RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 POLR2AP24928 1970 aaKnown RBP5.98□□□□□ -1.45
HERPUD1-213ENST00000568358 LAMB2P55268 1798 aa5.98□□□□□ -1.45
HERPUD1-213ENST00000568358 IRS4O14654 1257 aaPredicted RBP5.98□□□□□ -1.45
HERPUD1-213ENST00000568358 ANP32CO43423 234 aa5.98□□□□□ -1.45
HERPUD1-213ENST00000568358 ITGBL1O95965 494 aaPredicted RBP5.98□□□□□ -1.45
HERPUD1-213ENST00000568358 EPS15P42566 896 aa5.98□□□□□ -1.45
HERPUD1-213ENST00000568358 RPS8P62241 208 aaKnown RBP5.98□□□□□ -1.45
HERPUD1-213ENST00000568358 NEXNQ0ZGT2 675 aa5.98□□□□□ -1.45
HERPUD1-213ENST00000568358 TRIM28Q13263 835 aaKnown RBP5.98□□□□□ -1.45
HERPUD1-213ENST00000568358 MCM6Q14566 821 aa5.98□□□□□ -1.45
HERPUD1-213ENST00000568358 SF3B3Q15393 1217 aaKnown RBP5.98□□□□□ -1.45
HERPUD1-213ENST00000568358 AMHR2Q16671 573 aa5.98□□□□□ -1.45
HERPUD1-213ENST00000568358 RTL5Q5HYW3 569 aaPredicted RBP5.98□□□□□ -1.45
HERPUD1-213ENST00000568358 MAP1SQ66K74 1059 aaPredicted RBP5.98□□□□□ -1.45
HERPUD1-213ENST00000568358 C3orf67Q6ZVT6 689 aa5.98□□□□□ -1.45
HERPUD1-213ENST00000568358 TNS4Q8IZW8 715 aa5.98□□□□□ -1.45
HERPUD1-213ENST00000568358 KRI1Q8N9T8 703 aaKnown RBP5.98□□□□□ -1.45
HERPUD1-213ENST00000568358 ZBTB38Q8NAP3 1195 aaPredicted RBP5.98□□□□□ -1.45
HERPUD1-213ENST00000568358 CCDC191Q8NCU4 936 aa5.98□□□□□ -1.45
HERPUD1-213ENST00000568358 ZNF428Q96B54 188 aa5.98□□□□□ -1.45
HERPUD1-213ENST00000568358 ISCA1Q9BUE6 129 aa5.98□□□□□ -1.45
HERPUD1-213ENST00000568358 BEGAINQ9BUH8 593 aa5.98□□□□□ -1.45
HERPUD1-213ENST00000568358 ADARB2Q9NS39 739 aaKnown RBP5.98□□□□□ -1.45
HERPUD1-213ENST00000568358 ANKIB1Q9P2G1 1089 aa5.98□□□□□ -1.45
HERPUD1-213ENST00000568358 PASKQ96RG2 1323 aa5.98□□□□□ -1.45
HERPUD1-213ENST00000568358 RIMBP2O15034 1052 aa5.97□□□□□ -1.45
HERPUD1-213ENST00000568358 RAD17O75943 681 aa5.97□□□□□ -1.45
HERPUD1-213ENST00000568358 ZNF853P0CG23 659 aa5.97□□□□□ -1.45
HERPUD1-213ENST00000568358 ECE1P42892 770 aa5.97□□□□□ -1.45
HERPUD1-213ENST00000568358 MAP2K1Q02750 393 aaPredicted RBP5.97□□□□□ -1.45
HERPUD1-213ENST00000568358 CXCL9Q07325 125 aa5.97□□□□□ -1.45
HERPUD1-213ENST00000568358 KIAA2012Q0VF49 1180 aa5.97□□□□□ -1.45
HERPUD1-213ENST00000568358 IRF5Q13568 498 aa5.97□□□□□ -1.45
HERPUD1-213ENST00000568358 CCDC152Q4G0S7 254 aa5.97□□□□□ -1.45
HERPUD1-213ENST00000568358 RBM26Q5T8P6 1007 aaKnown RBP5.97□□□□□ -1.45
HERPUD1-213ENST00000568358 COL13A1Q5TAT6 717 aaPredicted RBP5.97□□□□□ -1.45
HERPUD1-213ENST00000568358 MYD88Q99836 296 aa5.97□□□□□ -1.45
HERPUD1-213ENST00000568358 ZC3H12CQ9C0D7 883 aaKnown RBP5.97□□□□□ -1.45
HERPUD1-213ENST00000568358 PHAXQ9H814 394 aaKnown RBP5.97□□□□□ -1.45
HERPUD1-213ENST00000568358 CWC25Q9NXE8 425 aaPredicted RBP5.97□□□□□ -1.45
HERPUD1-213ENST00000568358 GPRC5DQ9NZD1 345 aa5.97□□□□□ -1.45
HERPUD1-213ENST00000568358 CNOT7Q9UIV1 285 aaKnown RBP5.97□□□□□ -1.45
HERPUD1-213ENST00000568358 CDHR2Q9BYE9 1310 aa5.97□□□□□ -1.45
HERPUD1-213ENST00000568358 CNTNAP1P78357 1384 aa5.96□□□□□ -1.45
HERPUD1-213ENST00000568358 PDE8AO60658 829 aa5.96□□□□□ -1.46
HERPUD1-213ENST00000568358 EIF5BO60841 1220 aaKnown RBP5.96□□□□□ -1.46
HERPUD1-213ENST00000568358 PCCAP05165 728 aaPredicted RBP5.96□□□□□ -1.46
HERPUD1-213ENST00000568358 CTCFP49711 727 aaPredicted RBP5.96□□□□□ -1.46
HERPUD1-213ENST00000568358 VEGFBP49765 207 aa5.96□□□□□ -1.46
HERPUD1-213ENST00000568358 GMPSP49915 693 aaPredicted RBP5.96□□□□□ -1.46
HERPUD1-213ENST00000568358 SCNN1DP51172 638 aa5.96□□□□□ -1.46
HERPUD1-213ENST00000568358 KSR2Q6VAB6 950 aa5.96□□□□□ -1.46
HERPUD1-213ENST00000568358 CDC37L1Q7L3B6 337 aa5.96□□□□□ -1.46
HERPUD1-213ENST00000568358 ANKRD18AQ8IVF6 992 aa5.96□□□□□ -1.46
HERPUD1-213ENST00000568358 PDCD7Q8N8D1 485 aaKnown RBP5.96□□□□□ -1.46
HERPUD1-213ENST00000568358 C8orf58Q8NAV2 365 aa5.96□□□□□ -1.46
HERPUD1-213ENST00000568358 RETREG2Q8NC44 543 aa5.96□□□□□ -1.46
HERPUD1-213ENST00000568358 CDC5LQ99459 802 aaKnown RBP5.96□□□□□ -1.46
HERPUD1-213ENST00000568358 METTL22Q9BUU2 404 aaPredicted RBP5.96□□□□□ -1.46
HERPUD1-213ENST00000568358 TMEM121BQ9BXQ6 578 aaPredicted RBP5.96□□□□□ -1.46
HERPUD1-213ENST00000568358 GZF1Q9H116 711 aaPredicted RBP5.96□□□□□ -1.46
HERPUD1-213ENST00000568358 MRS2Q9HD23 443 aa5.96□□□□□ -1.46
HERPUD1-213ENST00000568358 GGA1Q9UJY5 639 aa5.96□□□□□ -1.46
HERPUD1-213ENST00000568358 MAP3K2Q9Y2U5 619 aa5.96□□□□□ -1.46
HERPUD1-213ENST00000568358 DDX60Q8IY21 1712 aaKnown RBP5.96□□□□□ -1.46
HERPUD1-213ENST00000568358 WDR33Q9C0J8 1336 aaKnown RBP5.96□□□□□ -1.46
HERPUD1-213ENST00000568358 MYH3P11055 1940 aa5.95□□□□□ -1.46
HERPUD1-213ENST00000568358 PI4KAP2A4QPH2 592 aa5.95□□□□□ -1.46
HERPUD1-213ENST00000568358 RASSF10A6NK89 507 aa5.95□□□□□ -1.46
HERPUD1-213ENST00000568358 ST18O60284 1047 aa5.95□□□□□ -1.46
HERPUD1-213ENST00000568358 PPP1R37O75864 691 aa5.95□□□□□ -1.46
HERPUD1-213ENST00000568358 RPS12P25398 132 aaKnown RBP5.95□□□□□ -1.46
HERPUD1-213ENST00000568358 GPSM2P81274 684 aa5.95□□□□□ -1.46
HERPUD1-213ENST00000568358 GRM1Q13255 1194 aa5.95□□□□□ -1.46
HERPUD1-213ENST00000568358 CCDC27Q2M243 656 aa5.95□□□□□ -1.46
HERPUD1-213ENST00000568358 TWISTNBQ3B726 338 aaPredicted RBP5.95□□□□□ -1.46
HERPUD1-213ENST00000568358 FOXD4L5Q5VV16 416 aaPredicted RBP5.95□□□□□ -1.46
HERPUD1-213ENST00000568358 WWC1Q8IX03 1113 aa5.95□□□□□ -1.46
HERPUD1-213ENST00000568358 PI4KAP1Q8N8J0 262 aa5.95□□□□□ -1.46
HERPUD1-213ENST00000568358 FBXO22Q8NEZ5 403 aa5.95□□□□□ -1.46
HERPUD1-213ENST00000568358 FOXD4L4Q8WXT5 416 aaPredicted RBP5.95□□□□□ -1.46
HERPUD1-213ENST00000568358 DPF2Q92785 391 aa5.95□□□□□ -1.46
HERPUD1-213ENST00000568358 CELF1Q92879 486 aaKnown RBP5.95□□□□□ -1.46
HERPUD1-213ENST00000568358 DCPSQ96C86 337 aaKnown RBP5.95□□□□□ -1.46
HERPUD1-213ENST00000568358 DBNDD1Q9H9R9 158 aa5.95□□□□□ -1.46
HERPUD1-213ENST00000568358 POLLQ9UGP5 575 aa5.95□□□□□ -1.46
HERPUD1-213ENST00000568358 SNED1Q8TER0 1413 aa5.94□□□□□ -1.46
HERPUD1-213ENST00000568358 ADAMTSL1Q8N6G6 1762 aa5.94□□□□□ -1.46
HERPUD1-213ENST00000568358 E9PSI1 815 aa5.94□□□□□ -1.46
HERPUD1-213ENST00000568358 PSMD14O00487 310 aa5.94□□□□□ -1.46
HERPUD1-213ENST00000568358 ECE2O60344 883 aa5.94□□□□□ -1.46
HERPUD1-213ENST00000568358 UFL1O94874 794 aa5.94□□□□□ -1.46
HERPUD1-213ENST00000568358 CELF2O95319 508 aaKnown RBP5.94□□□□□ -1.46
HERPUD1-213ENST00000568358 ATP2B4P23634 1241 aa5.94□□□□□ -1.46
HERPUD1-213ENST00000568358 IGHMBP2P38935 993 aaKnown RBP5.94□□□□□ -1.46
HERPUD1-213ENST00000568358 RBM25P49756 843 aaKnown RBP5.94□□□□□ -1.46
HERPUD1-213ENST00000568358 DOK7Q18PE1 504 aa5.94□□□□□ -1.46
HERPUD1-213ENST00000568358 MICALL2Q8IY33 904 aa5.94□□□□□ -1.46
HERPUD1-213ENST00000568358 TSPYL6Q8N831 410 aa5.94□□□□□ -1.46
HERPUD1-213ENST00000568358 TBC1D16Q8TBP0 767 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 610.5 ms