RNA–Protein interactions for RNA: ENST00000568454.5

TSC2-222, Transcript of TSC complex subunit 2, human

APPRIS ALT2 TSL 2 BASIC

Gene TSC2, Length 5,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TSC2-222	ENST00000568454	TRIM75P	A6NK02	468 aa		18.82	■□□□□ 0.6
TSC2-222	ENST00000568454	SETDB1	Q15047	1291 aa		18.82	■□□□□ 0.6
TSC2-222	ENST00000568454	GRIPAP1	Q4V328	841 aa		18.82	■□□□□ 0.6
TSC2-222	ENST00000568454	MPRIP	Q6WCQ1	1025 aa		18.82	■□□□□ 0.6
TSC2-222	ENST00000568454	BAG1	Q99933	345 aa	Predicted RBP	18.82	■□□□□ 0.6
TSC2-222	ENST00000568454	FAM135A	Q9P2D6	1515 aa		18.81	■□□□□ 0.6
TSC2-222	ENST00000568454	LRRC2	Q9BYS8	371 aa		18.81	■□□□□ 0.6
TSC2-222	ENST00000568454	TSGA10	Q9BZW7	698 aa		18.81	■□□□□ 0.6
TSC2-222	ENST00000568454	MMRN2	Q9H8L6	949 aa		18.81	■□□□□ 0.6
TSC2-222	ENST00000568454	ARHGEF11	O15085	1522 aa		18.81	■□□□□ 0.6
TSC2-222	ENST00000568454	TTC41P	Q6P2S7	1318 aa		18.81	■□□□□ 0.6
TSC2-222	ENST00000568454	LDHC	P07864	332 aa		18.81	■□□□□ 0.6
TSC2-222	ENST00000568454	USP37	Q86T82	979 aa		18.81	■□□□□ 0.6
TSC2-222	ENST00000568454	MTRF1L	Q9UGC7	380 aa	Known RBP	18.81	■□□□□ 0.6
TSC2-222	ENST00000568454	MYL5	Q02045	173 aa		18.81	■□□□□ 0.6
TSC2-222	ENST00000568454	MRPL50	Q8N5N7	158 aa	Known RBP	18.81	■□□□□ 0.6
TSC2-222	ENST00000568454	UTP14A	Q9BVJ6	771 aa	Known RBP	18.81	■□□□□ 0.6
TSC2-222	ENST00000568454	RIOK3	O14730	519 aa	Known RBP	18.81	■□□□□ 0.6
TSC2-222	ENST00000568454	LDHAL6A	Q6ZMR3	332 aa		18.81	■□□□□ 0.6
TSC2-222	ENST00000568454	ASIC1	P78348	528 aa		18.8	■□□□□ 0.6
TSC2-222	ENST00000568454	ZC3H6	P61129	1189 aa	Known RBP	18.8	■□□□□ 0.6
TSC2-222	ENST00000568454	DHX58	Q96C10	678 aa		18.8	■□□□□ 0.6
TSC2-222	ENST00000568454	DCTPP1	Q9H773	170 aa		18.8	■□□□□ 0.6
TSC2-222	ENST00000568454	LUC7L2	Q9Y383	392 aa	Known RBP	18.8	■□□□□ 0.6
TSC2-222	ENST00000568454	ZNF445	P59923	1031 aa		18.8	■□□□□ 0.6
TSC2-222	ENST00000568454	PPFIBP2	Q8ND30	876 aa		18.8	■□□□□ 0.6
TSC2-222	ENST00000568454	UBXN1	Q04323	297 aa		18.8	■□□□□ 0.6
TSC2-222	ENST00000568454	NAA25	Q14CX7	972 aa		18.8	■□□□□ 0.6
TSC2-222	ENST00000568454	DNAJC21	Q5F1R6	531 aa	Known RBP	18.8	■□□□□ 0.6
TSC2-222	ENST00000568454	UBE3B	Q7Z3V4	1068 aa		18.8	■□□□□ 0.6
TSC2-222	ENST00000568454	BIVM-ERCC5	R4GMW8	1640 aa		18.79	■□□□□ 0.6
TSC2-222	ENST00000568454	NUTM2A	Q8IVF1	878 aa	Predicted RBP	18.79	■□□□□ 0.6
TSC2-222	ENST00000568454	AKR1B15	C9JRZ8	316 aa	Predicted RBP	18.79	■□□□□ 0.6
TSC2-222	ENST00000568454	WAPL	Q7Z5K2	1190 aa		18.79	■□□□□ 0.6
TSC2-222	ENST00000568454	IFT81	Q8WYA0	676 aa		18.79	■□□□□ 0.6
TSC2-222	ENST00000568454	ESR2	Q92731	530 aa		18.79	■□□□□ 0.6
TSC2-222	ENST00000568454	SERPINA10	Q9UK55	444 aa		18.79	■□□□□ 0.6
TSC2-222	ENST00000568454	GNAQ	P50148	359 aa		18.79	■□□□□ 0.6
TSC2-222	ENST00000568454	USHBP1	Q8N6Y0	703 aa		18.79	■□□□□ 0.6
TSC2-222	ENST00000568454	IFT74	Q96LB3	600 aa		18.78	■□□□□ 0.6
TSC2-222	ENST00000568454	NEK11	Q8NG66	645 aa		18.78	■□□□□ 0.6
TSC2-222	ENST00000568454	ALDH1L1	O75891	902 aa		18.78	■□□□□ 0.6
TSC2-222	ENST00000568454	HMGB2	P26583	209 aa	Known RBP	18.78	■□□□□ 0.6
TSC2-222	ENST00000568454	USP26	Q9BXU7	913 aa		18.78	■□□□□ 0.6
TSC2-222	ENST00000568454	BAG3	O95817	575 aa		18.78	■□□□□ 0.6
TSC2-222	ENST00000568454	MAP3K9	P80192	1104 aa		18.78	■□□□□ 0.6
TSC2-222	ENST00000568454	KIF14	Q15058	1648 aa		18.78	■□□□□ 0.6
TSC2-222	ENST00000568454	RAD50	Q92878	1312 aa		18.78	■□□□□ 0.6
TSC2-222	ENST00000568454	FAM160A1	Q05DH4	1040 aa		18.77	■□□□□ 0.6
TSC2-222	ENST00000568454	ANKIB1	Q9P2G1	1089 aa		18.77	■□□□□ 0.6
TSC2-222	ENST00000568454	CPSF2	Q9P2I0	782 aa	Known RBP	18.77	■□□□□ 0.6
TSC2-222	ENST00000568454	COMMD10	Q9Y6G5	202 aa		18.77	■□□□□ 0.6
TSC2-222	ENST00000568454	ASXL1	Q8IXJ9	1541 aa		18.77	■□□□□ 0.6
TSC2-222	ENST00000568454	AEBP2	Q6ZN18	517 aa	Predicted RBP	18.77	■□□□□ 0.6
TSC2-222	ENST00000568454	VAT1L	Q9HCJ6	419 aa		18.77	■□□□□ 0.6
TSC2-222	ENST00000568454	FAM83G	A6ND36	823 aa		18.77	■□□□□ 0.59
TSC2-222	ENST00000568454	WASL	O00401	505 aa	Predicted RBP	18.77	■□□□□ 0.59
TSC2-222	ENST00000568454	NMI	Q13287	307 aa	Predicted RBP	18.77	■□□□□ 0.59
TSC2-222	ENST00000568454	WDR66	Q8TBY9	1149 aa		18.77	■□□□□ 0.59
TSC2-222	ENST00000568454	INPP5B	P32019	993 aa		18.76	■□□□□ 0.59
TSC2-222	ENST00000568454	NAPG	Q99747	312 aa	Predicted RBP	18.76	■□□□□ 0.59
TSC2-222	ENST00000568454	SEPT6	Q14141	434 aa		18.76	■□□□□ 0.59
TSC2-222	ENST00000568454	CCDC122	Q5T0U0	273 aa		18.76	■□□□□ 0.59
TSC2-222	ENST00000568454	CRNKL1	Q9BZJ0	848 aa	Known RBP	18.76	■□□□□ 0.59
TSC2-222	ENST00000568454	NDUFAB1	O14561	156 aa		18.76	■□□□□ 0.59
TSC2-222	ENST00000568454	IFIT1B	Q5T764	474 aa	Known RBP	18.76	■□□□□ 0.59
TSC2-222	ENST00000568454	RUFY3	Q7L099	469 aa		18.76	■□□□□ 0.59
TSC2-222	ENST00000568454	CCDC50	Q8IVM0	306 aa		18.76	■□□□□ 0.59
TSC2-222	ENST00000568454	TTF2	Q9UNY4	1162 aa	Known RBP	18.76	■□□□□ 0.59
TSC2-222	ENST00000568454	PARD3	Q8TEW0	1356 aa		18.76	■□□□□ 0.59
TSC2-222	ENST00000568454	ELP1	O95163	1332 aa		18.76	■□□□□ 0.59
TSC2-222	ENST00000568454	ADGRF5	Q8IZF2	1346 aa		18.76	■□□□□ 0.59
TSC2-222	ENST00000568454	PTPDC1	A2A3K4	754 aa		18.76	■□□□□ 0.59
TSC2-222	ENST00000568454	TRIM14	Q14142	442 aa		18.76	■□□□□ 0.59
TSC2-222	ENST00000568454	ANKLE2	Q86XL3	938 aa		18.76	■□□□□ 0.59
TSC2-222	ENST00000568454	CREB3L3	Q68CJ9	461 aa		18.75	■□□□□ 0.59
TSC2-222	ENST00000568454	C16orf71	Q8IYS4	520 aa	Predicted RBP	18.75	■□□□□ 0.59
TSC2-222	ENST00000568454	NAP1L3	Q99457	506 aa	Predicted RBP	18.75	■□□□□ 0.59
TSC2-222	ENST00000568454	CDC5L	Q99459	802 aa	Known RBP	18.75	■□□□□ 0.59
TSC2-222	ENST00000568454	TLDC2	A0PJX2	215 aa		18.75	■□□□□ 0.59
TSC2-222	ENST00000568454	TRIM7	Q9C029	511 aa		18.75	■□□□□ 0.59
TSC2-222	ENST00000568454	CHMP4BP1	P59074	171 aa		18.75	■□□□□ 0.59
TSC2-222	ENST00000568454	PLEKHM2	Q8IWE5	1019 aa		18.75	■□□□□ 0.59
TSC2-222	ENST00000568454	ZBTB3	Q9H5J0	574 aa		18.75	■□□□□ 0.59
TSC2-222	ENST00000568454	ANAPC4	Q9UJX5	808 aa		18.75	■□□□□ 0.59
TSC2-222	ENST00000568454	CALML3	P27482	149 aa		18.75	■□□□□ 0.59
TSC2-222	ENST00000568454	NOL3	O60936	208 aa	Known RBP	18.74	■□□□□ 0.59
TSC2-222	ENST00000568454	INTS8	Q75QN2	995 aa	Known RBP	18.74	■□□□□ 0.59
TSC2-222	ENST00000568454	TEX13A	Q9BXU3	409 aa	Predicted RBP	18.74	■□□□□ 0.59
TSC2-222	ENST00000568454	SEC24B	O95487	1268 aa		18.74	■□□□□ 0.59
TSC2-222	ENST00000568454	STX17	P56962	302 aa		18.74	■□□□□ 0.59
TSC2-222	ENST00000568454	IMPACT	Q9P2X3	320 aa		18.74	■□□□□ 0.59
TSC2-222	ENST00000568454	SWAP70	Q9UH65	585 aa		18.74	■□□□□ 0.59
TSC2-222	ENST00000568454	PLB1	Q6P1J6	1458 aa		18.74	■□□□□ 0.59
TSC2-222	ENST00000568454	ALDH3A1	P30838	453 aa		18.74	■□□□□ 0.59
TSC2-222	ENST00000568454	JAKMIP2	Q96AA8	810 aa		18.74	■□□□□ 0.59
TSC2-222	ENST00000568454	ZBTB40	Q9NUA8	1239 aa		18.74	■□□□□ 0.59
TSC2-222	ENST00000568454	GIGYF1	O75420	1035 aa	Predicted RBP	18.74	■□□□□ 0.59
TSC2-222	ENST00000568454	ATP5D	P30049	168 aa		18.74	■□□□□ 0.59
TSC2-222	ENST00000568454	GRIN2A	Q12879	1464 aa		18.74	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms