RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 CCDC102BQ68D86 513 aa5.72□□□□□ -1.49
KPNB1-208ENST00000580019 SHISA5Q8N114 240 aa5.72□□□□□ -1.49
KPNB1-208ENST00000580019 PPP1R16BQ96T49 567 aa5.72□□□□□ -1.49
KPNB1-208ENST00000580019 ATAD2Q6PL18 1390 aa5.71□□□□□ -1.5
KPNB1-208ENST00000580019 FAM95CA0A1B0GW59 222 aa5.71□□□□□ -1.5
KPNB1-208ENST00000580019 LRRC10BA6NIK2 292 aa5.71□□□□□ -1.5
KPNB1-208ENST00000580019 CDC25BP30305 580 aa5.71□□□□□ -1.5
KPNB1-208ENST00000580019 NFKBIBQ15653 356 aa5.71□□□□□ -1.5
KPNB1-208ENST00000580019 DBX2Q6ZNG2 339 aa5.71□□□□□ -1.5
KPNB1-208ENST00000580019 ANKLE2Q86XL3 938 aa5.71□□□□□ -1.5
KPNB1-208ENST00000580019 STK11IPQ8N1F8 1099 aa5.71□□□□□ -1.5
KPNB1-208ENST00000580019 GAS2L2Q8NHY3 880 aa5.71□□□□□ -1.5
KPNB1-208ENST00000580019 BCL7CQ8WUZ0 217 aaPredicted RBP5.71□□□□□ -1.5
KPNB1-208ENST00000580019 RUSC1Q9BVN2 902 aa5.71□□□□□ -1.5
KPNB1-208ENST00000580019 LACRTQ9GZZ8 138 aa5.71□□□□□ -1.5
KPNB1-208ENST00000580019 RC3H2Q9HBD1 1191 aaKnown RBP5.71□□□□□ -1.5
KPNB1-208ENST00000580019 SEC31BQ9NQW1 1179 aa5.71□□□□□ -1.5
KPNB1-208ENST00000580019 ZC3H7BQ9UGR2 993 aaKnown RBP5.71□□□□□ -1.5
KPNB1-208ENST00000580019 MMP20O60882 483 aa5.7□□□□□ -1.5
KPNB1-208ENST00000580019 CRTC2Q53ET0 693 aaPredicted RBP5.7□□□□□ -1.5
KPNB1-208ENST00000580019 C14orf37Q86TY3 774 aa5.7□□□□□ -1.5
KPNB1-208ENST00000580019 FAM53CQ9NYF3 392 aa5.7□□□□□ -1.5
KPNB1-208ENST00000580019 ZBTB7BO15156 539 aaPredicted RBP5.69□□□□□ -1.5
KPNB1-208ENST00000580019 INHBBP09529 407 aa5.69□□□□□ -1.5
KPNB1-208ENST00000580019 WASHC4Q2M389 1173 aa5.69□□□□□ -1.5
KPNB1-208ENST00000580019 ZNF574Q6ZN55 896 aaPredicted RBP5.69□□□□□ -1.5
KPNB1-208ENST00000580019 ZAR1Q86SH2 424 aa5.69□□□□□ -1.5
KPNB1-208ENST00000580019 NFATC2IPQ8NCF5 419 aa5.69□□□□□ -1.5
KPNB1-208ENST00000580019 KLHDC7BQ96G42 594 aa5.69□□□□□ -1.5
KPNB1-208ENST00000580019 TBC1D32Q96NH3 1257 aa5.69□□□□□ -1.5
KPNB1-208ENST00000580019 XYLBO75191 536 aa5.68□□□□□ -1.5
KPNB1-208ENST00000580019 SMNDC1O75940 238 aaKnown RBP eCLIP5.68□□□□□ -1.5
KPNB1-208ENST00000580019 ADMP35318 185 aa5.68□□□□□ -1.5
KPNB1-208ENST00000580019 ATP1A2P50993 1020 aa5.68□□□□□ -1.5
KPNB1-208ENST00000580019 DUSP27Q5VZP5 1158 aa5.68□□□□□ -1.5
KPNB1-208ENST00000580019 TSEN2Q8NCE0 465 aaKnown RBP5.68□□□□□ -1.5
KPNB1-208ENST00000580019 CHMP7Q8WUX9 453 aaPredicted RBP5.68□□□□□ -1.5
KPNB1-208ENST00000580019 LRRC4CQ9HCJ2 640 aa5.68□□□□□ -1.5
KPNB1-208ENST00000580019 KIAA1024Q9UPX6 916 aa5.68□□□□□ -1.5
KPNB1-208ENST00000580019 MEGF11A6BM72 1044 aa5.67□□□□□ -1.5
KPNB1-208ENST00000580019 PSPNO60542 156 aa5.67□□□□□ -1.5
KPNB1-208ENST00000580019 MICAL2O94851 1124 aa5.67□□□□□ -1.5
KPNB1-208ENST00000580019 CEP135Q66GS9 1140 aa5.67□□□□□ -1.5
KPNB1-208ENST00000580019 SPRED2Q7Z698 418 aa5.67□□□□□ -1.5
KPNB1-208ENST00000580019 WFDC3Q8IUB2 231 aa5.67□□□□□ -1.5
KPNB1-208ENST00000580019 SCG3Q8WXD2 468 aaKnown RBP5.67□□□□□ -1.5
KPNB1-208ENST00000580019 KLK14Q9P0G3 267 aa5.67□□□□□ -1.5
KPNB1-208ENST00000580019 RTCBQ9Y3I0 505 aaKnown RBP5.67□□□□□ -1.5
KPNB1-208ENST00000580019 FAM170BA6NMN3 283 aa5.66□□□□□ -1.5
KPNB1-208ENST00000580019 FAM177BA6PVY3 158 aa5.66□□□□□ -1.5
KPNB1-208ENST00000580019 AMIGO3Q86WK7 504 aa5.66□□□□□ -1.5
KPNB1-208ENST00000580019 WNT8BQ93098 351 aa5.66□□□□□ -1.5
KPNB1-208ENST00000580019 PRKAG2Q9UGJ0 569 aa5.66□□□□□ -1.5
KPNB1-208ENST00000580019 RNASE1P07998 156 aaKnown RBP5.65□□□□□ -1.5
KPNB1-208ENST00000580019 EPHA1P21709 976 aa5.65□□□□□ -1.5
KPNB1-208ENST00000580019 FUT4P22083 530 aa5.65□□□□□ -1.5
KPNB1-208ENST00000580019 CYP27A1Q02318 531 aa5.65□□□□□ -1.5
KPNB1-208ENST00000580019 MLANAQ16655 118 aa5.65□□□□□ -1.5
KPNB1-208ENST00000580019 MBNL3Q9NUK0 354 aaKnown RBP5.65□□□□□ -1.5
KPNB1-208ENST00000580019 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.65□□□□□ -1.5
KPNB1-208ENST00000580019 USP17L5A8MUK1 530 aa5.64□□□□□ -1.51
KPNB1-208ENST00000580019 RASA1P20936 1047 aa5.64□□□□□ -1.51
KPNB1-208ENST00000580019 RANGAP1P46060 587 aaPredicted RBP5.64□□□□□ -1.51
KPNB1-208ENST00000580019 USP11P51784 963 aa5.64□□□□□ -1.51
KPNB1-208ENST00000580019 NLRP12P59046 1061 aa5.64□□□□□ -1.51
KPNB1-208ENST00000580019 PIP4K2BP78356 416 aa5.64□□□□□ -1.51
KPNB1-208ENST00000580019 ATP11AP98196 1134 aa5.64□□□□□ -1.51
KPNB1-208ENST00000580019 KRTAP1-1Q07627 177 aa5.64□□□□□ -1.51
KPNB1-208ENST00000580019 NUTM2GQ5VZR2 741 aa5.64□□□□□ -1.51
KPNB1-208ENST00000580019 DEPDC4Q8N2C3 294 aa5.64□□□□□ -1.51
KPNB1-208ENST00000580019 C12orf50Q8NA57 414 aaPredicted RBP5.64□□□□□ -1.51
KPNB1-208ENST00000580019 MISP3Q96FF7 219 aa5.64□□□□□ -1.51
KPNB1-208ENST00000580019 SPACA7Q96KW9 195 aa5.64□□□□□ -1.51
KPNB1-208ENST00000580019 OSGEPQ9NPF4 335 aa5.64□□□□□ -1.51
KPNB1-208ENST00000580019 DGKZQ13574 1117 aa5.63□□□□□ -1.51
KPNB1-208ENST00000580019 CMTR1Q8N1G2 835 aaKnown RBP5.63□□□□□ -1.51
KPNB1-208ENST00000580019 LARGE2Q8N3Y3 721 aa5.63□□□□□ -1.51
KPNB1-208ENST00000580019 LRRN4CLQ8ND94 238 aa5.63□□□□□ -1.51
KPNB1-208ENST00000580019 FBLIM1Q8WUP2 373 aa5.63□□□□□ -1.51
KPNB1-208ENST00000580019 RELTQ969Z4 430 aa5.63□□□□□ -1.51
KPNB1-208ENST00000580019 YIPF2Q9BWQ6 316 aa5.63□□□□□ -1.51
KPNB1-208ENST00000580019 SH2B1Q9NRF2 756 aaPredicted RBP5.63□□□□□ -1.51
KPNB1-208ENST00000580019 USP20Q9Y2K6 914 aa5.63□□□□□ -1.51
KPNB1-208ENST00000580019 RBM19Q9Y4C8 960 aaKnown RBP5.63□□□□□ -1.51
KPNB1-208ENST00000580019 PALM3A6NDB9 673 aaPredicted RBP5.62□□□□□ -1.51
KPNB1-208ENST00000580019 OPLAHO14841 1288 aa5.62□□□□□ -1.51
KPNB1-208ENST00000580019 PTPRAP18433 802 aa5.62□□□□□ -1.51
KPNB1-208ENST00000580019 CLDN10P78369 228 aa5.62□□□□□ -1.51
KPNB1-208ENST00000580019 HYAL2Q12891 473 aa5.62□□□□□ -1.51
KPNB1-208ENST00000580019 ZSWIM9Q86XI8 627 aa5.62□□□□□ -1.51
KPNB1-208ENST00000580019 SMG8Q8ND04 991 aaKnown RBP5.62□□□□□ -1.51
KPNB1-208ENST00000580019 GATA6Q92908 595 aa5.62□□□□□ -1.51
KPNB1-208ENST00000580019 CYP4F12Q9HCS2 524 aa5.62□□□□□ -1.51
KPNB1-208ENST00000580019 H3BRJ5 948 aa5.61□□□□□ -1.51
KPNB1-208ENST00000580019 TIAF1O95411 115 aa5.61□□□□□ -1.51
KPNB1-208ENST00000580019 CABP4P57796 275 aa5.61□□□□□ -1.51
KPNB1-208ENST00000580019 CDPF1Q6NVV7 123 aa5.61□□□□□ -1.51
KPNB1-208ENST00000580019 SYDE1Q6ZW31 735 aaPredicted RBP5.61□□□□□ -1.51
KPNB1-208ENST00000580019 PI4K2BQ8TCG2 481 aa5.61□□□□□ -1.51
KPNB1-208ENST00000580019 SUGCTQ9HAC7 445 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms