RNA–Protein interactions for RNA: ENST00000568814.1

HERPUD1-216, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, human

TSL 2

Gene HERPUD1, Length 509 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERPUD1-216	ENST00000568814	VPS33B	Q9H267	617 aa		12.56	□□□□□ -0.4
HERPUD1-216	ENST00000568814	TAOK3	Q9H2K8	898 aa		12.56	□□□□□ -0.4
HERPUD1-216	ENST00000568814	FPGT-TNNI3K	V9GXZ4	949 aa		12.56	□□□□□ -0.4
HERPUD1-216	ENST00000568814		A0A1B0GUL7	405 aa		12.55	□□□□□ -0.4
HERPUD1-216	ENST00000568814	GRIN3B	O60391	1043 aa		12.55	□□□□□ -0.4
HERPUD1-216	ENST00000568814	IFIT2	P09913	472 aa	Known RBP	12.55	□□□□□ -0.4
HERPUD1-216	ENST00000568814	HSPA6	P17066	643 aa		12.55	□□□□□ -0.4
HERPUD1-216	ENST00000568814	AACS	Q86V21	672 aa		12.55	□□□□□ -0.4
HERPUD1-216	ENST00000568814	CHD1L	Q86WJ1	897 aa		12.55	□□□□□ -0.4
HERPUD1-216	ENST00000568814	IL1RAPL2	Q9NP60	686 aa		12.55	□□□□□ -0.4
HERPUD1-216	ENST00000568814	CAVIN4	Q5BKX8	364 aa		12.54	□□□□□ -0.4
HERPUD1-216	ENST00000568814	SLC51A	Q86UW1	340 aa		12.54	□□□□□ -0.4
HERPUD1-216	ENST00000568814	EAF2	Q96CJ1	260 aa	Predicted RBP	12.54	□□□□□ -0.4
HERPUD1-216	ENST00000568814	GPATCH3	Q96I76	525 aa		12.54	□□□□□ -0.4
HERPUD1-216	ENST00000568814	NEUROD6	Q96NK8	337 aa		12.54	□□□□□ -0.4
HERPUD1-216	ENST00000568814	POLL	Q9UGP5	575 aa		12.54	□□□□□ -0.4
HERPUD1-216	ENST00000568814	SMARCA5	O60264	1052 aa	Predicted RBP	12.53	□□□□□ -0.4
HERPUD1-216	ENST00000568814	YBX3	P16989	372 aa	Known RBP eCLIP	12.53	□□□□□ -0.4
HERPUD1-216	ENST00000568814	KIAA2012	Q0VF49	1180 aa		12.53	□□□□□ -0.4
HERPUD1-216	ENST00000568814	WASHC4	Q2M389	1173 aa		12.53	□□□□□ -0.4
HERPUD1-216	ENST00000568814	GORAB	Q5T7V8	394 aa		12.53	□□□□□ -0.4
HERPUD1-216	ENST00000568814	ZNF804A	Q7Z570	1209 aa		12.53	□□□□□ -0.4
HERPUD1-216	ENST00000568814	ZC3H12C	Q9C0D7	883 aa	Known RBP	12.53	□□□□□ -0.4
HERPUD1-216	ENST00000568814	NFKBIE	O00221	500 aa		12.52	□□□□□ -0.41
HERPUD1-216	ENST00000568814	PPIP5K2	O43314	1243 aa		12.52	□□□□□ -0.41
HERPUD1-216	ENST00000568814	TIMM10	P62072	90 aa		12.52	□□□□□ -0.41
HERPUD1-216	ENST00000568814	CCDC158	Q5M9N0	1113 aa		12.52	□□□□□ -0.41
HERPUD1-216	ENST00000568814	ARHGAP27	Q6ZUM4	889 aa		12.52	□□□□□ -0.41
HERPUD1-216	ENST00000568814	VPS37D	Q86XT2	251 aa		12.52	□□□□□ -0.41
HERPUD1-216	ENST00000568814	XAGE2	Q96GT9	111 aa		12.52	□□□□□ -0.41
HERPUD1-216	ENST00000568814	LNPK	Q9C0E8	428 aa		12.52	□□□□□ -0.41
HERPUD1-216	ENST00000568814	GNL3L	Q9NVN8	582 aa	Known RBP	12.52	□□□□□ -0.41
HERPUD1-216	ENST00000568814	DBNL	Q9UJU6	430 aa	Known RBP	12.52	□□□□□ -0.41
HERPUD1-216	ENST00000568814	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	12.52	□□□□□ -0.41
HERPUD1-216	ENST00000568814	IRS2	Q9Y4H2	1338 aa		12.52	□□□□□ -0.41
HERPUD1-216	ENST00000568814		G3V3G9	751 aa		12.51	□□□□□ -0.41
HERPUD1-216	ENST00000568814	SNAP23	O00161	211 aa		12.51	□□□□□ -0.41
HERPUD1-216	ENST00000568814	ZBTB22	O15209	634 aa		12.51	□□□□□ -0.41
HERPUD1-216	ENST00000568814	HIBADH	P31937	336 aa	Known RBP	12.51	□□□□□ -0.41
HERPUD1-216	ENST00000568814	IARS	P41252	1262 aa	Known RBP	12.51	□□□□□ -0.41
HERPUD1-216	ENST00000568814	DCAF8	Q5TAQ9	597 aa		12.51	□□□□□ -0.41
HERPUD1-216	ENST00000568814	ZNF526	Q8TF50	670 aa	Predicted RBP	12.51	□□□□□ -0.41
HERPUD1-216	ENST00000568814	DBNDD2	Q9BQY9	259 aa		12.51	□□□□□ -0.41
HERPUD1-216	ENST00000568814	COA1	Q9GZY4	146 aa		12.51	□□□□□ -0.41
HERPUD1-216	ENST00000568814	CCDC8	Q9H0W5	538 aa	Predicted RBP	12.51	□□□□□ -0.41
HERPUD1-216	ENST00000568814	SEMA3E	O15041	775 aa		12.5	□□□□□ -0.41
HERPUD1-216	ENST00000568814	UQCRFS1P1	P0C7P4	283 aa		12.5	□□□□□ -0.41
HERPUD1-216	ENST00000568814	MX1	P20591	662 aa		12.5	□□□□□ -0.41
HERPUD1-216	ENST00000568814	LMNB1	P20700	586 aa		12.5	□□□□□ -0.41
HERPUD1-216	ENST00000568814	KLRK1	P26718	216 aa		12.5	□□□□□ -0.41
HERPUD1-216	ENST00000568814	ADORA1	P30542	326 aa		12.5	□□□□□ -0.41
HERPUD1-216	ENST00000568814	AOC3	Q16853	763 aa		12.5	□□□□□ -0.41
HERPUD1-216	ENST00000568814	TTC39A	Q5SRH9	613 aa		12.5	□□□□□ -0.41
HERPUD1-216	ENST00000568814	CCDC102B	Q68D86	513 aa		12.5	□□□□□ -0.41
HERPUD1-216	ENST00000568814	FBXO33	Q7Z6M2	555 aa		12.5	□□□□□ -0.41
HERPUD1-216	ENST00000568814	LARGE2	Q8N3Y3	721 aa		12.5	□□□□□ -0.41
HERPUD1-216	ENST00000568814	ZNF512B	Q96KM6	892 aa	Predicted RBP	12.5	□□□□□ -0.41
HERPUD1-216	ENST00000568814	FAM84B	Q96KN1	310 aa	Predicted RBP	12.5	□□□□□ -0.41
HERPUD1-216	ENST00000568814	BCL11A	Q9H165	835 aa		12.5	□□□□□ -0.41
HERPUD1-216	ENST00000568814	ZNF277	Q9NRM2	450 aa	Predicted RBP	12.5	□□□□□ -0.41
HERPUD1-216	ENST00000568814	ECHDC1	Q9NTX5	307 aa		12.5	□□□□□ -0.41
HERPUD1-216	ENST00000568814	TLR7	Q9NYK1	1049 aa	Known RBP	12.5	□□□□□ -0.41
HERPUD1-216	ENST00000568814	AOX1	Q06278	1338 aa		12.5	□□□□□ -0.41
HERPUD1-216	ENST00000568814	TTC41P	Q6P2S7	1318 aa		12.5	□□□□□ -0.41
HERPUD1-216	ENST00000568814	GOLGB1	Q14789	3259 aa	Known RBP	12.49	□□□□□ -0.41
HERPUD1-216	ENST00000568814	PDS5A	Q29RF7	1337 aa	Known RBP	12.49	□□□□□ -0.41
HERPUD1-216	ENST00000568814	SALL3	Q9BXA9	1300 aa		12.49	□□□□□ -0.41
HERPUD1-216	ENST00000568814	WTIP	A6NIX2	430 aa	Predicted RBP	12.49	□□□□□ -0.41
HERPUD1-216	ENST00000568814	RIMBP2	O15034	1052 aa		12.49	□□□□□ -0.41
HERPUD1-216	ENST00000568814	ERC2	O15083	957 aa		12.49	□□□□□ -0.41
HERPUD1-216	ENST00000568814	ARID4A	P29374	1257 aa	Predicted RBP	12.49	□□□□□ -0.41
HERPUD1-216	ENST00000568814	GYG1	P46976	350 aa		12.49	□□□□□ -0.41
HERPUD1-216	ENST00000568814	RASSF7	Q02833	373 aa		12.49	□□□□□ -0.41
HERPUD1-216	ENST00000568814	PODN	Q7Z5L7	613 aa		12.49	□□□□□ -0.41
HERPUD1-216	ENST00000568814	TXNRD3	Q86VQ6	643 aa		12.49	□□□□□ -0.41
HERPUD1-216	ENST00000568814	NIM1K	Q8IY84	436 aa		12.49	□□□□□ -0.41
HERPUD1-216	ENST00000568814	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	12.49	□□□□□ -0.41
HERPUD1-216	ENST00000568814	JDP2	Q8WYK2	163 aa		12.49	□□□□□ -0.41
HERPUD1-216	ENST00000568814	GPR101	Q96P66	508 aa	Predicted RBP	12.49	□□□□□ -0.41
HERPUD1-216	ENST00000568814	STAP2	Q9UGK3	403 aa		12.49	□□□□□ -0.41
HERPUD1-216	ENST00000568814	FRAT2	O75474	233 aa	Predicted RBP	12.48	□□□□□ -0.41
HERPUD1-216	ENST00000568814	IL1R1	P14778	569 aa		12.48	□□□□□ -0.41
HERPUD1-216	ENST00000568814	ATP5J	P18859	108 aa		12.48	□□□□□ -0.41
HERPUD1-216	ENST00000568814	PHKA1	P46020	1223 aa		12.48	□□□□□ -0.41
HERPUD1-216	ENST00000568814	BCAM	P50895	628 aa		12.48	□□□□□ -0.41
HERPUD1-216	ENST00000568814	DICER1	Q9UPY3	1922 aa	Known RBP	12.47	□□□□□ -0.41
HERPUD1-216	ENST00000568814	ECE2	O60344	883 aa		12.47	□□□□□ -0.41
HERPUD1-216	ENST00000568814	GLRX3	O76003	335 aa	Known RBP	12.47	□□□□□ -0.41
HERPUD1-216	ENST00000568814	PDE1A	P54750	535 aa		12.47	□□□□□ -0.41
HERPUD1-216	ENST00000568814	COL13A1	Q5TAT6	717 aa	Predicted RBP	12.47	□□□□□ -0.41
HERPUD1-216	ENST00000568814	C16orf71	Q8IYS4	520 aa	Predicted RBP	12.47	□□□□□ -0.41
HERPUD1-216	ENST00000568814	TDRD7	Q8NHU6	1098 aa	Known RBP	12.47	□□□□□ -0.41
HERPUD1-216	ENST00000568814	OSBPL3	Q9H4L5	887 aa		12.47	□□□□□ -0.41
HERPUD1-216	ENST00000568814	CD209	Q9NNX6	404 aa		12.47	□□□□□ -0.41
HERPUD1-216	ENST00000568814	DENND2A	Q9ULE3	1009 aa		12.47	□□□□□ -0.41
HERPUD1-216	ENST00000568814	MYH13	Q9UKX3	1938 aa		12.47	□□□□□ -0.41
HERPUD1-216	ENST00000568814	SBF1	O95248	1867 aa		12.46	□□□□□ -0.41
HERPUD1-216	ENST00000568814	ZC3H4	Q9UPT8	1303 aa	Known RBP	12.46	□□□□□ -0.41
HERPUD1-216	ENST00000568814	PDE4A	P27815	886 aa		12.46	□□□□□ -0.41
HERPUD1-216	ENST00000568814	DOK7	Q18PE1	504 aa		12.46	□□□□□ -0.41

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