RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 KSR2Q6VAB6 950 aa17.33■□□□□ 0.36
RPAIN-209ENST00000571558 PI4KAP1Q8N8J0 262 aa17.33■□□□□ 0.36
RPAIN-209ENST00000571558 ZC3H12CQ9C0D7 883 aaKnown RBP17.33■□□□□ 0.36
RPAIN-209ENST00000571558 GGA3Q9NZ52 723 aa17.33■□□□□ 0.36
RPAIN-209ENST00000571558 AKAP11Q9UKA4 1901 aa17.33■□□□□ 0.36
RPAIN-209ENST00000571558 RTL9Q8NET4 1388 aa17.32■□□□□ 0.36
RPAIN-209ENST00000571558 F6X3S4 739 aa17.32■□□□□ 0.36
RPAIN-209ENST00000571558 RIMBP2O15034 1052 aa17.32■□□□□ 0.36
RPAIN-209ENST00000571558 AIMP1Q12904 312 aaKnown RBP17.32■□□□□ 0.36
RPAIN-209ENST00000571558 AGBL3Q8NEM8 1001 aa17.32■□□□□ 0.36
RPAIN-209ENST00000571558 CDCA5Q96FF9 252 aa17.32■□□□□ 0.36
RPAIN-209ENST00000571558 HPS5Q9UPZ3 1129 aa17.32■□□□□ 0.36
RPAIN-209ENST00000571558 DDX58O95786 925 aaKnown RBP17.31■□□□□ 0.36
RPAIN-209ENST00000571558 ZNF280AP59817 542 aaPredicted RBP17.31■□□□□ 0.36
RPAIN-209ENST00000571558 INTS3Q68E01 1043 aaKnown RBP17.31■□□□□ 0.36
RPAIN-209ENST00000571558 FTSJ3Q8IY81 847 aaKnown RBP17.31■□□□□ 0.36
RPAIN-209ENST00000571558 TMEM57Q8N5G2 664 aa17.31■□□□□ 0.36
RPAIN-209ENST00000571558 TBC1D16Q8TBP0 767 aa17.31■□□□□ 0.36
RPAIN-209ENST00000571558 CELF1Q92879 486 aaKnown RBP17.31■□□□□ 0.36
RPAIN-209ENST00000571558 GCC1Q96CN9 775 aa17.31■□□□□ 0.36
RPAIN-209ENST00000571558 PODXL2Q9NZ53 605 aa17.31■□□□□ 0.36
RPAIN-209ENST00000571558 PITPNM2Q9BZ72 1349 aa17.31■□□□□ 0.36
RPAIN-209ENST00000571558 HSP90B1P14625 803 aaKnown RBP17.3■□□□□ 0.36
RPAIN-209ENST00000571558 RPS8P62241 208 aaKnown RBP17.3■□□□□ 0.36
RPAIN-209ENST00000571558 GPSM2P81274 684 aa17.3■□□□□ 0.36
RPAIN-209ENST00000571558 ANKRD13DQ6ZTN6 518 aa17.3■□□□□ 0.36
RPAIN-209ENST00000571558 RASAL3Q86YV0 1011 aa17.3■□□□□ 0.36
RPAIN-209ENST00000571558 PLBD2Q8NHP8 589 aa17.3■□□□□ 0.36
RPAIN-209ENST00000571558 HDAC9Q9UKV0 1011 aa17.3■□□□□ 0.36
RPAIN-209ENST00000571558 DDX60Q8IY21 1712 aaKnown RBP17.3■□□□□ 0.36
RPAIN-209ENST00000571558 TRIM28Q13263 835 aaKnown RBP17.3■□□□□ 0.36
RPAIN-209ENST00000571558 DOK7Q18PE1 504 aa17.3■□□□□ 0.36
RPAIN-209ENST00000571558 DNAAF4Q8WXU2 420 aa17.3■□□□□ 0.36
RPAIN-209ENST00000571558 CRBNQ96SW2 442 aa17.3■□□□□ 0.36
RPAIN-209ENST00000571558 KCNQ5Q9NR82 932 aa17.3■□□□□ 0.36
RPAIN-209ENST00000571558 MAP3K2Q9Y2U5 619 aa17.3■□□□□ 0.36
RPAIN-209ENST00000571558 COG6Q9Y2V7 657 aa17.3■□□□□ 0.36
RPAIN-209ENST00000571558 G3V3G9 751 aa17.29■□□□□ 0.36
RPAIN-209ENST00000571558 NEFLP07196 543 aa17.29■□□□□ 0.36
RPAIN-209ENST00000571558 MVPQ14764 893 aaKnown RBP17.29■□□□□ 0.36
RPAIN-209ENST00000571558 DCAF8Q5TAQ9 597 aa17.29■□□□□ 0.36
RPAIN-209ENST00000571558 ISCA1Q9BUE6 129 aa17.29■□□□□ 0.36
RPAIN-209ENST00000571558 POLR2AP24928 1970 aaKnown RBP17.28■□□□□ 0.36
RPAIN-209ENST00000571558 SCARF1Q14162 830 aa17.28■□□□□ 0.36
RPAIN-209ENST00000571558 BEND3Q5T5X7 828 aa17.28■□□□□ 0.36
RPAIN-209ENST00000571558 ANGEL2Q5VTE6 544 aaKnown RBP17.28■□□□□ 0.36
RPAIN-209ENST00000571558 RIC3Q7Z5B4 369 aa17.28■□□□□ 0.36
RPAIN-209ENST00000571558 FAM89AQ96GI7 184 aa17.28■□□□□ 0.36
RPAIN-209ENST00000571558 TM4SF4P48230 202 aa17.27■□□□□ 0.35
RPAIN-209ENST00000571558 CCT4P50991 539 aaKnown RBP17.27■□□□□ 0.35
RPAIN-209ENST00000571558 RSBN1LQ6PCB5 846 aaPredicted RBP17.27■□□□□ 0.35
RPAIN-209ENST00000571558 SLC4A10Q6U841 1118 aa17.27■□□□□ 0.35
RPAIN-209ENST00000571558 EXOC6Q8TAG9 804 aa17.27■□□□□ 0.35
RPAIN-209ENST00000571558 ZNF296Q8WUU4 475 aaPredicted RBP17.27■□□□□ 0.35
RPAIN-209ENST00000571558 METTL22Q9BUU2 404 aaPredicted RBP17.27■□□□□ 0.35
RPAIN-209ENST00000571558 PAPPA2Q9BXP8 1791 aa17.26■□□□□ 0.35
RPAIN-209ENST00000571558 USP17L8P0C7I0 530 aa17.26■□□□□ 0.35
RPAIN-209ENST00000571558 FBXO46Q6PJ61 603 aaPredicted RBP17.26■□□□□ 0.35
RPAIN-209ENST00000571558 CFHR5Q9BXR6 569 aa17.26■□□□□ 0.35
RPAIN-209ENST00000571558 TAF1P21675 1872 aa17.25■□□□□ 0.35
RPAIN-209ENST00000571558 IRS4O14654 1257 aaPredicted RBP17.25■□□□□ 0.35
RPAIN-209ENST00000571558 MMP14P50281 582 aa17.25■□□□□ 0.35
RPAIN-209ENST00000571558 PODNQ7Z5L7 613 aa17.25■□□□□ 0.35
RPAIN-209ENST00000571558 ITPRIPQ8IWB1 547 aa17.25■□□□□ 0.35
RPAIN-209ENST00000571558 LINS1Q8NG48 757 aa17.25■□□□□ 0.35
RPAIN-209ENST00000571558 GMLQ99445 158 aa17.25■□□□□ 0.35
RPAIN-209ENST00000571558 MYOZ2Q9NPC6 264 aa17.25■□□□□ 0.35
RPAIN-209ENST00000571558 ANKIB1Q9P2G1 1089 aa17.25■□□□□ 0.35
RPAIN-209ENST00000571558 GGA1Q9UJY5 639 aa17.25■□□□□ 0.35
RPAIN-209ENST00000571558 ASTN2O75129 1339 aaPredicted RBP17.25■□□□□ 0.35
RPAIN-209ENST00000571558 GPR25O00155 361 aa17.24■□□□□ 0.35
RPAIN-209ENST00000571558 ZBTB7BO15156 539 aaPredicted RBP17.24■□□□□ 0.35
RPAIN-209ENST00000571558 UFL1O94874 794 aa17.24■□□□□ 0.35
RPAIN-209ENST00000571558 IGKV5-2P06315 115 aa17.24■□□□□ 0.35
RPAIN-209ENST00000571558 DDX19BQ9UMR2 479 aa17.24■□□□□ 0.35
RPAIN-209ENST00000571558 SREBF2Q12772 1141 aa17.23■□□□□ 0.35
RPAIN-209ENST00000571558 ERICH6BQ5W0A0 696 aa17.23■□□□□ 0.35
RPAIN-209ENST00000571558 SRCIN1Q9C0H9 1055 aa17.23■□□□□ 0.35
RPAIN-209ENST00000571558 ALDH1L1O75891 902 aa17.22■□□□□ 0.35
RPAIN-209ENST00000571558 TBC1D8O95759 1140 aa17.22■□□□□ 0.35
RPAIN-209ENST00000571558 NF2P35240 595 aa17.22■□□□□ 0.35
RPAIN-209ENST00000571558 MYD88Q99836 296 aa17.22■□□□□ 0.35
RPAIN-209ENST00000571558 USP17L3A6NCW0 530 aa17.21■□□□□ 0.35
RPAIN-209ENST00000571558 USP17L4A6NCW7 530 aa17.21■□□□□ 0.35
RPAIN-209ENST00000571558 NEURL1BA8MQ27 555 aa17.21■□□□□ 0.35
RPAIN-209ENST00000571558 ATP5J2-PTCD1G3V325 749 aa17.21■□□□□ 0.35
RPAIN-209ENST00000571558 CWF19L2Q2TBE0 894 aaKnown RBP17.21■□□□□ 0.35
RPAIN-209ENST00000571558 USP17L1Q7RTZ2 530 aa17.21■□□□□ 0.35
RPAIN-209ENST00000571558 ZBTB38Q8NAP3 1195 aaPredicted RBP17.21■□□□□ 0.35
RPAIN-209ENST00000571558 ZBTB40Q9NUA8 1239 aa17.21■□□□□ 0.35
RPAIN-209ENST00000571558 SCN9AQ15858 1988 aa17.21■□□□□ 0.35
RPAIN-209ENST00000571558 UBE2Q2LH0YL09 131 aa17.21■□□□□ 0.34
RPAIN-209ENST00000571558 FKTNO75072 461 aa17.21■□□□□ 0.34
RPAIN-209ENST00000571558 ALDH1A1P00352 501 aa17.21■□□□□ 0.34
RPAIN-209ENST00000571558 NEXNQ0ZGT2 675 aa17.21■□□□□ 0.34
RPAIN-209ENST00000571558 CCDC152Q4G0S7 254 aa17.21■□□□□ 0.34
RPAIN-209ENST00000571558 USP44Q9H0E7 712 aa17.21■□□□□ 0.34
RPAIN-209ENST00000571558 GTF3C3Q9Y5Q9 886 aa17.21■□□□□ 0.34
RPAIN-209ENST00000571558 XDHP47989 1333 aa17.2■□□□□ 0.34
RPAIN-209ENST00000571558 AAMPQ13685 434 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 155.9 ms