RNA–Protein interactions for RNA: ENST00000582590.1

SLC46A1-203, Transcript of solute carrier family 46 member 1, humanhuman

TSL 2

Gene SLC46A1, Length 1,435 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-203ENST00000582590 UBE4AQ14139 1066 aa23.7■■□□□ 1.38
SLC46A1-203ENST00000582590 ATG9AQ7Z3C6 839 aa23.7■■□□□ 1.38
SLC46A1-203ENST00000582590 PODNQ7Z5L7 613 aa23.7■■□□□ 1.38
SLC46A1-203ENST00000582590 COA1Q9GZY4 146 aa23.7■■□□□ 1.38
SLC46A1-203ENST00000582590 HACL1Q9UJ83 578 aa23.7■■□□□ 1.38
SLC46A1-203ENST00000582590 PNMA6EA0A0J9YXQ4 647 aa23.69■■□□□ 1.38
SLC46A1-203ENST00000582590 TOMM70O94826 608 aa23.69■■□□□ 1.38
SLC46A1-203ENST00000582590 PDE8BO95263 885 aa23.69■■□□□ 1.38
SLC46A1-203ENST00000582590 DDX19BQ9UMR2 479 aa23.69■■□□□ 1.38
SLC46A1-203ENST00000582590 GMPSP49915 693 aaPredicted RBP23.68■■□□□ 1.38
SLC46A1-203ENST00000582590 TAF1DQ9H5J8 278 aaPredicted RBP23.68■■□□□ 1.38
SLC46A1-203ENST00000582590 LMOD1P29536 600 aaPredicted RBP23.67■■□□□ 1.38
SLC46A1-203ENST00000582590 EPHX2P34913 555 aa23.67■■□□□ 1.38
SLC46A1-203ENST00000582590 C1QTNF8P60827 252 aa23.67■■□□□ 1.38
SLC46A1-203ENST00000582590 ZBTB12Q9Y330 459 aaPredicted RBP23.67■■□□□ 1.38
SLC46A1-203ENST00000582590 VIL1P09327 827 aaKnown RBP23.66■■□□□ 1.38
SLC46A1-203ENST00000582590 IL15P40933 162 aaPredicted RBP23.66■■□□□ 1.38
SLC46A1-203ENST00000582590 ATP8B2P98198 1209 aa23.66■■□□□ 1.38
SLC46A1-203ENST00000582590 ZNF804AQ7Z570 1209 aa23.66■■□□□ 1.38
SLC46A1-203ENST00000582590 GPRC5DQ9NZD1 345 aa23.66■■□□□ 1.38
SLC46A1-203ENST00000582590 SCN4AP35499 1836 aa23.65■■□□□ 1.38
SLC46A1-203ENST00000582590 USP17L3A6NCW0 530 aa23.65■■□□□ 1.38
SLC46A1-203ENST00000582590 USP17L4A6NCW7 530 aa23.65■■□□□ 1.38
SLC46A1-203ENST00000582590 EPS15P42566 896 aa23.65■■□□□ 1.38
SLC46A1-203ENST00000582590 RRP1P56182 461 aaKnown RBP23.65■■□□□ 1.38
SLC46A1-203ENST00000582590 POLA2Q14181 598 aa23.65■■□□□ 1.38
SLC46A1-203ENST00000582590 PUM3Q15397 648 aaKnown RBP23.65■■□□□ 1.38
SLC46A1-203ENST00000582590 USP17L1Q7RTZ2 530 aa23.65■■□□□ 1.38
SLC46A1-203ENST00000582590 RBM46Q8TBY0 533 aaKnown RBP23.65■■□□□ 1.38
SLC46A1-203ENST00000582590 CD209Q9NNX6 404 aa23.65■■□□□ 1.38
SLC46A1-203ENST00000582590 SCN9AQ15858 1988 aa23.64■■□□□ 1.38
SLC46A1-203ENST00000582590 FGFR2P21802 821 aa23.64■■□□□ 1.37
SLC46A1-203ENST00000582590 SSH3Q8TE77 659 aa23.64■■□□□ 1.37
SLC46A1-203ENST00000582590 ZBTB40Q9NUA8 1239 aa23.64■■□□□ 1.37
SLC46A1-203ENST00000582590 CEP126Q9P2H0 1117 aa23.64■■□□□ 1.37
SLC46A1-203ENST00000582590 RPS12P25398 132 aaKnown RBP23.63■■□□□ 1.37
SLC46A1-203ENST00000582590 CEP85Q6P2H3 762 aa23.63■■□□□ 1.37
SLC46A1-203ENST00000582590 RSBN1LQ6PCB5 846 aaPredicted RBP23.63■■□□□ 1.37
SLC46A1-203ENST00000582590 DPF2Q92785 391 aa23.63■■□□□ 1.37
SLC46A1-203ENST00000582590 CHMP4BQ9H444 224 aaKnown RBP23.63■■□□□ 1.37
SLC46A1-203ENST00000582590 POTEIP0CG38 1075 aa23.62■■□□□ 1.37
SLC46A1-203ENST00000582590 POTEJP0CG39 1038 aa23.62■■□□□ 1.37
SLC46A1-203ENST00000582590 IL1R1P14778 569 aa23.62■■□□□ 1.37
SLC46A1-203ENST00000582590 GYG1P46976 350 aa23.62■■□□□ 1.37
SLC46A1-203ENST00000582590 PNMA8AQ86V59 439 aaPredicted RBP23.62■■□□□ 1.37
SLC46A1-203ENST00000582590 FAM84BQ96KN1 310 aaPredicted RBP23.62■■□□□ 1.37
SLC46A1-203ENST00000582590 ZNF609O15014 1411 aa23.62■■□□□ 1.37
SLC46A1-203ENST00000582590 EAPPQ56P03 285 aaPredicted RBP23.61■■□□□ 1.37
SLC46A1-203ENST00000582590 DACT2Q5SW24 774 aa23.61■■□□□ 1.37
SLC46A1-203ENST00000582590 STRIP1Q5VSL9 837 aa23.61■■□□□ 1.37
SLC46A1-203ENST00000582590 FBXW7Q969H0 707 aa23.61■■□□□ 1.37
SLC46A1-203ENST00000582590 CNOT7Q9UIV1 285 aaKnown RBP23.61■■□□□ 1.37
SLC46A1-203ENST00000582590 SHTN1A0MZ66 631 aa23.6■■□□□ 1.37
SLC46A1-203ENST00000582590 IFIT1P09914 478 aaKnown RBP23.6■■□□□ 1.37
SLC46A1-203ENST00000582590 HIBADHP31937 336 aaKnown RBP23.6■■□□□ 1.37
SLC46A1-203ENST00000582590 MICALL2Q8IY33 904 aa23.6■■□□□ 1.37
SLC46A1-203ENST00000582590 SMC1BQ8NDV3 1235 aa23.6■■□□□ 1.37
SLC46A1-203ENST00000582590 LPIN2Q92539 896 aa23.6■■□□□ 1.37
SLC46A1-203ENST00000582590 ADARB2Q9NS39 739 aaKnown RBP23.6■■□□□ 1.37
SLC46A1-203ENST00000582590 SLC5A1P13866 664 aa23.59■■□□□ 1.37
SLC46A1-203ENST00000582590 GTF2IP78347 998 aa23.59■■□□□ 1.37
SLC46A1-203ENST00000582590 ATP2B3Q16720 1220 aa23.59■■□□□ 1.37
SLC46A1-203ENST00000582590 TTLL5Q6EMB2 1281 aa23.59■■□□□ 1.37
SLC46A1-203ENST00000582590 FBXO33Q7Z6M2 555 aa23.59■■□□□ 1.37
SLC46A1-203ENST00000582590 LDHDQ86WU2 507 aa23.59■■□□□ 1.37
SLC46A1-203ENST00000582590 AGBL3Q8NEM8 1001 aa23.59■■□□□ 1.37
SLC46A1-203ENST00000582590 FSTL1Q12841 308 aa23.59■■□□□ 1.37
SLC46A1-203ENST00000582590 G3BP1Q13283 466 aaKnown RBP eCLIP23.59■■□□□ 1.37
SLC46A1-203ENST00000582590 CAVIN4Q5BKX8 364 aa23.59■■□□□ 1.37
SLC46A1-203ENST00000582590 USP50Q70EL3 339 aaPredicted RBP23.59■■□□□ 1.37
SLC46A1-203ENST00000582590 GMLQ99445 158 aa23.59■■□□□ 1.37
SLC46A1-203ENST00000582590 MXD3Q9BW11 206 aa23.59■■□□□ 1.37
SLC46A1-203ENST00000582590 H7C1D1 291 aa23.58■■□□□ 1.36
SLC46A1-203ENST00000582590 TFCP2Q12800 502 aa23.58■■□□□ 1.36
SLC46A1-203ENST00000582590 VPS37DQ86XT2 251 aa23.58■■□□□ 1.36
SLC46A1-203ENST00000582590 TDRD7Q8NHU6 1098 aaKnown RBP23.58■■□□□ 1.36
SLC46A1-203ENST00000582590 CHADLQ6NUI6 762 aa23.57■■□□□ 1.36
SLC46A1-203ENST00000582590 PSME4Q14997 1843 aa23.57■■□□□ 1.36
SLC46A1-203ENST00000582590 SURF6O75683 361 aaKnown RBP23.56■■□□□ 1.36
SLC46A1-203ENST00000582590 SASH1O94885 1247 aa23.56■■□□□ 1.36
SLC46A1-203ENST00000582590 BCAMP50895 628 aa23.56■■□□□ 1.36
SLC46A1-203ENST00000582590 RPAP2Q8IXW5 612 aaPredicted RBP23.56■■□□□ 1.36
SLC46A1-203ENST00000582590 TRPM4Q8TD43 1214 aa23.56■■□□□ 1.36
SLC46A1-203ENST00000582590 CLEC11AQ9Y240 323 aa23.56■■□□□ 1.36
SLC46A1-203ENST00000582590 NOP58Q9Y2X3 529 aaKnown RBP23.56■■□□□ 1.36
SLC46A1-203ENST00000582590 MYO3BQ8WXR4 1341 aa23.56■■□□□ 1.36
SLC46A1-203ENST00000582590 JAG2Q9Y219 1238 aa23.55■■□□□ 1.36
SLC46A1-203ENST00000582590 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.55■■□□□ 1.36
SLC46A1-203ENST00000582590 ADAMTSL1Q8N6G6 1762 aa23.55■■□□□ 1.36
SLC46A1-203ENST00000582590 USP17L8P0C7I0 530 aa23.54■■□□□ 1.36
SLC46A1-203ENST00000582590 HIRAP54198 1017 aaPredicted RBP23.54■■□□□ 1.36
SLC46A1-203ENST00000582590 ZNF280AP59817 542 aaPredicted RBP23.54■■□□□ 1.36
SLC46A1-203ENST00000582590 OS9Q13438 667 aaPredicted RBP23.54■■□□□ 1.36
SLC46A1-203ENST00000582590 SAMD7Q7Z3H4 446 aa23.54■■□□□ 1.36
SLC46A1-203ENST00000582590 SIRT2Q8IXJ6 389 aa23.54■■□□□ 1.36
SLC46A1-203ENST00000582590 AKAP2Q9Y2D5 859 aa23.54■■□□□ 1.36
SLC46A1-203ENST00000582590 FAM205AQ6ZU69 1335 aa23.54■■□□□ 1.36
SLC46A1-203ENST00000582590 ZNF646O15015 1829 aaPredicted RBP23.53■■□□□ 1.36
SLC46A1-203ENST00000582590 TBC1D10BQ4KMP7 808 aaPredicted RBP23.53■■□□□ 1.36
SLC46A1-203ENST00000582590 IQSEC3Q9UPP2 1182 aaPredicted RBP23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms