RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 TRAF5O00463 557 aa19.82■□□□□ 0.76
USB1-215ENST00000569252 CIAO1O76071 339 aa19.82■□□□□ 0.76
USB1-215ENST00000569252 KCNJ4P48050 445 aa19.82■□□□□ 0.76
USB1-215ENST00000569252 METTL24Q5JXM2 366 aa19.82■□□□□ 0.76
USB1-215ENST00000569252 AIDAQ96BJ3 306 aa19.82■□□□□ 0.76
USB1-215ENST00000569252 WBP1LQ9NX94 342 aa19.82■□□□□ 0.76
USB1-215ENST00000569252 MINPP1Q9UNW1 487 aa19.82■□□□□ 0.76
USB1-215ENST00000569252 NSFL1CQ9UNZ2 370 aaKnown RBP19.82■□□□□ 0.76
USB1-215ENST00000569252 PA2G4Q9UQ80 394 aaKnown RBP19.82■□□□□ 0.76
USB1-215ENST00000569252 HSPA8P11142 646 aaKnown RBP19.81■□□□□ 0.76
USB1-215ENST00000569252 EPS15P42566 896 aa19.81■□□□□ 0.76
USB1-215ENST00000569252 CTCFP49711 727 aaPredicted RBP19.81■□□□□ 0.76
USB1-215ENST00000569252 DPP8Q6V1X1 898 aaPredicted RBP19.81■□□□□ 0.76
USB1-215ENST00000569252 ERC1Q8IUD2 1116 aa19.81■□□□□ 0.76
USB1-215ENST00000569252 MPNDQ8N594 471 aa19.81■□□□□ 0.76
USB1-215ENST00000569252 CEP126Q9P2H0 1117 aa19.81■□□□□ 0.76
USB1-215ENST00000569252 ABT1Q9ULW3 272 aaKnown RBP19.81■□□□□ 0.76
USB1-215ENST00000569252 SIRT2Q8IXJ6 389 aa19.8■□□□□ 0.76
USB1-215ENST00000569252 SUPT20HQ8NEM7 779 aa19.8■□□□□ 0.76
USB1-215ENST00000569252 TSKSQ9UJT2 592 aa19.8■□□□□ 0.76
USB1-215ENST00000569252 RIPOR2Q9Y4F9 1068 aa19.8■□□□□ 0.76
USB1-215ENST00000569252 RAB11FIP3O75154 756 aa19.79■□□□□ 0.76
USB1-215ENST00000569252 SCNN1DP51172 638 aa19.79■□□□□ 0.76
USB1-215ENST00000569252 CHRNDQ07001 517 aa19.79■□□□□ 0.76
USB1-215ENST00000569252 HDAC1Q13547 482 aaPredicted RBP19.79■□□□□ 0.76
USB1-215ENST00000569252 DEFB115Q30KQ5 88 aa19.79■□□□□ 0.76
USB1-215ENST00000569252 LRRC24Q50LG9 513 aa19.79■□□□□ 0.76
USB1-215ENST00000569252 PAXIP1Q6ZW49 1069 aaPredicted RBP19.79■□□□□ 0.76
USB1-215ENST00000569252 PUS3Q9BZE2 481 aaKnown RBP19.79■□□□□ 0.76
USB1-215ENST00000569252 PRDM10Q9NQV6 1147 aa19.79■□□□□ 0.76
USB1-215ENST00000569252 NOP58Q9Y2X3 529 aaKnown RBP19.79■□□□□ 0.76
USB1-215ENST00000569252 WDR33Q9C0J8 1336 aaKnown RBP19.78■□□□□ 0.76
USB1-215ENST00000569252 RASSF10A6NK89 507 aa19.78■□□□□ 0.76
USB1-215ENST00000569252 C6orf229H3BNL8 230 aa19.78■□□□□ 0.76
USB1-215ENST00000569252 ATP2B4P23634 1241 aa19.78■□□□□ 0.76
USB1-215ENST00000569252 GPC2Q8N158 579 aa19.78■□□□□ 0.76
USB1-215ENST00000569252 GGA1Q9UJY5 639 aa19.78■□□□□ 0.76
USB1-215ENST00000569252 AKAP2Q9Y2D5 859 aa19.78■□□□□ 0.76
USB1-215ENST00000569252 LEMD3Q9Y2U8 911 aa19.78■□□□□ 0.76
USB1-215ENST00000569252 XDHP47989 1333 aa19.77■□□□□ 0.76
USB1-215ENST00000569252 GPSM2P81274 684 aa19.77■□□□□ 0.76
USB1-215ENST00000569252 CYP4F22Q6NT55 531 aa19.77■□□□□ 0.76
USB1-215ENST00000569252 GCC1Q96CN9 775 aa19.77■□□□□ 0.76
USB1-215ENST00000569252 EYA3Q99504 573 aa19.77■□□□□ 0.76
USB1-215ENST00000569252 EXOC6BQ9Y2D4 811 aa19.77■□□□□ 0.76
USB1-215ENST00000569252 G3V3G9 751 aa19.76■□□□□ 0.75
USB1-215ENST00000569252 APBB1O00213 710 aa19.76■□□□□ 0.75
USB1-215ENST00000569252 PDE8BO95263 885 aa19.76■□□□□ 0.75
USB1-215ENST00000569252 DCAF8Q5TAQ9 597 aa19.76■□□□□ 0.75
USB1-215ENST00000569252 LARGE2Q8N3Y3 721 aa19.76■□□□□ 0.75
USB1-215ENST00000569252 HELBQ8NG08 1087 aaPredicted RBP19.76■□□□□ 0.75
USB1-215ENST00000569252 JDP2Q8WYK2 163 aa19.76■□□□□ 0.75
USB1-215ENST00000569252 CCDC136Q96JN2 1154 aa19.76■□□□□ 0.75
USB1-215ENST00000569252 PSMD1Q99460 953 aa19.76■□□□□ 0.75
USB1-215ENST00000569252 DCTPP1Q9H773 170 aa19.76■□□□□ 0.75
USB1-215ENST00000569252 TAF5LO75529 589 aa19.75■□□□□ 0.75
USB1-215ENST00000569252 UFL1O94874 794 aa19.75■□□□□ 0.75
USB1-215ENST00000569252 EIF6P56537 245 aaKnown RBP19.75■□□□□ 0.75
USB1-215ENST00000569252 AOC3Q16853 763 aa19.75■□□□□ 0.75
USB1-215ENST00000569252 ATG9AQ7Z3C6 839 aa19.75■□□□□ 0.75
USB1-215ENST00000569252 PNMA8AQ86V59 439 aaPredicted RBP19.75■□□□□ 0.75
USB1-215ENST00000569252 KIF1BPQ96EK5 621 aa19.75■□□□□ 0.75
USB1-215ENST00000569252 ZC3H12CQ9C0D7 883 aaKnown RBP19.75■□□□□ 0.75
USB1-215ENST00000569252 PODXL2Q9NZ53 605 aa19.75■□□□□ 0.75
USB1-215ENST00000569252 AOC2O75106 756 aa19.74■□□□□ 0.75
USB1-215ENST00000569252 CST9Q5W186 159 aa19.74■□□□□ 0.75
USB1-215ENST00000569252 ABHD8Q96I13 439 aa19.74■□□□□ 0.75
USB1-215ENST00000569252 BCL11AQ9H165 835 aa19.74■□□□□ 0.75
USB1-215ENST00000569252 ZNF804BA4D1E1 1349 aa19.74■□□□□ 0.75
USB1-215ENST00000569252 SHTN1A0MZ66 631 aa19.73■□□□□ 0.75
USB1-215ENST00000569252 IFIT1P09914 478 aaKnown RBP19.73■□□□□ 0.75
USB1-215ENST00000569252 TFCP2Q12800 502 aa19.73■□□□□ 0.75
USB1-215ENST00000569252 UBE4AQ14139 1066 aa19.73■□□□□ 0.75
USB1-215ENST00000569252 PUM3Q15397 648 aaKnown RBP19.73■□□□□ 0.75
USB1-215ENST00000569252 WASHC4Q2M389 1173 aa19.73■□□□□ 0.75
USB1-215ENST00000569252 DLK2Q6UY11 383 aa19.73■□□□□ 0.75
USB1-215ENST00000569252 TBC1D16Q8TBP0 767 aa19.73■□□□□ 0.75
USB1-215ENST00000569252 CAPNS2Q96L46 248 aa19.73■□□□□ 0.75
USB1-215ENST00000569252 LRRCC1Q9C099 1032 aa19.73■□□□□ 0.75
USB1-215ENST00000569252 PPP4R2Q9NY27 417 aa19.73■□□□□ 0.75
USB1-215ENST00000569252 TAF1P21675 1872 aa19.73■□□□□ 0.75
USB1-215ENST00000569252 SLC5A1P13866 664 aa19.72■□□□□ 0.75
USB1-215ENST00000569252 LMOD1P29536 600 aaPredicted RBP19.72■□□□□ 0.75
USB1-215ENST00000569252 CLASRPQ8N2M8 674 aaKnown RBP19.72■□□□□ 0.75
USB1-215ENST00000569252 NEUROD6Q96NK8 337 aa19.72■□□□□ 0.75
USB1-215ENST00000569252 VPS33BQ9H267 617 aa19.72■□□□□ 0.75
USB1-215ENST00000569252 PPIP5K2O43314 1243 aa19.71■□□□□ 0.75
USB1-215ENST00000569252 ATP2B3Q16720 1220 aa19.71■□□□□ 0.75
USB1-215ENST00000569252 CAVIN4Q5BKX8 364 aa19.71■□□□□ 0.75
USB1-215ENST00000569252 GORABQ5T7V8 394 aa19.71■□□□□ 0.75
USB1-215ENST00000569252 VPS37DQ86XT2 251 aa19.71■□□□□ 0.75
USB1-215ENST00000569252 RHPN1Q8TCX5 695 aa19.71■□□□□ 0.75
USB1-215ENST00000569252 LPIN2Q92539 896 aa19.71■□□□□ 0.75
USB1-215ENST00000569252 THSD7BQ9C0I4 1608 aa19.71■□□□□ 0.75
USB1-215ENST00000569252 TRPM7Q96QT4 1865 aa19.71■□□□□ 0.75
USB1-215ENST00000569252 SASH1O94885 1247 aa19.7■□□□□ 0.74
USB1-215ENST00000569252 IGHDP01880 384 aa19.7■□□□□ 0.74
USB1-215ENST00000569252 ANKRD45Q5TZF3 282 aa19.7■□□□□ 0.74
USB1-215ENST00000569252 RTFDC1Q9BY42 306 aaPredicted RBP19.7■□□□□ 0.74
USB1-215ENST00000569252 GLIS2Q9BZE0 524 aaPredicted RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms