208ENST00000587170 FBXO46Q6PJ61 603 aaPredicted RBP18.19■□□□□ 0.5
CXXC1-208ENST00000587170 PI4KAP1Q8N8J0 262 aa18.19■□□□□ 0.5
CXXC1-208ENST00000587170 HDAC9Q9UKV0 1011 aa18.19■□□□□ 0.5
CXXC1-208ENST00000587170 LEMD3Q9Y2U8 911 aa18.19■□□□□ 0.5
CXXC1-208ENST00000587170 NEURL1BA8MQ27 555 aa18.18■□□□□ 0.5
CXXC1-208ENST00000587170 SASH1O94885 1247 aa18.18■□□□□ 0.5
CXXC1-208ENST00000587170 PLA2G12BQ9BX93 195 aa18.18■□□□□ 0.5
CXXC1-208ENST00000587170 PRKRIP1Q9H875 184 aaPredicted RBP18.18■□□□□ 0.5
CXXC1-208ENST00000587170 PTPN12Q05209 780 aaKnown RBP18.17■□□□□ 0.5
CXXC1-208ENST00000587170 TTLL12Q14166 644 aaPredicted RBP18.17■□□□□ 0.5
CXXC1-208ENST00000587170 TSPYL6Q8N831 410 aa18.17■□□□□ 0.5
CXXC1-208ENST00000587170 ZNF804BA4D1E1 1349 aa18.17■□□□□ 0.5
CXXC1-208ENST00000587170 IRS2Q9Y4H2 1338 aa18.17■□□□□ 0.5
CXXC1-208ENST00000587170 H7C1W4 665 aa18.16■□□□□ 0.5
CXXC1-208ENST00000587170 KLRK1P26718 216 aa18.16■□□□□ 0.5
CXXC1-208ENST00000587170 NEXNQ0ZGT2 675 aa18.16■□□□□ 0.5
CXXC1-208ENST00000587170 MAP3K11Q16584 847 aa18.16■□□□□ 0.5
CXXC1-208ENST00000587170 CWF19L2Q2TBE0 894 aaKnown RBP18.16■□□□□ 0.5
CXXC1-208ENST00000587170 SPRYD7Q5W111 196 aa18.16■□□□□ 0.5
CXXC1-208ENST00000587170 ARMC9Q7Z3E5 817 aa18.16■□□□□ 0.5
CXXC1-208ENST00000587170 FKTNO75072 461 aa18.15■□□□□ 0.5
CXXC1-208ENST00000587170 CASP7P55210 303 aa18.15■□□□□ 0.5
CXXC1-208ENST00000587170 TTLL5Q6EMB2 1281 aa18.15■□□□□ 0.5
CXXC1-208ENST00000587170 UBE3BQ7Z3V4 1068 aa18.15■□□□□ 0.5
CXXC1-208ENST00000587170 MTMR14Q8NCE2 650 aa18.15■□□□□ 0.5
CXXC1-208ENST00000587170 ANKRD2Q9GZV1 360 aa18.15■□□□□ 0.5
CXXC1-208ENST00000587170 R3HDMLQ9H3Y0 253 aa18.15■□□□□ 0.5
CXXC1-208ENST00000587170 ALDH1A1P00352 501 aa18.14■□□□□ 0.49
CXXC1-208ENST00000587170 IGHMBP2P38935 993 aaKnown RBP18.14■□□□□ 0.49
CXXC1-208ENST00000587170 KIAA0825Q8IV33 1275 aa18.14■□□□□ 0.49
CXXC1-208ENST00000587170 MYH13Q9UKX3 1938 aa18.13■□□□□ 0.49
CXXC1-208ENST00000587170 CEP290O15078 2479 aa18.13■□□□□ 0.49
CXXC1-208ENST00000587170 CSF1RP07333 972 aa18.13■□□□□ 0.49
CXXC1-208ENST00000587170 ZBTB48P10074 688 aaPredicted RBP18.13■□□□□ 0.49
CXXC1-208ENST00000587170 ITGA6P23229 1130 aa18.13■□□□□ 0.49
CXXC1-208ENST00000587170 C15orf52Q6ZUT6 534 aaKnown RBP18.13■□□□□ 0.49
CXXC1-208ENST00000587170 FBXW7Q969H0 707 aa18.13■□□□□ 0.49
CXXC1-208ENST00000587170 STK31Q9BXU1 1019 aa18.13■□□□□ 0.49
CXXC1-208ENST00000587170 PPP2R3BQ9Y5P8 575 aa18.13■□□□□ 0.49
CXXC1-208ENST00000587170 UNCXA6NJT0 531 aa18.12■□□□□ 0.49
CXXC1-208ENST00000587170 INHBEP58166 350 aa18.12■□□□□ 0.49
CXXC1-208ENST00000587170 MKRN3Q13064 507 aaKnown RBP18.12■□□□□ 0.49
CXXC1-208ENST00000587170 GCKRQ14397 625 aa18.12■□□□□ 0.49
CXXC1-208ENST00000587170 MANSC4A6NHS7 340 aaPredicted RBP18.11■□□□□ 0.49
CXXC1-208ENST00000587170 GTF2IP78347 998 aa18.11■□□□□ 0.49
CXXC1-208ENST00000587170 CCDC27Q2M243 656 aa18.11■□□□□ 0.49
CXXC1-208ENST00000587170 G2E3Q7L622 706 aa18.11■□□□□ 0.49
CXXC1-208ENST00000587170 CERS5Q8N5B7 392 aa18.11■□□□□ 0.49
CXXC1-208ENST00000587170 DEFB129Q9H1M3 183 aa18.11■□□□□ 0.49
CXXC1-208ENST00000587170 CD209Q9NNX6 404 aa18.11■□□□□ 0.49
CXXC1-208ENST00000587170 ANGEL1Q9UNK9 670 aaKnown RBP18.11■□□□□ 0.49
CXXC1-208ENST00000587170 CHRNDQ07001 517 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms