RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 ATP8B2P98198 1209 aa12.48□□□□□ -0.41
MKS1-208ENST00000579358 POLA2Q14181 598 aa12.48□□□□□ -0.41
MKS1-208ENST00000579358 C20orf194Q5TEA3 1177 aa12.48□□□□□ -0.41
MKS1-208ENST00000579358 ATG9AQ7Z3C6 839 aa12.48□□□□□ -0.41
MKS1-208ENST00000579358 TXNRD3Q86VQ6 643 aa12.48□□□□□ -0.41
MKS1-208ENST00000579358 HACL1Q9UJ83 578 aa12.48□□□□□ -0.41
MKS1-208ENST00000579358 GJA3Q9Y6H8 435 aa12.48□□□□□ -0.41
MKS1-208ENST00000579358 CCDC88AQ3V6T2 1871 aa12.47□□□□□ -0.41
MKS1-208ENST00000579358 PSMD14O00487 310 aa12.47□□□□□ -0.41
MKS1-208ENST00000579358 RPS12P25398 132 aaKnown RBP12.47□□□□□ -0.41
MKS1-208ENST00000579358 LMOD1P29536 600 aaPredicted RBP12.47□□□□□ -0.41
MKS1-208ENST00000579358 PUM3Q15397 648 aaKnown RBP12.47□□□□□ -0.41
MKS1-208ENST00000579358 CEP85Q6P2H3 762 aa12.47□□□□□ -0.41
MKS1-208ENST00000579358 ZNF804AQ7Z570 1209 aa12.47□□□□□ -0.41
MKS1-208ENST00000579358 C16orf71Q8IYS4 520 aaPredicted RBP12.47□□□□□ -0.41
MKS1-208ENST00000579358 SSH3Q8TE77 659 aa12.47□□□□□ -0.41
MKS1-208ENST00000579358 SIL1Q9H173 461 aa12.47□□□□□ -0.41
MKS1-208ENST00000579358 C1orf115Q9H7X2 142 aa12.47□□□□□ -0.41
MKS1-208ENST00000579358 ZBTB40Q9NUA8 1239 aa12.47□□□□□ -0.41
MKS1-208ENST00000579358 PA2G4Q9UQ80 394 aaKnown RBP12.47□□□□□ -0.41
MKS1-208ENST00000579358 TOMM70O94826 608 aa12.46□□□□□ -0.41
MKS1-208ENST00000579358 VIL1P09327 827 aaKnown RBP12.46□□□□□ -0.41
MKS1-208ENST00000579358 FGFR2P21802 821 aa12.46□□□□□ -0.41
MKS1-208ENST00000579358 GMPSP49915 693 aaPredicted RBP12.46□□□□□ -0.41
MKS1-208ENST00000579358 RBM46Q8TBY0 533 aaKnown RBP12.46□□□□□ -0.41
MKS1-208ENST00000579358 DPF2Q92785 391 aa12.46□□□□□ -0.41
MKS1-208ENST00000579358 TAF1DQ9H5J8 278 aaPredicted RBP12.46□□□□□ -0.41
MKS1-208ENST00000579358 CD209Q9NNX6 404 aa12.46□□□□□ -0.41
MKS1-208ENST00000579358 GPRC5DQ9NZD1 345 aa12.46□□□□□ -0.41
MKS1-208ENST00000579358 CEP126Q9P2H0 1117 aa12.46□□□□□ -0.41
MKS1-208ENST00000579358 A0A1B0GUL6 1792 aa12.46□□□□□ -0.42
MKS1-208ENST00000579358 USP17L3A6NCW0 530 aa12.45□□□□□ -0.42
MKS1-208ENST00000579358 USP17L4A6NCW7 530 aa12.45□□□□□ -0.42
MKS1-208ENST00000579358 IFIT1P09914 478 aaKnown RBP12.45□□□□□ -0.42
MKS1-208ENST00000579358 SLC5A1P13866 664 aa12.45□□□□□ -0.42
MKS1-208ENST00000579358 IL1R1P14778 569 aa12.45□□□□□ -0.42
MKS1-208ENST00000579358 EPHX2P34913 555 aa12.45□□□□□ -0.42
MKS1-208ENST00000579358 STRIP1Q5VSL9 837 aa12.45□□□□□ -0.42
MKS1-208ENST00000579358 USP17L1Q7RTZ2 530 aa12.45□□□□□ -0.42
MKS1-208ENST00000579358 PNMA8AQ86V59 439 aaPredicted RBP12.45□□□□□ -0.42
MKS1-208ENST00000579358 RPAP2Q8IXW5 612 aaPredicted RBP12.45□□□□□ -0.42
MKS1-208ENST00000579358 AGBL3Q8NEM8 1001 aa12.45□□□□□ -0.42
MKS1-208ENST00000579358 LPIN2Q92539 896 aa12.45□□□□□ -0.42
MKS1-208ENST00000579358 KCNQ5Q9NR82 932 aa12.45□□□□□ -0.42
MKS1-208ENST00000579358 MYO3BQ8WXR4 1341 aa12.44□□□□□ -0.42
MKS1-208ENST00000579358 HIBADHP31937 336 aaKnown RBP12.44□□□□□ -0.42
MKS1-208ENST00000579358 CAVIN4Q5BKX8 364 aa12.44□□□□□ -0.42
MKS1-208ENST00000579358 RSBN1LQ6PCB5 846 aaPredicted RBP12.44□□□□□ -0.42
MKS1-208ENST00000579358 FAM84BQ96KN1 310 aaPredicted RBP12.44□□□□□ -0.42
MKS1-208ENST00000579358 NOP58Q9Y2X3 529 aaKnown RBP12.44□□□□□ -0.42
MKS1-208ENST00000579358 ZBTB12Q9Y330 459 aaPredicted RBP12.44□□□□□ -0.42
MKS1-208ENST00000579358 EPS15P42566 896 aa12.43□□□□□ -0.42
MKS1-208ENST00000579358 C1QTNF8P60827 252 aa12.43□□□□□ -0.42
MKS1-208ENST00000579358 FKBP1AP62942 108 aaKnown RBP12.43□□□□□ -0.42
MKS1-208ENST00000579358 FSTL1Q12841 308 aa12.43□□□□□ -0.42
MKS1-208ENST00000579358 G3BP1Q13283 466 aaKnown RBP eCLIP12.43□□□□□ -0.42
MKS1-208ENST00000579358 ATP2B3Q16720 1220 aa12.43□□□□□ -0.42
MKS1-208ENST00000579358 DACT2Q5SW24 774 aa12.43□□□□□ -0.42
MKS1-208ENST00000579358 USP50Q70EL3 339 aaPredicted RBP12.43□□□□□ -0.42
MKS1-208ENST00000579358 FBXO33Q7Z6M2 555 aa12.43□□□□□ -0.42
MKS1-208ENST00000579358 LDHDQ86WU2 507 aa12.43□□□□□ -0.42
MKS1-208ENST00000579358 MICALL2Q8IY33 904 aa12.43□□□□□ -0.42
MKS1-208ENST00000579358 SMC1BQ8NDV3 1235 aa12.43□□□□□ -0.42
MKS1-208ENST00000579358 TDRD7Q8NHU6 1098 aaKnown RBP12.43□□□□□ -0.42
MKS1-208ENST00000579358 GMLQ99445 158 aa12.43□□□□□ -0.42
MKS1-208ENST00000579358 ADARB2Q9NS39 739 aaKnown RBP12.43□□□□□ -0.42
MKS1-208ENST00000579358 AKAP2Q9Y2D5 859 aa12.43□□□□□ -0.42
MKS1-208ENST00000579358 SCN4AP35499 1836 aa12.42□□□□□ -0.42
MKS1-208ENST00000579358 ZBTB22O15209 634 aa12.42□□□□□ -0.42
MKS1-208ENST00000579358 HMMRO75330 724 aa12.42□□□□□ -0.42
MKS1-208ENST00000579358 GYG1P46976 350 aa12.42□□□□□ -0.42
MKS1-208ENST00000579358 MMP14P50281 582 aa12.42□□□□□ -0.42
MKS1-208ENST00000579358 GTF2IP78347 998 aa12.42□□□□□ -0.42
MKS1-208ENST00000579358 TTLL5Q6EMB2 1281 aa12.42□□□□□ -0.42
MKS1-208ENST00000579358 VPS37DQ86XT2 251 aa12.42□□□□□ -0.42
MKS1-208ENST00000579358 CNOT7Q9UIV1 285 aaKnown RBP12.42□□□□□ -0.42
MKS1-208ENST00000579358 FAM205AQ6ZU69 1335 aa12.41□□□□□ -0.42
MKS1-208ENST00000579358 H7C1D1 291 aa12.41□□□□□ -0.42
MKS1-208ENST00000579358 SURF6O75683 361 aaKnown RBP12.41□□□□□ -0.42
MKS1-208ENST00000579358 SASH1O94885 1247 aa12.41□□□□□ -0.42
MKS1-208ENST00000579358 TFCP2Q12800 502 aa12.41□□□□□ -0.42
MKS1-208ENST00000579358 EAPPQ56P03 285 aaPredicted RBP12.41□□□□□ -0.42
MKS1-208ENST00000579358 HSP90AB4PQ58FF6 505 aa12.41□□□□□ -0.42
MKS1-208ENST00000579358 FBXW7Q969H0 707 aa12.41□□□□□ -0.42
MKS1-208ENST00000579358 GPR108Q9NPR9 543 aa12.41□□□□□ -0.42
MKS1-208ENST00000579358 POTEIP0CG38 1075 aa12.4□□□□□ -0.42
MKS1-208ENST00000579358 POTEJP0CG39 1038 aa12.4□□□□□ -0.42
MKS1-208ENST00000579358 BCAMP50895 628 aa12.4□□□□□ -0.42
MKS1-208ENST00000579358 ZNF280AP59817 542 aaPredicted RBP12.4□□□□□ -0.42
MKS1-208ENST00000579358 OS9Q13438 667 aaPredicted RBP12.4□□□□□ -0.42
MKS1-208ENST00000579358 CHADLQ6NUI6 762 aa12.4□□□□□ -0.42
MKS1-208ENST00000579358 ERC1Q8IUD2 1116 aa12.4□□□□□ -0.42
MKS1-208ENST00000579358 SIRT2Q8IXJ6 389 aa12.4□□□□□ -0.42
MKS1-208ENST00000579358 SCN9AQ15858 1988 aa12.39□□□□□ -0.43
MKS1-208ENST00000579358 ADAMTSL1Q8N6G6 1762 aa12.39□□□□□ -0.43
MKS1-208ENST00000579358 A0A1B0GUL7 405 aa12.39□□□□□ -0.43
MKS1-208ENST00000579358 USP17L8P0C7I0 530 aa12.39□□□□□ -0.43
MKS1-208ENST00000579358 ZC3H15Q8WU90 426 aaKnown RBP12.39□□□□□ -0.43
MKS1-208ENST00000579358 SHTN1A0MZ66 631 aa12.38□□□□□ -0.43
MKS1-208ENST00000579358 SEMA3EO15041 775 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms