RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 LDHDQ86WU2 507 aa20.32■□□□□ 0.84
ERBB2-222ENST00000584908 FTSJ3Q8IY81 847 aaKnown RBP20.32■□□□□ 0.84
ERBB2-222ENST00000584908 SNAP23O00161 211 aa20.31■□□□□ 0.84
ERBB2-222ENST00000584908 POTEIP0CG38 1075 aa20.31■□□□□ 0.84
ERBB2-222ENST00000584908 POTEJP0CG39 1038 aa20.31■□□□□ 0.84
ERBB2-222ENST00000584908 LRRC24Q50LG9 513 aa20.31■□□□□ 0.84
ERBB2-222ENST00000584908 VGLL2Q8N8G2 317 aa20.31■□□□□ 0.84
ERBB2-222ENST00000584908 KLHDC4Q8TBB5 520 aa20.31■□□□□ 0.84
ERBB2-222ENST00000584908 CEP350Q5VT06 3117 aa20.31■□□□□ 0.84
ERBB2-222ENST00000584908 GNAI2P04899 355 aa20.3■□□□□ 0.84
ERBB2-222ENST00000584908 MS4A1P11836 297 aa20.3■□□□□ 0.84
ERBB2-222ENST00000584908 HSPA6P17066 643 aa20.3■□□□□ 0.84
ERBB2-222ENST00000584908 CHADLQ6NUI6 762 aa20.3■□□□□ 0.84
ERBB2-222ENST00000584908 USP50Q70EL3 339 aaPredicted RBP20.3■□□□□ 0.84
ERBB2-222ENST00000584908 ADARB2Q9NS39 739 aaKnown RBP20.3■□□□□ 0.84
ERBB2-222ENST00000584908 EYA2O00167 538 aa20.29■□□□□ 0.84
ERBB2-222ENST00000584908 COPRSQ9NQ92 184 aa20.29■□□□□ 0.84
ERBB2-222ENST00000584908 ZBTB12Q9Y330 459 aaPredicted RBP20.29■□□□□ 0.84
ERBB2-222ENST00000584908 USP17L3A6NCW0 530 aa20.28■□□□□ 0.84
ERBB2-222ENST00000584908 USP17L4A6NCW7 530 aa20.28■□□□□ 0.84
ERBB2-222ENST00000584908 ZBTB7BO15156 539 aaPredicted RBP20.28■□□□□ 0.84
ERBB2-222ENST00000584908 CIAO1O76071 339 aa20.28■□□□□ 0.84
ERBB2-222ENST00000584908 PDE8BO95263 885 aa20.28■□□□□ 0.84
ERBB2-222ENST00000584908 USP17L1Q7RTZ2 530 aa20.28■□□□□ 0.84
ERBB2-222ENST00000584908 ATG9AQ7Z3C6 839 aa20.28■□□□□ 0.84
ERBB2-222ENST00000584908 AGBL3Q8NEM8 1001 aa20.28■□□□□ 0.84
ERBB2-222ENST00000584908 GMLQ99445 158 aa20.28■□□□□ 0.84
ERBB2-222ENST00000584908 CD209Q9NNX6 404 aa20.28■□□□□ 0.84
ERBB2-222ENST00000584908 CNOT7Q9UIV1 285 aaKnown RBP20.28■□□□□ 0.84
ERBB2-222ENST00000584908 PLIN1O60240 522 aa20.27■□□□□ 0.84
ERBB2-222ENST00000584908 IL1R1P14778 569 aa20.27■□□□□ 0.84
ERBB2-222ENST00000584908 METTL24Q5JXM2 366 aa20.27■□□□□ 0.84
ERBB2-222ENST00000584908 STRIP1Q5VSL9 837 aa20.27■□□□□ 0.84
ERBB2-222ENST00000584908 RSBN1LQ6PCB5 846 aaPredicted RBP20.27■□□□□ 0.84
ERBB2-222ENST00000584908 EAPPQ56P03 285 aaPredicted RBP20.27■□□□□ 0.83
ERBB2-222ENST00000584908 DACT2Q5SW24 774 aa20.27■□□□□ 0.83
ERBB2-222ENST00000584908 ZNF804AQ7Z570 1209 aa20.27■□□□□ 0.83
ERBB2-222ENST00000584908 ITPRIPQ8IWB1 547 aa20.27■□□□□ 0.83
ERBB2-222ENST00000584908 MICALL2Q8IY33 904 aa20.27■□□□□ 0.83
ERBB2-222ENST00000584908 SRGAP3O43295 1099 aa20.26■□□□□ 0.83
ERBB2-222ENST00000584908 PANK1Q8TE04 598 aa20.26■□□□□ 0.83
ERBB2-222ENST00000584908 PGAP2Q9UHJ9 254 aa20.26■□□□□ 0.83
ERBB2-222ENST00000584908 MYO3BQ8WXR4 1341 aa20.25■□□□□ 0.83
ERBB2-222ENST00000584908 H7C1D1 291 aa20.25■□□□□ 0.83
ERBB2-222ENST00000584908 FGFR2P21802 821 aa20.25■□□□□ 0.83
ERBB2-222ENST00000584908 ZNF280AP59817 542 aaPredicted RBP20.25■□□□□ 0.83
ERBB2-222ENST00000584908 SHTN1A0MZ66 631 aa20.24■□□□□ 0.83
ERBB2-222ENST00000584908 ITGBL1O95965 494 aaPredicted RBP20.24■□□□□ 0.83
ERBB2-222ENST00000584908 IL15P40933 162 aaPredicted RBP20.24■□□□□ 0.83
ERBB2-222ENST00000584908 HIRAP54198 1017 aaPredicted RBP20.24■□□□□ 0.83
ERBB2-222ENST00000584908 PUM3Q15397 648 aaKnown RBP20.24■□□□□ 0.83
ERBB2-222ENST00000584908 TTLL5Q6EMB2 1281 aa20.24■□□□□ 0.83
ERBB2-222ENST00000584908 ZC3H15Q8WU90 426 aaKnown RBP20.24■□□□□ 0.83
ERBB2-222ENST00000584908 FAM84BQ96KN1 310 aaPredicted RBP20.24■□□□□ 0.83
ERBB2-222ENST00000584908 PA2G4Q9UQ80 394 aaKnown RBP20.24■□□□□ 0.83
ERBB2-222ENST00000584908 PASKQ96RG2 1323 aa20.23■□□□□ 0.83
ERBB2-222ENST00000584908 ARAP2Q8WZ64 1704 aa20.23■□□□□ 0.83
ERBB2-222ENST00000584908 MMP14P50281 582 aa20.23■□□□□ 0.83
ERBB2-222ENST00000584908 APLP1P51693 650 aa20.23■□□□□ 0.83
ERBB2-222ENST00000584908 FBXO33Q7Z6M2 555 aa20.23■□□□□ 0.83
ERBB2-222ENST00000584908 TRPM4Q8TD43 1214 aa20.23■□□□□ 0.83
ERBB2-222ENST00000584908 SIL1Q9H173 461 aa20.23■□□□□ 0.83
ERBB2-222ENST00000584908 PNMA6EA0A0J9YXQ4 647 aa20.22■□□□□ 0.83
ERBB2-222ENST00000584908 HIBADHP31937 336 aaKnown RBP20.22■□□□□ 0.83
ERBB2-222ENST00000584908 FKBP1AP62942 108 aaKnown RBP20.22■□□□□ 0.83
ERBB2-222ENST00000584908 POLA2Q14181 598 aa20.22■□□□□ 0.83
ERBB2-222ENST00000584908 PDE3AQ14432 1141 aa20.22■□□□□ 0.83
ERBB2-222ENST00000584908 MVPQ14764 893 aaKnown RBP20.22■□□□□ 0.83
ERBB2-222ENST00000584908 TDRD7Q8NHU6 1098 aaKnown RBP20.22■□□□□ 0.83
ERBB2-222ENST00000584908 CLEC11AQ9Y240 323 aa20.22■□□□□ 0.83
ERBB2-222ENST00000584908 SASH1O94885 1247 aa20.21■□□□□ 0.83
ERBB2-222ENST00000584908 USP17L8P0C7I0 530 aa20.21■□□□□ 0.83
ERBB2-222ENST00000584908 GYG1P46976 350 aa20.21■□□□□ 0.83
ERBB2-222ENST00000584908 GTF2IP78347 998 aa20.21■□□□□ 0.83
ERBB2-222ENST00000584908 ATP8B2P98198 1209 aa20.21■□□□□ 0.83
ERBB2-222ENST00000584908 CNTROBQ8N137 903 aa20.21■□□□□ 0.83
ERBB2-222ENST00000584908 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.21■□□□□ 0.83
ERBB2-222ENST00000584908 SSH3Q8TE77 659 aa20.21■□□□□ 0.83
ERBB2-222ENST00000584908 LPIN2Q92539 896 aa20.21■□□□□ 0.83
ERBB2-222ENST00000584908 YTHDC1Q96MU7 727 aaKnown RBP20.21■□□□□ 0.83
ERBB2-222ENST00000584908 CEP126Q9P2H0 1117 aa20.21■□□□□ 0.83
ERBB2-222ENST00000584908 FAM205AQ6ZU69 1335 aa20.2■□□□□ 0.82
ERBB2-222ENST00000584908 POLR2AP24928 1970 aaKnown RBP20.2■□□□□ 0.82
ERBB2-222ENST00000584908 EGFRP00533 1210 aa20.2■□□□□ 0.82
ERBB2-222ENST00000584908 IFIT1P09914 478 aaKnown RBP20.2■□□□□ 0.82
ERBB2-222ENST00000584908 MAP1SQ66K74 1059 aaPredicted RBP20.2■□□□□ 0.82
ERBB2-222ENST00000584908 SAMD7Q7Z3H4 446 aa20.2■□□□□ 0.82
ERBB2-222ENST00000584908 DDX19BQ9UMR2 479 aa20.2■□□□□ 0.82
ERBB2-222ENST00000584908 MYH13Q9UKX3 1938 aa20.2■□□□□ 0.82
ERBB2-222ENST00000584908 TRPM7Q96QT4 1865 aa20.19■□□□□ 0.82
ERBB2-222ENST00000584908 CAVIN4Q5BKX8 364 aa20.19■□□□□ 0.82
ERBB2-222ENST00000584908 MXD3Q9BW11 206 aa20.19■□□□□ 0.82
ERBB2-222ENST00000584908 ZBTB22O15209 634 aa20.18■□□□□ 0.82
ERBB2-222ENST00000584908 SLC5A1P13866 664 aa20.18■□□□□ 0.82
ERBB2-222ENST00000584908 KIF4BQ2VIQ3 1234 aa20.18■□□□□ 0.82
ERBB2-222ENST00000584908 TBC1D10BQ4KMP7 808 aaPredicted RBP20.18■□□□□ 0.82
ERBB2-222ENST00000584908 CERS5Q8N5B7 392 aa20.18■□□□□ 0.82
ERBB2-222ENST00000584908 C1orf115Q9H7X2 142 aa20.18■□□□□ 0.82
ERBB2-222ENST00000584908 ATP2B3Q16720 1220 aa20.17■□□□□ 0.82
ERBB2-222ENST00000584908 FBXW7Q969H0 707 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 143.6 ms