RNA–Protein interactions for RNA: ENST00000568428.5

SCAPER-220, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 590 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-220ENST00000568428 USP21Q9UK80 565 aa8.36□□□□□ -1.07
SCAPER-220ENST00000568428 TNFRSF21O75509 655 aa8.35□□□□□ -1.07
SCAPER-220ENST00000568428 ACPPP15309 386 aa8.35□□□□□ -1.07
SCAPER-220ENST00000568428 EHHADHQ08426 723 aa8.35□□□□□ -1.07
SCAPER-220ENST00000568428 MAP4K3Q8IVH8 894 aa8.35□□□□□ -1.07
SCAPER-220ENST00000568428 WFDC12Q8WWY7 111 aa8.35□□□□□ -1.07
SCAPER-220ENST00000568428 LACRTQ9GZZ8 138 aa8.35□□□□□ -1.07
SCAPER-220ENST00000568428 ADAM19Q9H013 955 aa8.35□□□□□ -1.07
SCAPER-220ENST00000568428 SEMA6BQ9H3T3 888 aa8.35□□□□□ -1.07
SCAPER-220ENST00000568428 DZANK1Q9NVP4 752 aa8.35□□□□□ -1.07
SCAPER-220ENST00000568428 LINC01387J3KSC0 135 aa8.34□□□□□ -1.07
SCAPER-220ENST00000568428 NOS3P29474 1203 aa8.34□□□□□ -1.07
SCAPER-220ENST00000568428 CDC27P30260 824 aa8.34□□□□□ -1.07
SCAPER-220ENST00000568428 TMEM130Q8N3G9 435 aa8.34□□□□□ -1.07
SCAPER-220ENST00000568428 GALNT11Q8NCW6 608 aa8.34□□□□□ -1.07
SCAPER-220ENST00000568428 EREGO14944 169 aa8.33□□□□□ -1.08
SCAPER-220ENST00000568428 IREB2P48200 963 aaKnown RBP8.33□□□□□ -1.08
SCAPER-220ENST00000568428 ARHGAP4P98171 946 aa8.33□□□□□ -1.08
SCAPER-220ENST00000568428 PDE4CQ08493 712 aa8.33□□□□□ -1.08
SCAPER-220ENST00000568428 SH2B1Q9NRF2 756 aaPredicted RBP8.33□□□□□ -1.08
SCAPER-220ENST00000568428 FOXD3Q9UJU5 478 aaPredicted RBP8.33□□□□□ -1.08
SCAPER-220ENST00000568428 TRPA1O75762 1119 aa8.32□□□□□ -1.08
SCAPER-220ENST00000568428 SNX29Q8TEQ0 813 aa8.32□□□□□ -1.08
SCAPER-220ENST00000568428 MRPL18Q9H0U6 180 aaKnown RBP8.32□□□□□ -1.08
SCAPER-220ENST00000568428 H3BRB1 525 aa8.31□□□□□ -1.08
SCAPER-220ENST00000568428 DYRK3O43781 588 aa8.31□□□□□ -1.08
SCAPER-220ENST00000568428 PHACTR2O75167 634 aa8.31□□□□□ -1.08
SCAPER-220ENST00000568428 PTPRAP18433 802 aa8.31□□□□□ -1.08
SCAPER-220ENST00000568428 EPHA1P21709 976 aa8.31□□□□□ -1.08
SCAPER-220ENST00000568428 TXNDC11Q6PKC3 985 aa8.31□□□□□ -1.08
SCAPER-220ENST00000568428 HHIPQ96QV1 700 aa8.31□□□□□ -1.08
SCAPER-220ENST00000568428 TUT1Q9H6E5 874 aaKnown RBP8.31□□□□□ -1.08
SCAPER-220ENST00000568428 PDE2AO00408 941 aaPredicted RBP8.3□□□□□ -1.08
SCAPER-220ENST00000568428 FSCN2O14926 492 aa8.3□□□□□ -1.08
SCAPER-220ENST00000568428 ALX3O95076 343 aa8.3□□□□□ -1.08
SCAPER-220ENST00000568428 H2AFB1P0C5Y9 115 aa8.3□□□□□ -1.08
SCAPER-220ENST00000568428 H2AFB2P0C5Z0 115 aa8.3□□□□□ -1.08
SCAPER-220ENST00000568428 GLYCTKQ8IVS8 523 aa8.3□□□□□ -1.08
SCAPER-220ENST00000568428 TMEM102Q8N9M5 508 aaPredicted RBP8.3□□□□□ -1.08
SCAPER-220ENST00000568428 DCAF11Q8TEB1 546 aa8.3□□□□□ -1.08
SCAPER-220ENST00000568428 NXPE3Q969Y0 559 aa8.3□□□□□ -1.08
SCAPER-220ENST00000568428 TP53INP1Q96A56 240 aa8.3□□□□□ -1.08
SCAPER-220ENST00000568428 ZFYVE28Q9HCC9 887 aa8.3□□□□□ -1.08
SCAPER-220ENST00000568428 F8W735 103 aaPredicted RBP8.29□□□□□ -1.08
SCAPER-220ENST00000568428 CDC25BP30305 580 aa8.29□□□□□ -1.08
SCAPER-220ENST00000568428 PEAR1Q5VY43 1037 aaPredicted RBP8.29□□□□□ -1.08
SCAPER-220ENST00000568428 DZIP1LQ8IYY4 767 aaKnown RBP8.29□□□□□ -1.08
SCAPER-220ENST00000568428 MEGF10Q96KG7 1140 aa8.29□□□□□ -1.08
SCAPER-220ENST00000568428 OSMRQ99650 979 aa8.29□□□□□ -1.08
SCAPER-220ENST00000568428 ZKSCAN3Q9BRR0 538 aa8.29□□□□□ -1.08
SCAPER-220ENST00000568428 AKTIPQ9H8T0 292 aa8.29□□□□□ -1.08
SCAPER-220ENST00000568428 KCNK4Q9NYG8 393 aa8.29□□□□□ -1.08
SCAPER-220ENST00000568428 EDN3P14138 238 aa8.28□□□□□ -1.08
SCAPER-220ENST00000568428 CD68P34810 354 aaPredicted RBP8.28□□□□□ -1.08
SCAPER-220ENST00000568428 FOXD4L6Q3SYB3 417 aaPredicted RBP8.28□□□□□ -1.08
SCAPER-220ENST00000568428 FOXD4L3Q6VB84 417 aaPredicted RBP8.28□□□□□ -1.08
SCAPER-220ENST00000568428 KRTAP4-8Q9BYQ9 185 aa8.28□□□□□ -1.08
SCAPER-220ENST00000568428 BRPF3Q9ULD4 1205 aa8.28□□□□□ -1.08
SCAPER-220ENST00000568428 Q6ZS46 218 aa8.27□□□□□ -1.09
SCAPER-220ENST00000568428 KLHL23Q8NBE8 558 aa8.27□□□□□ -1.09
SCAPER-220ENST00000568428 KLHDC7BQ96G42 594 aa8.27□□□□□ -1.09
SCAPER-220ENST00000568428 CARD10Q9BWT7 1032 aa8.27□□□□□ -1.09
SCAPER-220ENST00000568428 LATS2Q9NRM7 1088 aa8.27□□□□□ -1.09
SCAPER-220ENST00000568428 SOX13Q9UN79 622 aa8.27□□□□□ -1.09
SCAPER-220ENST00000568428 AMOTL2Q9Y2J4 779 aa8.27□□□□□ -1.09
SCAPER-220ENST00000568428 H3BRJ5 948 aa8.26□□□□□ -1.09
SCAPER-220ENST00000568428 WISP1O95388 367 aa8.26□□□□□ -1.09
SCAPER-220ENST00000568428 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.26□□□□□ -1.09
SCAPER-220ENST00000568428 CCER1Q8TC90 406 aaPredicted RBP8.26□□□□□ -1.09
SCAPER-220ENST00000568428 WNT8BQ93098 351 aa8.26□□□□□ -1.09
SCAPER-220ENST00000568428 DDX3YO15523 660 aaKnown RBP8.25□□□□□ -1.09
SCAPER-220ENST00000568428 ADAM11O75078 769 aa8.25□□□□□ -1.09
SCAPER-220ENST00000568428 IGHA2P01877 340 aa8.25□□□□□ -1.09
SCAPER-220ENST00000568428 FAM117BQ6P1L5 589 aa8.25□□□□□ -1.09
SCAPER-220ENST00000568428 AGGF1Q8N302 714 aaeCLIP8.25□□□□□ -1.09
SCAPER-220ENST00000568428 PSMG3-AS1Q96PY0 264 aa8.25□□□□□ -1.09
SCAPER-220ENST00000568428 CITED4Q96RK1 184 aa8.25□□□□□ -1.09
SCAPER-220ENST00000568428 FAM129BQ96TA1 746 aa8.25□□□□□ -1.09
SCAPER-220ENST00000568428 BHLHE41Q9C0J9 482 aaPredicted RBP8.25□□□□□ -1.09
SCAPER-220ENST00000568428 SEC31BQ9NQW1 1179 aa8.25□□□□□ -1.09
SCAPER-220ENST00000568428 NDUFB5O43674 189 aa8.24□□□□□ -1.09
SCAPER-220ENST00000568428 POLR3DP05423 398 aaPredicted RBP8.24□□□□□ -1.09
SCAPER-220ENST00000568428 CABP4P57796 275 aa8.24□□□□□ -1.09
SCAPER-220ENST00000568428 PIP4K2BP78356 416 aa8.24□□□□□ -1.09
SCAPER-220ENST00000568428 PRSS36Q5K4E3 855 aa8.24□□□□□ -1.09
SCAPER-220ENST00000568428 KIAA1211Q6ZU35 1233 aa8.24□□□□□ -1.09
SCAPER-220ENST00000568428 VN1R5Q7Z5H4 357 aa8.24□□□□□ -1.09
SCAPER-220ENST00000568428 GALNT12Q8IXK2 581 aa8.24□□□□□ -1.09
SCAPER-220ENST00000568428 FOXD4L4Q8WXT5 416 aaPredicted RBP8.24□□□□□ -1.09
SCAPER-220ENST00000568428 BSNDQ8WZ55 320 aa8.24□□□□□ -1.09
SCAPER-220ENST00000568428 OSGEPQ9NPF4 335 aa8.24□□□□□ -1.09
SCAPER-220ENST00000568428 GNEQ9Y223 722 aaKnown RBP8.24□□□□□ -1.09
SCAPER-220ENST00000568428 FAM177BA6PVY3 158 aa8.23□□□□□ -1.09
SCAPER-220ENST00000568428 BRD1O95696 1058 aa8.23□□□□□ -1.09
SCAPER-220ENST00000568428 HGSNATQ68CP4 663 aa8.23□□□□□ -1.09
SCAPER-220ENST00000568428 UBL7Q96S82 380 aaPredicted RBP8.23□□□□□ -1.09
SCAPER-220ENST00000568428 SOWAHDA6NJG2 315 aa8.22□□□□□ -1.09
SCAPER-220ENST00000568428 SOX1O00570 391 aaPredicted RBP8.22□□□□□ -1.09
SCAPER-220ENST00000568428 PDE3BQ13370 1112 aa8.22□□□□□ -1.09
SCAPER-220ENST00000568428 USPL1Q5W0Q7 1092 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms