RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 EGFRP00533 1210 aa10.97□□□□□ -0.65
SMG6-210ENST00000572205 HSPA6P17066 643 aa10.97□□□□□ -0.65
SMG6-210ENST00000572205 EPS15P42566 896 aa10.97□□□□□ -0.65
SMG6-210ENST00000572205 CCT4P50991 539 aaKnown RBP10.97□□□□□ -0.65
SMG6-210ENST00000572205 WASHC4Q2M389 1173 aa10.97□□□□□ -0.65
SMG6-210ENST00000572205 ATF7IPQ6VMQ6 1270 aa10.97□□□□□ -0.65
SMG6-210ENST00000572205 C15orf52Q6ZUT6 534 aaKnown RBP10.97□□□□□ -0.65
SMG6-210ENST00000572205 JDP2Q8WYK2 163 aa10.97□□□□□ -0.65
SMG6-210ENST00000572205 GMLQ99445 158 aa10.97□□□□□ -0.65
SMG6-210ENST00000572205 API5Q9BZZ5 524 aaKnown RBP10.97□□□□□ -0.65
SMG6-210ENST00000572205 GPRC5DQ9NZD1 345 aa10.97□□□□□ -0.65
SMG6-210ENST00000572205 GGA1Q9UJY5 639 aa10.97□□□□□ -0.65
SMG6-210ENST00000572205 OTOFQ9HC10 1997 aa10.96□□□□□ -0.65
SMG6-210ENST00000572205 AKAP11Q9UKA4 1901 aa10.96□□□□□ -0.65
SMG6-210ENST00000572205 ANKRD18BA2A2Z9 1011 aa10.96□□□□□ -0.65
SMG6-210ENST00000572205 PSMD14O00487 310 aa10.96□□□□□ -0.65
SMG6-210ENST00000572205 RIMBP2O15034 1052 aa10.96□□□□□ -0.65
SMG6-210ENST00000572205 RAD17O75943 681 aa10.96□□□□□ -0.65
SMG6-210ENST00000572205 EPHX2P34913 555 aa10.96□□□□□ -0.65
SMG6-210ENST00000572205 GMPSP49915 693 aaPredicted RBP10.96□□□□□ -0.65
SMG6-210ENST00000572205 FSTL1Q12841 308 aa10.96□□□□□ -0.65
SMG6-210ENST00000572205 DOK7Q18PE1 504 aa10.96□□□□□ -0.65
SMG6-210ENST00000572205 DPY19L2Q6NUT2 758 aa10.96□□□□□ -0.65
SMG6-210ENST00000572205 KLHDC4Q8TBB5 520 aa10.96□□□□□ -0.65
SMG6-210ENST00000572205 C9orf78Q9NZ63 289 aaPredicted RBP10.96□□□□□ -0.65
SMG6-210ENST00000572205 RIPOR2Q9Y4F9 1068 aa10.96□□□□□ -0.65
SMG6-210ENST00000572205 MYO5AQ9Y4I1 1855 aaKnown RBP10.95□□□□□ -0.66
SMG6-210ENST00000572205 ZNF804BA4D1E1 1349 aa10.95□□□□□ -0.66
SMG6-210ENST00000572205 C6orf229H3BNL8 230 aa10.95□□□□□ -0.66
SMG6-210ENST00000572205 TAF5LO75529 589 aa10.95□□□□□ -0.66
SMG6-210ENST00000572205 ITGBL1O95965 494 aaPredicted RBP10.95□□□□□ -0.66
SMG6-210ENST00000572205 ATP2B4P23634 1241 aa10.95□□□□□ -0.66
SMG6-210ENST00000572205 IGHMBP2P38935 993 aaKnown RBP10.95□□□□□ -0.66
SMG6-210ENST00000572205 HIRAP54198 1017 aaPredicted RBP10.95□□□□□ -0.66
SMG6-210ENST00000572205 EIF6P56537 245 aaKnown RBP10.95□□□□□ -0.66
SMG6-210ENST00000572205 PTPN12Q05209 780 aaKnown RBP10.95□□□□□ -0.66
SMG6-210ENST00000572205 IFIT5Q13325 482 aaKnown RBP10.95□□□□□ -0.66
SMG6-210ENST00000572205 MTX1Q13505 466 aa10.95□□□□□ -0.66
SMG6-210ENST00000572205 LRRC24Q50LG9 513 aa10.95□□□□□ -0.66
SMG6-210ENST00000572205 CIAPIN1Q6FI81 312 aa10.95□□□□□ -0.66
SMG6-210ENST00000572205 TRPM4Q8TD43 1214 aa10.95□□□□□ -0.66
SMG6-210ENST00000572205 ANKIB1Q9P2G1 1089 aa10.95□□□□□ -0.66
SMG6-210ENST00000572205 HACL1Q9UJ83 578 aa10.95□□□□□ -0.66
SMG6-210ENST00000572205 MAST2Q6P0Q8 1798 aa10.95□□□□□ -0.66
SMG6-210ENST00000572205 IQCA1LA6NCM1 817 aa10.94□□□□□ -0.66
SMG6-210ENST00000572205 VIL1P09327 827 aaKnown RBP10.94□□□□□ -0.66
SMG6-210ENST00000572205 ATG9AQ7Z3C6 839 aa10.94□□□□□ -0.66
SMG6-210ENST00000572205 LDHDQ86WU2 507 aa10.94□□□□□ -0.66
SMG6-210ENST00000572205 TMEM57Q8N5G2 664 aa10.94□□□□□ -0.66
SMG6-210ENST00000572205 SMC1BQ8NDV3 1235 aa10.94□□□□□ -0.66
SMG6-210ENST00000572205 HELBQ8NG08 1087 aaPredicted RBP10.94□□□□□ -0.66
SMG6-210ENST00000572205 EYA3Q99504 573 aa10.94□□□□□ -0.66
SMG6-210ENST00000572205 LEMD3Q9Y2U8 911 aa10.94□□□□□ -0.66
SMG6-210ENST00000572205 LRRFIP2Q9Y608 721 aaKnown RBP10.94□□□□□ -0.66
SMG6-210ENST00000572205 GJA3Q9Y6H8 435 aa10.94□□□□□ -0.66
SMG6-210ENST00000572205 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.94□□□□□ -0.66
SMG6-210ENST00000572205 DOCK2Q92608 1830 aa10.93□□□□□ -0.66
SMG6-210ENST00000572205 FGFR2P21802 821 aa10.93□□□□□ -0.66
SMG6-210ENST00000572205 HTRA3P83110 453 aa10.93□□□□□ -0.66
SMG6-210ENST00000572205 DACT2Q5SW24 774 aa10.93□□□□□ -0.66
SMG6-210ENST00000572205 CERS5Q8N5B7 392 aa10.93□□□□□ -0.66
SMG6-210ENST00000572205 DNAJC5GQ8N7S2 189 aa10.93□□□□□ -0.66
SMG6-210ENST00000572205 PGAP2Q9UHJ9 254 aa10.93□□□□□ -0.66
SMG6-210ENST00000572205 CDK5RAP2Q96SN8 1893 aa10.93□□□□□ -0.66
SMG6-210ENST00000572205 ZNF280AP59817 542 aaPredicted RBP10.92□□□□□ -0.66
SMG6-210ENST00000572205 CHADLQ6NUI6 762 aa10.92□□□□□ -0.66
SMG6-210ENST00000572205 DPF2Q92785 391 aa10.92□□□□□ -0.66
SMG6-210ENST00000572205 CLUAP1Q96AJ1 413 aa10.92□□□□□ -0.66
SMG6-210ENST00000572205 MPHOSPH8Q99549 860 aa10.92□□□□□ -0.66
SMG6-210ENST00000572205 MXD3Q9BW11 206 aa10.92□□□□□ -0.66
SMG6-210ENST00000572205 ANKRD2Q9GZV1 360 aa10.92□□□□□ -0.66
SMG6-210ENST00000572205 CHMP3Q9Y3E7 222 aa10.92□□□□□ -0.66
SMG6-210ENST00000572205 ASTN2O75129 1339 aaPredicted RBP10.91□□□□□ -0.66
SMG6-210ENST00000572205 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.91□□□□□ -0.66
SMG6-210ENST00000572205 UBTFL1P0CB47 393 aaPredicted RBP10.91□□□□□ -0.66
SMG6-210ENST00000572205 IL1R1P14778 569 aa10.91□□□□□ -0.66
SMG6-210ENST00000572205 FMR1Q06787 632 aaKnown RBP eCLIP10.91□□□□□ -0.66
SMG6-210ENST00000572205 CCDC57Q2TAC2 916 aa10.91□□□□□ -0.66
SMG6-210ENST00000572205 ZKSCAN2Q63HK3 967 aa10.91□□□□□ -0.66
SMG6-210ENST00000572205 RSBN1LQ6PCB5 846 aaPredicted RBP10.91□□□□□ -0.66
SMG6-210ENST00000572205 LDHAL6AQ6ZMR3 332 aa10.91□□□□□ -0.66
SMG6-210ENST00000572205 PODNQ7Z5L7 613 aa10.91□□□□□ -0.66
SMG6-210ENST00000572205 MICALL2Q8IY33 904 aa10.91□□□□□ -0.66
SMG6-210ENST00000572205 ZFP91Q96JP5 570 aaPredicted RBP10.91□□□□□ -0.66
SMG6-210ENST00000572205 ZC3H12CQ9C0D7 883 aaKnown RBP10.91□□□□□ -0.66
SMG6-210ENST00000572205 TMX4Q9H1E5 349 aaPredicted RBP10.91□□□□□ -0.66
SMG6-210ENST00000572205 ADARB2Q9NS39 739 aaKnown RBP10.91□□□□□ -0.66
SMG6-210ENST00000572205 SSC5DA1L4H1 1573 aa10.9□□□□□ -0.66
SMG6-210ENST00000572205 AOX1Q06278 1338 aa10.9□□□□□ -0.66
SMG6-210ENST00000572205 MROH5Q6ZUA9 1318 aa10.9□□□□□ -0.66
SMG6-210ENST00000572205 PNMA6EA0A0J9YXQ4 647 aa10.9□□□□□ -0.66
SMG6-210ENST00000572205 RPS12P25398 132 aaKnown RBP10.9□□□□□ -0.66
SMG6-210ENST00000572205 MNX1P50219 401 aaPredicted RBP10.9□□□□□ -0.66
SMG6-210ENST00000572205 TNIP1Q15025 636 aa10.9□□□□□ -0.66
SMG6-210ENST00000572205 TMEM132AQ24JP5 1023 aa10.9□□□□□ -0.66
SMG6-210ENST00000572205 MAP1SQ66K74 1059 aaPredicted RBP10.9□□□□□ -0.66
SMG6-210ENST00000572205 USP50Q70EL3 339 aaPredicted RBP10.9□□□□□ -0.66
SMG6-210ENST00000572205 FRAT1Q92837 279 aaPredicted RBP10.9□□□□□ -0.66
SMG6-210ENST00000572205 FAM212AQ96EL1 285 aa10.9□□□□□ -0.66
SMG6-210ENST00000572205 ZBED3Q96IU2 234 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms