RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 SEC31BQ9NQW1 1179 aa16.78■□□□□ 0.28
CSNK1D-220ENST00000581737 ATP6V0A2Q9Y487 856 aa16.78■□□□□ 0.28
CSNK1D-220ENST00000581737 TLL2Q9Y6L7 1015 aa16.78■□□□□ 0.28
CSNK1D-220ENST00000581737 LMOD1P29536 600 aaPredicted RBP16.77■□□□□ 0.28
CSNK1D-220ENST00000581737 CELF1Q92879 486 aaKnown RBP16.77■□□□□ 0.28
CSNK1D-220ENST00000581737 MLLT1Q03111 559 aaPredicted RBP16.76■□□□□ 0.27
CSNK1D-220ENST00000581737 USP50Q70EL3 339 aaPredicted RBP16.76■□□□□ 0.27
CSNK1D-220ENST00000581737 SP8Q8IXZ3 490 aa16.76■□□□□ 0.27
CSNK1D-220ENST00000581737 MPHOSPH8Q99549 860 aa16.76■□□□□ 0.27
CSNK1D-220ENST00000581737 TNRC18O15417 2968 aaPredicted RBP16.75■□□□□ 0.27
CSNK1D-220ENST00000581737 ECE1P42892 770 aa16.75■□□□□ 0.27
CSNK1D-220ENST00000581737 MTX1Q13505 466 aa16.75■□□□□ 0.27
CSNK1D-220ENST00000581737 CENPQQ7L2Z9 268 aaPredicted RBP16.75■□□□□ 0.27
CSNK1D-220ENST00000581737 BSDC1Q9NW68 430 aaPredicted RBP16.75■□□□□ 0.27
CSNK1D-220ENST00000581737 AOC3Q16853 763 aa16.74■□□□□ 0.27
CSNK1D-220ENST00000581737 DLK2Q6UY11 383 aa16.74■□□□□ 0.27
CSNK1D-220ENST00000581737 SAPCD2Q86UD0 394 aa16.74■□□□□ 0.27
CSNK1D-220ENST00000581737 ZIC5Q96T25 663 aa16.74■□□□□ 0.27
CSNK1D-220ENST00000581737 GLIS2Q9BZE0 524 aaPredicted RBP16.74■□□□□ 0.27
CSNK1D-220ENST00000581737 GPRC5DQ9NZD1 345 aa16.74■□□□□ 0.27
CSNK1D-220ENST00000581737 COL4A1P02462 1669 aa16.74■□□□□ 0.27
CSNK1D-220ENST00000581737 PPIP5K2O43314 1243 aa16.73■□□□□ 0.27
CSNK1D-220ENST00000581737 CELF2O95319 508 aaKnown RBP16.73■□□□□ 0.27
CSNK1D-220ENST00000581737 CXCL9Q07325 125 aa16.73■□□□□ 0.27
CSNK1D-220ENST00000581737 BEGAINQ9BUH8 593 aa16.73■□□□□ 0.27
CSNK1D-220ENST00000581737 MCOLN1Q9GZU1 580 aa16.73■□□□□ 0.27
CSNK1D-220ENST00000581737 ZBTB40Q9NUA8 1239 aa16.73■□□□□ 0.27
CSNK1D-220ENST00000581737 SHTN1A0MZ66 631 aa16.72■□□□□ 0.27
CSNK1D-220ENST00000581737 SRGAP3O43295 1099 aa16.72■□□□□ 0.27
CSNK1D-220ENST00000581737 MAP2K2P36507 400 aa16.72■□□□□ 0.27
CSNK1D-220ENST00000581737 GMPSP49915 693 aaPredicted RBP16.72■□□□□ 0.27
CSNK1D-220ENST00000581737 HIRAP54198 1017 aaPredicted RBP16.72■□□□□ 0.27
CSNK1D-220ENST00000581737 DPP8Q6V1X1 898 aaPredicted RBP16.72■□□□□ 0.27
CSNK1D-220ENST00000581737 LDHAL6AQ6ZMR3 332 aa16.72■□□□□ 0.27
CSNK1D-220ENST00000581737 NIM1KQ8IY84 436 aa16.72■□□□□ 0.27
CSNK1D-220ENST00000581737 MPNDQ8N594 471 aa16.72■□□□□ 0.27
CSNK1D-220ENST00000581737 SUPT20HQ8NEM7 779 aa16.72■□□□□ 0.27
CSNK1D-220ENST00000581737 CNNM1Q9NRU3 951 aa16.72■□□□□ 0.27
CSNK1D-220ENST00000581737 ADARB2Q9NS39 739 aaKnown RBP16.72■□□□□ 0.27
CSNK1D-220ENST00000581737 ANKRD2Q9GZV1 360 aa16.71■□□□□ 0.27
CSNK1D-220ENST00000581737 C1orf115Q9H7X2 142 aa16.71■□□□□ 0.27
CSNK1D-220ENST00000581737 FBXO3Q9UK99 471 aa16.71■□□□□ 0.27
CSNK1D-220ENST00000581737 XDHP47989 1333 aa16.7■□□□□ 0.26
CSNK1D-220ENST00000581737 A0A1B0GUL6 1792 aa16.7■□□□□ 0.26
CSNK1D-220ENST00000581737 ANKIB1Q9P2G1 1089 aa16.7■□□□□ 0.26
CSNK1D-220ENST00000581737 PGAP2Q9UHJ9 254 aa16.7■□□□□ 0.26
CSNK1D-220ENST00000581737 HMMRO75330 724 aa16.69■□□□□ 0.26
CSNK1D-220ENST00000581737 RFX5P48382 616 aaPredicted RBP16.69■□□□□ 0.26
CSNK1D-220ENST00000581737 ATP8B2P98198 1209 aa16.69■□□□□ 0.26
CSNK1D-220ENST00000581737 CIAPIN1Q6FI81 312 aa16.69■□□□□ 0.26
CSNK1D-220ENST00000581737 CEP85Q6P2H3 762 aa16.69■□□□□ 0.26
CSNK1D-220ENST00000581737 RPAP2Q8IXW5 612 aaPredicted RBP16.69■□□□□ 0.26
CSNK1D-220ENST00000581737 TRPM4Q8TD43 1214 aa16.69■□□□□ 0.26
CSNK1D-220ENST00000581737 ZNF594Q96JF6 807 aaPredicted RBP16.69■□□□□ 0.26
CSNK1D-220ENST00000581737 ZNF408Q9H9D4 720 aa16.69■□□□□ 0.26
CSNK1D-220ENST00000581737 COPRSQ9NQ92 184 aa16.69■□□□□ 0.26
CSNK1D-220ENST00000581737 PODXL2Q9NZ53 605 aa16.69■□□□□ 0.26
CSNK1D-220ENST00000581737 ZNRF3Q9ULT6 936 aa16.69■□□□□ 0.26
CSNK1D-220ENST00000581737 MINPP1Q9UNW1 487 aa16.69■□□□□ 0.26
CSNK1D-220ENST00000581737 NSFL1CQ9UNZ2 370 aaKnown RBP16.69■□□□□ 0.26
CSNK1D-220ENST00000581737 MROH5Q6ZUA9 1318 aa16.69■□□□□ 0.26
CSNK1D-220ENST00000581737 CIAO1O76071 339 aa16.68■□□□□ 0.26
CSNK1D-220ENST00000581737 GPSM2P81274 684 aa16.68■□□□□ 0.26
CSNK1D-220ENST00000581737 PTPN12Q05209 780 aaKnown RBP16.68■□□□□ 0.26
CSNK1D-220ENST00000581737 SSH3Q8TE77 659 aa16.68■□□□□ 0.26
CSNK1D-220ENST00000581737 RTFDC1Q9BY42 306 aaPredicted RBP16.68■□□□□ 0.26
CSNK1D-220ENST00000581737 VPS33BQ9H267 617 aa16.68■□□□□ 0.26
CSNK1D-220ENST00000581737 GGA1Q9UJY5 639 aa16.68■□□□□ 0.26
CSNK1D-220ENST00000581737 DUOX1Q9NRD9 1551 aa16.68■□□□□ 0.26
CSNK1D-220ENST00000581737 YDJCA8MPS7 323 aa16.67■□□□□ 0.26
CSNK1D-220ENST00000581737 EYA2O00167 538 aa16.67■□□□□ 0.26
CSNK1D-220ENST00000581737 RAD17O75943 681 aa16.67■□□□□ 0.26
CSNK1D-220ENST00000581737 ATP2B4P23634 1241 aa16.67■□□□□ 0.26
CSNK1D-220ENST00000581737 CHRNDQ07001 517 aa16.67■□□□□ 0.26
CSNK1D-220ENST00000581737 EYA3Q99504 573 aa16.67■□□□□ 0.26
CSNK1D-220ENST00000581737 LEMD3Q9Y2U8 911 aa16.67■□□□□ 0.26
CSNK1D-220ENST00000581737 PNMA6EA0A0J9YXQ4 647 aa16.66■□□□□ 0.26
CSNK1D-220ENST00000581737 C6orf229H3BNL8 230 aa16.66■□□□□ 0.26
CSNK1D-220ENST00000581737 UFL1O94874 794 aa16.66■□□□□ 0.26
CSNK1D-220ENST00000581737 IL15P40933 162 aaPredicted RBP16.66■□□□□ 0.26
CSNK1D-220ENST00000581737 KCNJ4P48050 445 aa16.66■□□□□ 0.26
CSNK1D-220ENST00000581737 DGKZQ13574 1117 aa16.66■□□□□ 0.26
CSNK1D-220ENST00000581737 POLA2Q14181 598 aa16.66■□□□□ 0.26
CSNK1D-220ENST00000581737 METTL24Q5JXM2 366 aa16.66■□□□□ 0.26
CSNK1D-220ENST00000581737 RIPOR2Q9Y4F9 1068 aa16.66■□□□□ 0.26
CSNK1D-220ENST00000581737 TRPM7Q96QT4 1865 aa16.65■□□□□ 0.26
CSNK1D-220ENST00000581737 USP48Q86UV5 1035 aa16.65■□□□□ 0.26
CSNK1D-220ENST00000581737 KLHDC4Q8TBB5 520 aa16.65■□□□□ 0.26
CSNK1D-220ENST00000581737 TBC1D16Q8TBP0 767 aa16.65■□□□□ 0.26
CSNK1D-220ENST00000581737 HHIPL1Q96JK4 782 aa16.65■□□□□ 0.26
CSNK1D-220ENST00000581737 PUS3Q9BZE2 481 aaKnown RBP16.65■□□□□ 0.26
CSNK1D-220ENST00000581737 SIL1Q9H173 461 aa16.65■□□□□ 0.26
CSNK1D-220ENST00000581737 RWDD1Q9H446 243 aaPredicted RBP16.65■□□□□ 0.26
CSNK1D-220ENST00000581737 EGFRP00533 1210 aa16.64■□□□□ 0.25
CSNK1D-220ENST00000581737 KIAA2012Q0VF49 1180 aa16.64■□□□□ 0.25
CSNK1D-220ENST00000581737 LRRC24Q50LG9 513 aa16.64■□□□□ 0.25
CSNK1D-220ENST00000581737 PA2G4Q9UQ80 394 aaKnown RBP16.64■□□□□ 0.25
CSNK1D-220ENST00000581737 ZBTB12Q9Y330 459 aaPredicted RBP16.64■□□□□ 0.25
CSNK1D-220ENST00000581737 CA12O43570 354 aa16.63■□□□□ 0.25
CSNK1D-220ENST00000581737 G3BP1Q13283 466 aaKnown RBP eCLIP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms