RNA–Protein interactions for RNA: ENST00000584558.5

ITGB4-212, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best)

Gene ITGB4, Length 2,895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-212ENST00000584558 USP21Q9UK80 565 aa14.92□□□□□ -0.02
ITGB4-212ENST00000584558 NWD2Q9ULI1 1742 aa14.92□□□□□ -0.02
ITGB4-212ENST00000584558 A0A0G2JS52 829 aa14.91□□□□□ -0.02
ITGB4-212ENST00000584558 FAM98CQ17RN3 349 aaKnown RBP14.91□□□□□ -0.02
ITGB4-212ENST00000584558 SLFNL1Q499Z3 407 aa14.91□□□□□ -0.02
ITGB4-212ENST00000584558 TTLL7Q6ZT98 887 aa14.91□□□□□ -0.02
ITGB4-212ENST00000584558 ATG3Q9NT62 314 aa14.91□□□□□ -0.02
ITGB4-212ENST00000584558 DOT1LQ8TEK3 1739 aa14.91□□□□□ -0.02
ITGB4-212ENST00000584558 LIG1P18858 919 aa14.91□□□□□ -0.02
ITGB4-212ENST00000584558 RABL6Q3YEC7 729 aaPredicted RBP14.91□□□□□ -0.02
ITGB4-212ENST00000584558 RASSF4Q9H2L5 321 aa14.91□□□□□ -0.02
ITGB4-212ENST00000584558 AK2P54819 239 aa14.91□□□□□ -0.02
ITGB4-212ENST00000584558 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.91□□□□□ -0.02
ITGB4-212ENST00000584558 TEX2Q8IWB9 1127 aa14.91□□□□□ -0.02
ITGB4-212ENST00000584558 C10orf67Q8IYJ2 551 aa14.91□□□□□ -0.02
ITGB4-212ENST00000584558 ASAP1Q9ULH1 1129 aa14.91□□□□□ -0.02
ITGB4-212ENST00000584558 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.91□□□□□ -0.02
ITGB4-212ENST00000584558 SASH1O94885 1247 aa14.9□□□□□ -0.02
ITGB4-212ENST00000584558 TEX35Q5T0J7 233 aa14.9□□□□□ -0.02
ITGB4-212ENST00000584558 SYT10Q6XYQ8 523 aa14.9□□□□□ -0.02
ITGB4-212ENST00000584558 KRBA2Q6ZNG9 492 aa14.9□□□□□ -0.02
ITGB4-212ENST00000584558 ERC1Q8IUD2 1116 aa14.9□□□□□ -0.02
ITGB4-212ENST00000584558 FHOD1Q9Y613 1164 aa14.9□□□□□ -0.02
ITGB4-212ENST00000584558 SKILP12757 684 aa14.9□□□□□ -0.02
ITGB4-212ENST00000584558 RFX5P48382 616 aaPredicted RBP14.9□□□□□ -0.02
ITGB4-212ENST00000584558 LRRC8AQ8IWT6 810 aa14.9□□□□□ -0.02
ITGB4-212ENST00000584558 SPATA31A1Q5TZJ5 1347 aa14.89□□□□□ -0.03
ITGB4-212ENST00000584558 TTC41PQ6P2S7 1318 aa14.89□□□□□ -0.03
ITGB4-212ENST00000584558 BCL9LQ86UU0 1499 aa14.89□□□□□ -0.03
ITGB4-212ENST00000584558 ATP5J2-PTCD1G3V325 749 aa14.89□□□□□ -0.03
ITGB4-212ENST00000584558 GJB2P29033 226 aa14.89□□□□□ -0.03
ITGB4-212ENST00000584558 CLCN6P51797 869 aa14.89□□□□□ -0.03
ITGB4-212ENST00000584558 NYAP1Q6ZVC0 841 aa14.89□□□□□ -0.03
ITGB4-212ENST00000584558 DNAJC25Q9H1X3 360 aa14.89□□□□□ -0.03
ITGB4-212ENST00000584558 IL25Q9H293 177 aa14.89□□□□□ -0.03
ITGB4-212ENST00000584558 PNMA6AP0CW24 399 aaPredicted RBP14.89□□□□□ -0.03
ITGB4-212ENST00000584558 ZNF165P49910 485 aa14.89□□□□□ -0.03
ITGB4-212ENST00000584558 CCDC83Q8IWF9 413 aa14.89□□□□□ -0.03
ITGB4-212ENST00000584558 EFCC1Q9HA90 598 aa14.89□□□□□ -0.03
ITGB4-212ENST00000584558 DACT1Q9NYF0 836 aa14.89□□□□□ -0.03
ITGB4-212ENST00000584558 SLIT2O94813 1529 aa14.89□□□□□ -0.03
ITGB4-212ENST00000584558 H7C1W4 665 aa14.88□□□□□ -0.03
ITGB4-212ENST00000584558 MTMR6Q9Y217 621 aa14.88□□□□□ -0.03
ITGB4-212ENST00000584558 TRIM66O15016 1216 aa14.88□□□□□ -0.03
ITGB4-212ENST00000584558 CPA1P15085 419 aa14.88□□□□□ -0.03
ITGB4-212ENST00000584558 PLA2G4AP47712 749 aa14.88□□□□□ -0.03
ITGB4-212ENST00000584558 FAM173BQ6P4H8 233 aa14.88□□□□□ -0.03
ITGB4-212ENST00000584558 FILIP1Q7Z7B0 1213 aa14.88□□□□□ -0.03
ITGB4-212ENST00000584558 TTC6Q86TZ1 520 aa14.88□□□□□ -0.03
ITGB4-212ENST00000584558 FERMT3Q86UX7 667 aa14.88□□□□□ -0.03
ITGB4-212ENST00000584558 SECISBP2LQ93073 1101 aaKnown RBP14.88□□□□□ -0.03
ITGB4-212ENST00000584558 LIMCH1Q9UPQ0 1083 aa14.88□□□□□ -0.03
ITGB4-212ENST00000584558 GOLGA6L4A6NEF3 574 aa14.87□□□□□ -0.03
ITGB4-212ENST00000584558 OS9Q13438 667 aaPredicted RBP14.87□□□□□ -0.03
ITGB4-212ENST00000584558 RNF20Q5VTR2 975 aa14.87□□□□□ -0.03
ITGB4-212ENST00000584558 RUFY3Q7L099 469 aa14.87□□□□□ -0.03
ITGB4-212ENST00000584558 UBE3BQ7Z3V4 1068 aa14.87□□□□□ -0.03
ITGB4-212ENST00000584558 SYTL4Q96C24 671 aaPredicted RBP14.87□□□□□ -0.03
ITGB4-212ENST00000584558 COPRSQ9NQ92 184 aa14.87□□□□□ -0.03
ITGB4-212ENST00000584558 A0A087WZG4 1122 aa14.87□□□□□ -0.03
ITGB4-212ENST00000584558 EXOC5O00471 708 aa14.87□□□□□ -0.03
ITGB4-212ENST00000584558 LARGE1O95461 756 aa14.87□□□□□ -0.03
ITGB4-212ENST00000584558 H2AFXP16104 143 aaPredicted RBP14.87□□□□□ -0.03
ITGB4-212ENST00000584558 HSPA4P34932 840 aa14.87□□□□□ -0.03
ITGB4-212ENST00000584558 KLHL34Q8N239 644 aa14.87□□□□□ -0.03
ITGB4-212ENST00000584558 CLASRPQ8N2M8 674 aaKnown RBP14.87□□□□□ -0.03
ITGB4-212ENST00000584558 TXLNBQ8N3L3 684 aa14.87□□□□□ -0.03
ITGB4-212ENST00000584558 LRRN4CLQ8ND94 238 aa14.87□□□□□ -0.03
ITGB4-212ENST00000584558 SLC4A9Q96Q91 983 aa14.87□□□□□ -0.03
ITGB4-212ENST00000584558 THRAP3Q9Y2W1 955 aaKnown RBP14.87□□□□□ -0.03
ITGB4-212ENST00000584558 GYS2P54840 703 aa14.87□□□□□ -0.03
ITGB4-212ENST00000584558 ST5P78524 1137 aa14.87□□□□□ -0.03
ITGB4-212ENST00000584558 DNAJC10Q8IXB1 793 aa14.87□□□□□ -0.03
ITGB4-212ENST00000584558 TDRD7Q8NHU6 1098 aaKnown RBP14.87□□□□□ -0.03
ITGB4-212ENST00000584558 TEX13AQ9BXU3 409 aaPredicted RBP14.87□□□□□ -0.03
ITGB4-212ENST00000584558 SPATA31A6Q5VVP1 1343 aa14.86□□□□□ -0.03
ITGB4-212ENST00000584558 FOXO4P98177 505 aa14.86□□□□□ -0.03
ITGB4-212ENST00000584558 ARHGAP29Q52LW3 1261 aa14.86□□□□□ -0.03
ITGB4-212ENST00000584558 CDCA7Q9BWT1 371 aaPredicted RBP14.86□□□□□ -0.03
ITGB4-212ENST00000584558 CCDC191Q8NCU4 936 aa14.86□□□□□ -0.03
ITGB4-212ENST00000584558 KLHDC4Q8TBB5 520 aa14.86□□□□□ -0.03
ITGB4-212ENST00000584558 CCDC69A6NI79 296 aa14.85□□□□□ -0.03
ITGB4-212ENST00000584558 GOLGA6L19H0YKK7 550 aa14.85□□□□□ -0.03
ITGB4-212ENST00000584558 MYO1CO00159 1063 aa14.85□□□□□ -0.03
ITGB4-212ENST00000584558 TPM4P67936 248 aa14.85□□□□□ -0.03
ITGB4-212ENST00000584558 KRT85P78386 507 aa14.85□□□□□ -0.03
ITGB4-212ENST00000584558 PTPN12Q05209 780 aaKnown RBP14.85□□□□□ -0.03
ITGB4-212ENST00000584558 G3BP1Q13283 466 aaKnown RBP eCLIP14.85□□□□□ -0.03
ITGB4-212ENST00000584558 GORABQ5T7V8 394 aa14.85□□□□□ -0.03
ITGB4-212ENST00000584558 FNBP4Q8N3X1 1017 aaPredicted RBP14.85□□□□□ -0.03
ITGB4-212ENST00000584558 SMARCE1Q969G3 411 aa14.85□□□□□ -0.03
ITGB4-212ENST00000584558 EAF2Q96CJ1 260 aaPredicted RBP14.85□□□□□ -0.03
ITGB4-212ENST00000584558 IL17RAQ96F46 866 aa14.85□□□□□ -0.03
ITGB4-212ENST00000584558 QTRT2Q9H974 415 aaKnown RBP14.85□□□□□ -0.03
ITGB4-212ENST00000584558 RGS17Q9UGC6 210 aaPredicted RBP14.85□□□□□ -0.03
ITGB4-212ENST00000584558 LCMT1Q9UIC8 334 aa14.85□□□□□ -0.03
ITGB4-212ENST00000584558 CICQ96RK0 1608 aaPredicted RBP14.85□□□□□ -0.03
ITGB4-212ENST00000584558 DHX16O60231 1041 aaKnown RBP14.85□□□□□ -0.03
ITGB4-212ENST00000584558 GLRX3O76003 335 aaKnown RBP14.85□□□□□ -0.03
ITGB4-212ENST00000584558 MAP4K4O95819 1239 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms