RNA–Protein interactions for RNA: ENST00000585843.1

DNMT1-204, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 911 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-204ENST00000585843 SCNN1DP51172 638 aa17.4■□□□□ 0.38
DNMT1-204ENST00000585843 PDE3AQ14432 1141 aa17.4■□□□□ 0.38
DNMT1-204ENST00000585843 MVPQ14764 893 aaKnown RBP17.4■□□□□ 0.38
DNMT1-204ENST00000585843 SIL1Q9H173 461 aa17.4■□□□□ 0.38
DNMT1-204ENST00000585843 COPRSQ9NQ92 184 aa17.4■□□□□ 0.38
DNMT1-204ENST00000585843 VIL1P09327 827 aaKnown RBP17.39■□□□□ 0.37
DNMT1-204ENST00000585843 ATG9AQ7Z3C6 839 aa17.39■□□□□ 0.37
DNMT1-204ENST00000585843 ZNF804AQ7Z570 1209 aa17.39■□□□□ 0.37
DNMT1-204ENST00000585843 GPRC5DQ9NZD1 345 aa17.39■□□□□ 0.37
DNMT1-204ENST00000585843 DDX19BQ9UMR2 479 aa17.39■□□□□ 0.37
DNMT1-204ENST00000585843 PA2G4Q9UQ80 394 aaKnown RBP17.39■□□□□ 0.37
DNMT1-204ENST00000585843 COG6Q9Y2V7 657 aa17.39■□□□□ 0.37
DNMT1-204ENST00000585843 SCN4AP35499 1836 aa17.38■□□□□ 0.37
DNMT1-204ENST00000585843 USP17L3A6NCW0 530 aa17.38■□□□□ 0.37
DNMT1-204ENST00000585843 USP17L4A6NCW7 530 aa17.38■□□□□ 0.37
DNMT1-204ENST00000585843 IL15P40933 162 aaPredicted RBP17.38■□□□□ 0.37
DNMT1-204ENST00000585843 EPS15P42566 896 aa17.38■□□□□ 0.37
DNMT1-204ENST00000585843 USP17L1Q7RTZ2 530 aa17.38■□□□□ 0.37
DNMT1-204ENST00000585843 PNMA8AQ86V59 439 aaPredicted RBP17.38■□□□□ 0.37
DNMT1-204ENST00000585843 VGLL2Q8N8G2 317 aa17.38■□□□□ 0.37
DNMT1-204ENST00000585843 CHMP4BQ9H444 224 aaKnown RBP17.38■□□□□ 0.37
DNMT1-204ENST00000585843 C1orf115Q9H7X2 142 aa17.38■□□□□ 0.37
DNMT1-204ENST00000585843 ZBTB12Q9Y330 459 aaPredicted RBP17.38■□□□□ 0.37
DNMT1-204ENST00000585843 IRS2Q9Y4H2 1338 aa17.38■□□□□ 0.37
DNMT1-204ENST00000585843 PNMA6EA0A0J9YXQ4 647 aa17.37■□□□□ 0.37
DNMT1-204ENST00000585843 RPS12P25398 132 aaKnown RBP17.37■□□□□ 0.37
DNMT1-204ENST00000585843 ATP8B2P98198 1209 aa17.37■□□□□ 0.37
DNMT1-204ENST00000585843 FSTL1Q12841 308 aa17.37■□□□□ 0.37
DNMT1-204ENST00000585843 PUM3Q15397 648 aaKnown RBP17.37■□□□□ 0.37
DNMT1-204ENST00000585843 EAPPQ56P03 285 aaPredicted RBP17.37■□□□□ 0.37
DNMT1-204ENST00000585843 SMC1BQ8NDV3 1235 aa17.37■□□□□ 0.37
DNMT1-204ENST00000585843 DPF2Q92785 391 aa17.37■□□□□ 0.37
DNMT1-204ENST00000585843 CD209Q9NNX6 404 aa17.37■□□□□ 0.37
DNMT1-204ENST00000585843 CEP126Q9P2H0 1117 aa17.37■□□□□ 0.37
DNMT1-204ENST00000585843 A0A1B0GUL6 1792 aa17.36■□□□□ 0.37
DNMT1-204ENST00000585843 H7C1D1 291 aa17.36■□□□□ 0.37
DNMT1-204ENST00000585843 C20orf194Q5TEA3 1177 aa17.36■□□□□ 0.37
DNMT1-204ENST00000585843 RSBN1LQ6PCB5 846 aaPredicted RBP17.36■□□□□ 0.37
DNMT1-204ENST00000585843 FBXW7Q969H0 707 aa17.36■□□□□ 0.37
DNMT1-204ENST00000585843 ADARB2Q9NS39 739 aaKnown RBP17.36■□□□□ 0.37
DNMT1-204ENST00000585843 CNOT7Q9UIV1 285 aaKnown RBP17.36■□□□□ 0.37
DNMT1-204ENST00000585843 IFIT1P09914 478 aaKnown RBP17.35■□□□□ 0.37
DNMT1-204ENST00000585843 IL1R1P14778 569 aa17.35■□□□□ 0.37
DNMT1-204ENST00000585843 HIBADHP31937 336 aaKnown RBP17.35■□□□□ 0.37
DNMT1-204ENST00000585843 STRIP1Q5VSL9 837 aa17.35■□□□□ 0.37
DNMT1-204ENST00000585843 TTLL5Q6EMB2 1281 aa17.35■□□□□ 0.37
DNMT1-204ENST00000585843 USP50Q70EL3 339 aaPredicted RBP17.35■□□□□ 0.37
DNMT1-204ENST00000585843 LDHDQ86WU2 507 aa17.35■□□□□ 0.37
DNMT1-204ENST00000585843 AGBL3Q8NEM8 1001 aa17.35■□□□□ 0.37
DNMT1-204ENST00000585843 CLEC11AQ9Y240 323 aa17.35■□□□□ 0.37
DNMT1-204ENST00000585843 FGFR2P21802 821 aa17.34■□□□□ 0.37
DNMT1-204ENST00000585843 GYG1P46976 350 aa17.34■□□□□ 0.37
DNMT1-204ENST00000585843 G3BP1Q13283 466 aaKnown RBP eCLIP17.34■□□□□ 0.37
DNMT1-204ENST00000585843 POLA2Q14181 598 aa17.34■□□□□ 0.37
DNMT1-204ENST00000585843 CAVIN4Q5BKX8 364 aa17.34■□□□□ 0.37
DNMT1-204ENST00000585843 DACT2Q5SW24 774 aa17.34■□□□□ 0.37
DNMT1-204ENST00000585843 CHADLQ6NUI6 762 aa17.34■□□□□ 0.37
DNMT1-204ENST00000585843 VPS37DQ86XT2 251 aa17.34■□□□□ 0.37
DNMT1-204ENST00000585843 MICALL2Q8IY33 904 aa17.34■□□□□ 0.37
DNMT1-204ENST00000585843 SSH3Q8TE77 659 aa17.34■□□□□ 0.37
DNMT1-204ENST00000585843 LPIN2Q92539 896 aa17.34■□□□□ 0.37
DNMT1-204ENST00000585843 FAM84BQ96KN1 310 aaPredicted RBP17.34■□□□□ 0.37
DNMT1-204ENST00000585843 ZBTB40Q9NUA8 1239 aa17.34■□□□□ 0.37
DNMT1-204ENST00000585843 SCN9AQ15858 1988 aa17.33■□□□□ 0.37
DNMT1-204ENST00000585843 POTEIP0CG38 1075 aa17.33■□□□□ 0.36
DNMT1-204ENST00000585843 POTEJP0CG39 1038 aa17.33■□□□□ 0.36
DNMT1-204ENST00000585843 SLC5A1P13866 664 aa17.33■□□□□ 0.36
DNMT1-204ENST00000585843 GTF2IP78347 998 aa17.33■□□□□ 0.36
DNMT1-204ENST00000585843 CEP85Q6P2H3 762 aa17.33■□□□□ 0.36
DNMT1-204ENST00000585843 FBXO33Q7Z6M2 555 aa17.33■□□□□ 0.36
DNMT1-204ENST00000585843 MYO3BQ8WXR4 1341 aa17.32■□□□□ 0.36
DNMT1-204ENST00000585843 RRP1P56182 461 aaKnown RBP17.32■□□□□ 0.36
DNMT1-204ENST00000585843 ATP2B3Q16720 1220 aa17.32■□□□□ 0.36
DNMT1-204ENST00000585843 GMLQ99445 158 aa17.32■□□□□ 0.36
DNMT1-204ENST00000585843 ZNF609O15014 1411 aa17.31■□□□□ 0.36
DNMT1-204ENST00000585843 SHTN1A0MZ66 631 aa17.31■□□□□ 0.36
DNMT1-204ENST00000585843 SASH1O94885 1247 aa17.31■□□□□ 0.36
DNMT1-204ENST00000585843 TFCP2Q12800 502 aa17.31■□□□□ 0.36
DNMT1-204ENST00000585843 TDRD7Q8NHU6 1098 aaKnown RBP17.31■□□□□ 0.36
DNMT1-204ENST00000585843 MXD3Q9BW11 206 aa17.31■□□□□ 0.36
DNMT1-204ENST00000585843 AKAP2Q9Y2D5 859 aa17.31■□□□□ 0.36
DNMT1-204ENST00000585843 FRAT2O75474 233 aaPredicted RBP17.3■□□□□ 0.36
DNMT1-204ENST00000585843 SURF6O75683 361 aaKnown RBP17.3■□□□□ 0.36
DNMT1-204ENST00000585843 USP17L8P0C7I0 530 aa17.3■□□□□ 0.36
DNMT1-204ENST00000585843 BCAMP50895 628 aa17.3■□□□□ 0.36
DNMT1-204ENST00000585843 OS9Q13438 667 aaPredicted RBP17.3■□□□□ 0.36
DNMT1-204ENST00000585843 ZNF280AP59817 542 aaPredicted RBP17.29■□□□□ 0.36
DNMT1-204ENST00000585843 TBC1D10BQ4KMP7 808 aaPredicted RBP17.29■□□□□ 0.36
DNMT1-204ENST00000585843 RBM26Q5T8P6 1007 aaKnown RBP17.29■□□□□ 0.36
DNMT1-204ENST00000585843 SAMD7Q7Z3H4 446 aa17.29■□□□□ 0.36
DNMT1-204ENST00000585843 RPAP2Q8IXW5 612 aaPredicted RBP17.29■□□□□ 0.36
DNMT1-204ENST00000585843 OGFOD1Q8N543 542 aa17.29■□□□□ 0.36
DNMT1-204ENST00000585843 TRPM4Q8TD43 1214 aa17.29■□□□□ 0.36
DNMT1-204ENST00000585843 NOP58Q9Y2X3 529 aaKnown RBP17.29■□□□□ 0.36
DNMT1-204ENST00000585843 PSME4Q14997 1843 aa17.28■□□□□ 0.36
DNMT1-204ENST00000585843 FAM205AQ6ZU69 1335 aa17.28■□□□□ 0.36
DNMT1-204ENST00000585843 HSPA6P17066 643 aa17.28■□□□□ 0.36
DNMT1-204ENST00000585843 MMP14P50281 582 aa17.28■□□□□ 0.36
DNMT1-204ENST00000585843 HIRAP54198 1017 aaPredicted RBP17.28■□□□□ 0.36
DNMT1-204ENST00000585843 FKBP1AP62942 108 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms