RNA–Protein interactions for RNA: ENST00000577498.1

IFT20-204, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-204ENST00000577498 IPO9Q96P70 1041 aaKnown RBP18.31■□□□□ 0.52
IFT20-204ENST00000577498 MCAMP43121 646 aa18.3■□□□□ 0.52
IFT20-204ENST00000577498 NMIQ13287 307 aaPredicted RBP18.3■□□□□ 0.52
IFT20-204ENST00000577498 TTF1Q15361 905 aaPredicted RBP18.3■□□□□ 0.52
IFT20-204ENST00000577498 CWC27Q6UX04 472 aaKnown RBP18.3■□□□□ 0.52
IFT20-204ENST00000577498 LEMD3Q9Y2U8 911 aa18.3■□□□□ 0.52
IFT20-204ENST00000577498 ZNF804BA4D1E1 1349 aa18.29■□□□□ 0.52
IFT20-204ENST00000577498 ZFYP08048 801 aaPredicted RBP18.29■□□□□ 0.52
IFT20-204ENST00000577498 KCNJ4P48050 445 aa18.29■□□□□ 0.52
IFT20-204ENST00000577498 FKBP4Q02790 459 aaKnown RBP eCLIP18.29■□□□□ 0.52
IFT20-204ENST00000577498 SCARF1Q14162 830 aa18.29■□□□□ 0.52
IFT20-204ENST00000577498 KIAA1211Q6ZU35 1233 aa18.29■□□□□ 0.52
IFT20-204ENST00000577498 ANO2Q9NQ90 1003 aa18.29■□□□□ 0.52
IFT20-204ENST00000577498 GNL3LQ9NVN8 582 aaKnown RBP18.29■□□□□ 0.52
IFT20-204ENST00000577498 NDUFB9Q9Y6M9 179 aa18.29■□□□□ 0.52
IFT20-204ENST00000577498 AKAP11Q9UKA4 1901 aa18.29■□□□□ 0.52
IFT20-204ENST00000577498 XDHP47989 1333 aa18.28■□□□□ 0.52
IFT20-204ENST00000577498 SNAP23O00161 211 aa18.28■□□□□ 0.52
IFT20-204ENST00000577498 SRGNP10124 158 aa18.28■□□□□ 0.52
IFT20-204ENST00000577498 MCCP23508 829 aa18.28■□□□□ 0.52
IFT20-204ENST00000577498 ZAP70P43403 619 aa18.28■□□□□ 0.52
IFT20-204ENST00000577498 CAVIN4Q5BKX8 364 aa18.28■□□□□ 0.52
IFT20-204ENST00000577498 ALDH1B1P30837 517 aa18.27■□□□□ 0.52
IFT20-204ENST00000577498 BCAMP50895 628 aa18.27■□□□□ 0.52
IFT20-204ENST00000577498 C15orf52Q6ZUT6 534 aaKnown RBP18.27■□□□□ 0.52
IFT20-204ENST00000577498 FBXO33Q7Z6M2 555 aa18.27■□□□□ 0.52
IFT20-204ENST00000577498 SPATA5Q8NB90 893 aa18.27■□□□□ 0.52
IFT20-204ENST00000577498 MASTLQ96GX5 879 aa18.27■□□□□ 0.52
IFT20-204ENST00000577498 FAM227BQ96M60 508 aa18.27■□□□□ 0.52
IFT20-204ENST00000577498 IL25Q9H293 177 aa18.27■□□□□ 0.52
IFT20-204ENST00000577498 HELLSQ9NRZ9 838 aa18.27■□□□□ 0.52
IFT20-204ENST00000577498 HMG20BQ9P0W2 317 aa18.27■□□□□ 0.52
IFT20-204ENST00000577498 MED23Q9ULK4 1368 aa18.27■□□□□ 0.51
IFT20-204ENST00000577498 A0A0D9SFI3 127 aa18.26■□□□□ 0.51
IFT20-204ENST00000577498 SEMA3EO15041 775 aa18.26■□□□□ 0.51
IFT20-204ENST00000577498 RNF113AO15541 343 aaKnown RBP18.26■□□□□ 0.51
IFT20-204ENST00000577498 ZSCAN25Q6NSZ9 544 aa18.26■□□□□ 0.51
IFT20-204ENST00000577498 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.26■□□□□ 0.51
IFT20-204ENST00000577498 LSG1Q9H089 658 aaKnown RBP18.26■□□□□ 0.51
IFT20-204ENST00000577498 ANTXR1Q9H6X2 564 aa18.26■□□□□ 0.51
IFT20-204ENST00000577498 ANKIB1Q9P2G1 1089 aa18.26■□□□□ 0.51
IFT20-204ENST00000577498 LRRC37AA6NMS7 1700 aa18.26■□□□□ 0.51
IFT20-204ENST00000577498 PPEF1O14829 653 aaPredicted RBP18.25■□□□□ 0.51
IFT20-204ENST00000577498 ATP2B4P23634 1241 aa18.25■□□□□ 0.51
IFT20-204ENST00000577498 ANAPC15P60006 121 aa18.25■□□□□ 0.51
IFT20-204ENST00000577498 RASGRF1Q13972 1273 aa18.25■□□□□ 0.51
IFT20-204ENST00000577498 ZMYM1Q5SVZ6 1142 aa18.25■□□□□ 0.51
IFT20-204ENST00000577498 STYK1Q6J9G0 422 aa18.25■□□□□ 0.51
IFT20-204ENST00000577498 SP8Q8IXZ3 490 aa18.25■□□□□ 0.51
IFT20-204ENST00000577498 IL17RAQ96F46 866 aa18.25■□□□□ 0.51
IFT20-204ENST00000577498 FAM84BQ96KN1 310 aaPredicted RBP18.25■□□□□ 0.51
IFT20-204ENST00000577498 KIF2CQ99661 725 aa18.25■□□□□ 0.51
IFT20-204ENST00000577498 PODXL2Q9NZ53 605 aa18.25■□□□□ 0.51
IFT20-204ENST00000577498 PDS5AQ29RF7 1337 aaKnown RBP18.24■□□□□ 0.51
IFT20-204ENST00000577498 IRS2Q9Y4H2 1338 aa18.24■□□□□ 0.51
IFT20-204ENST00000577498 CYP2E1P05181 493 aaPredicted RBP18.24■□□□□ 0.51
IFT20-204ENST00000577498 MCMDC2Q4G0Z9 681 aa18.24■□□□□ 0.51
IFT20-204ENST00000577498 PI16Q6UXB8 463 aa18.24■□□□□ 0.51
IFT20-204ENST00000577498 VPS37DQ86XT2 251 aa18.24■□□□□ 0.51
IFT20-204ENST00000577498 IL27Q8NEV9 243 aa18.24■□□□□ 0.51
IFT20-204ENST00000577498 DENND2AQ9ULE3 1009 aa18.24■□□□□ 0.51
IFT20-204ENST00000577498 ATP6V0A2Q9Y487 856 aa18.24■□□□□ 0.51
IFT20-204ENST00000577498 CCDC171Q6TFL3 1326 aa18.23■□□□□ 0.51
IFT20-204ENST00000577498 COL11A2P13942 1736 aaPredicted RBP18.23■□□□□ 0.51
IFT20-204ENST00000577498 H0YIN7 160 aa18.23■□□□□ 0.51
IFT20-204ENST00000577498 HSPA4P34932 840 aa18.23■□□□□ 0.51
IFT20-204ENST00000577498 GYG1P46976 350 aa18.23■□□□□ 0.51
IFT20-204ENST00000577498 GPSM2P81274 684 aa18.23■□□□□ 0.51
IFT20-204ENST00000577498 BECN1Q14457 450 aa18.23■□□□□ 0.51
IFT20-204ENST00000577498 C2CD5Q86YS7 1000 aa18.23■□□□□ 0.51
IFT20-204ENST00000577498 UPF1Q92900 1129 aaKnown RBP eCLIP18.23■□□□□ 0.51
IFT20-204ENST00000577498 C10orf71Q711Q0 1435 aa18.23■□□□□ 0.51
IFT20-204ENST00000577498 HIBADHP31937 336 aaKnown RBP18.22■□□□□ 0.51
IFT20-204ENST00000577498 RABEP1Q15276 862 aa18.22■□□□□ 0.51
IFT20-204ENST00000577498 PIH1D3Q9NQM4 214 aaKnown RBP18.22■□□□□ 0.51
IFT20-204ENST00000577498 GGA1Q9UJY5 639 aa18.22■□□□□ 0.51
IFT20-204ENST00000577498 WTIPA6NIX2 430 aaPredicted RBP18.21■□□□□ 0.51
IFT20-204ENST00000577498 UBE3CQ15386 1083 aa18.21■□□□□ 0.51
IFT20-204ENST00000577498 APPBP2Q92624 585 aa18.21■□□□□ 0.51
IFT20-204ENST00000577498 MAP4K1Q92918 833 aa18.21■□□□□ 0.51
IFT20-204ENST00000577498 PDGFDQ9GZP0 370 aaPredicted RBP18.21■□□□□ 0.51
IFT20-204ENST00000577498 MYH7P12883 1935 aa18.21■□□□□ 0.51
IFT20-204ENST00000577498 IGSF3O75054 1194 aa18.2■□□□□ 0.5
IFT20-204ENST00000577498 UFL1O94874 794 aa18.2■□□□□ 0.5
IFT20-204ENST00000577498 KLRK1P26718 216 aa18.2■□□□□ 0.5
IFT20-204ENST00000577498 ADD2P35612 726 aa18.2■□□□□ 0.5
IFT20-204ENST00000577498 PTH1RQ03431 593 aa18.2■□□□□ 0.5
IFT20-204ENST00000577498 MAP3K12Q12852 859 aa18.2■□□□□ 0.5
IFT20-204ENST00000577498 ZNF589Q86UQ0 364 aaPredicted RBP18.2■□□□□ 0.5
IFT20-204ENST00000577498 CNKSR1Q969H4 720 aa18.2■□□□□ 0.5
IFT20-204ENST00000577498 SNX21Q969T3 373 aa18.2■□□□□ 0.5
IFT20-204ENST00000577498 TMX4Q9H1E5 349 aaPredicted RBP18.2■□□□□ 0.5
IFT20-204ENST00000577498 NSFL1CQ9UNZ2 370 aaKnown RBP18.2■□□□□ 0.5
IFT20-204ENST00000577498 DOCK2Q92608 1830 aa18.2■□□□□ 0.5
IFT20-204ENST00000577498 LTBP1Q14766 1721 aa18.2■□□□□ 0.5
IFT20-204ENST00000577498 WASHC4Q2M389 1173 aa18.19■□□□□ 0.5
IFT20-204ENST00000577498 TMED8Q6PL24 325 aaPredicted RBP18.19■□□□□ 0.5
IFT20-204ENST00000577498 ZNF804AQ7Z570 1209 aa18.19■□□□□ 0.5
IFT20-204ENST00000577498 KCNB2Q92953 911 aa18.19■□□□□ 0.5
IFT20-204ENST00000577498 DAXXQ9UER7 740 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms