RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 TSHZ3Q63HK5 1081 aa17.74■□□□□ 0.43
COMMD4-221ENST00000567935 CLEC4GQ6UXB4 293 aa17.74■□□□□ 0.43
COMMD4-221ENST00000567935 TICAM2Q86XR7 235 aa17.74■□□□□ 0.43
COMMD4-221ENST00000567935 SNX21Q969T3 373 aa17.74■□□□□ 0.43
COMMD4-221ENST00000567935 EAF2Q96CJ1 260 aaPredicted RBP17.74■□□□□ 0.43
COMMD4-221ENST00000567935 EVI5LQ96CN4 794 aa17.74■□□□□ 0.43
COMMD4-221ENST00000567935 ESYT1Q9BSJ8 1104 aa17.74■□□□□ 0.43
COMMD4-221ENST00000567935 USP26Q9BXU7 913 aa17.74■□□□□ 0.43
COMMD4-221ENST00000567935 HACL1Q9UJ83 578 aa17.74■□□□□ 0.43
COMMD4-221ENST00000567935 CHMP3Q9Y3E7 222 aa17.74■□□□□ 0.43
COMMD4-221ENST00000567935 CAMTA2O94983 1202 aa17.73■□□□□ 0.43
COMMD4-221ENST00000567935 DGKZQ13574 1117 aa17.73■□□□□ 0.43
COMMD4-221ENST00000567935 TNNI3KQ59H18 835 aa17.73■□□□□ 0.43
COMMD4-221ENST00000567935 PRPF38BQ5VTL8 546 aaKnown RBP17.73■□□□□ 0.43
COMMD4-221ENST00000567935 TBC1D2BQ9UPU7 963 aa17.73■□□□□ 0.43
COMMD4-221ENST00000567935 FPGT-TNNI3KV9GXZ4 949 aa17.73■□□□□ 0.43
COMMD4-221ENST00000567935 BCORQ6W2J9 1755 aa17.73■□□□□ 0.43
COMMD4-221ENST00000567935 PDE8AO60658 829 aa17.72■□□□□ 0.43
COMMD4-221ENST00000567935 AOC2O75106 756 aa17.72■□□□□ 0.43
COMMD4-221ENST00000567935 MCCP23508 829 aa17.72■□□□□ 0.43
COMMD4-221ENST00000567935 ECE1P42892 770 aa17.72■□□□□ 0.43
COMMD4-221ENST00000567935 BICDL1Q6ZP65 573 aa17.72■□□□□ 0.43
COMMD4-221ENST00000567935 CCDC24Q8N4L8 307 aa17.72■□□□□ 0.43
COMMD4-221ENST00000567935 KLHDC4Q8TBB5 520 aa17.72■□□□□ 0.43
COMMD4-221ENST00000567935 RUFY2Q8WXA3 655 aa17.72■□□□□ 0.43
COMMD4-221ENST00000567935 TRMT112Q9UI30 125 aaKnown RBP17.72■□□□□ 0.43
COMMD4-221ENST00000567935 CASP8AP2Q9UKL3 1982 aa17.71■□□□□ 0.43
COMMD4-221ENST00000567935 SLX4Q8IY92 1834 aa17.71■□□□□ 0.43
COMMD4-221ENST00000567935 ATP5JP18859 108 aa17.71■□□□□ 0.43
COMMD4-221ENST00000567935 GPTP24298 496 aa17.71■□□□□ 0.43
COMMD4-221ENST00000567935 SOX10P56693 466 aa17.71■□□□□ 0.43
COMMD4-221ENST00000567935 TFCP2Q12800 502 aa17.71■□□□□ 0.43
COMMD4-221ENST00000567935 IFIT5Q13325 482 aaKnown RBP17.71■□□□□ 0.43
COMMD4-221ENST00000567935 RABEP1Q15276 862 aa17.71■□□□□ 0.43
COMMD4-221ENST00000567935 FAM89AQ96GI7 184 aa17.71■□□□□ 0.43
COMMD4-221ENST00000567935 SH3TC1Q8TE82 1336 aa17.71■□□□□ 0.42
COMMD4-221ENST00000567935 RFX7Q2KHR2 1363 aa17.7■□□□□ 0.42
COMMD4-221ENST00000567935 IRS4O14654 1257 aaPredicted RBP17.7■□□□□ 0.42
COMMD4-221ENST00000567935 CTSWP56202 376 aa17.7■□□□□ 0.42
COMMD4-221ENST00000567935 RTL5Q5HYW3 569 aaPredicted RBP17.7■□□□□ 0.42
COMMD4-221ENST00000567935 ATG9AQ7Z3C6 839 aa17.7■□□□□ 0.42
COMMD4-221ENST00000567935 HSCBQ8IWL3 235 aa17.7■□□□□ 0.42
COMMD4-221ENST00000567935 UTP14AQ9BVJ6 771 aaKnown RBP17.7■□□□□ 0.42
COMMD4-221ENST00000567935 ANAPC15P60006 121 aa17.69■□□□□ 0.42
COMMD4-221ENST00000567935 TAF7LQ5H9L4 462 aa17.69■□□□□ 0.42
COMMD4-221ENST00000567935 PNMA8AQ86V59 439 aaPredicted RBP17.69■□□□□ 0.42
COMMD4-221ENST00000567935 TBC1D2Q9BYX2 928 aa17.69■□□□□ 0.42
COMMD4-221ENST00000567935 CCDC8Q9H0W5 538 aaPredicted RBP17.69■□□□□ 0.42
COMMD4-221ENST00000567935 AKAP2Q9Y2D5 859 aa17.69■□□□□ 0.42
COMMD4-221ENST00000567935 UBN2Q6ZU65 1347 aa17.69■□□□□ 0.42
COMMD4-221ENST00000567935 LAMB2P55268 1798 aa17.68■□□□□ 0.42
COMMD4-221ENST00000567935 ANKRD18BA2A2Z9 1011 aa17.68■□□□□ 0.42
COMMD4-221ENST00000567935 PDE6BP35913 854 aa17.68■□□□□ 0.42
COMMD4-221ENST00000567935 CACNA1SQ13698 1873 aa17.68■□□□□ 0.42
COMMD4-221ENST00000567935 PRPF40BQ6NWY9 871 aaKnown RBP17.68■□□□□ 0.42
COMMD4-221ENST00000567935 TTLL11Q8NHH1 800 aa17.68■□□□□ 0.42
COMMD4-221ENST00000567935 BRIP1Q9BX63 1249 aa17.68■□□□□ 0.42
COMMD4-221ENST00000567935 DIAPH3Q9NSV4 1193 aa17.68■□□□□ 0.42
COMMD4-221ENST00000567935 CEP126Q9P2H0 1117 aa17.68■□□□□ 0.42
COMMD4-221ENST00000567935 RAD50Q92878 1312 aa17.68■□□□□ 0.42
COMMD4-221ENST00000567935 SCN7AQ01118 1682 aa17.67■□□□□ 0.42
COMMD4-221ENST00000567935 RTL9Q8NET4 1388 aa17.67■□□□□ 0.42
COMMD4-221ENST00000567935 ZNF609O15014 1411 aa17.67■□□□□ 0.42
COMMD4-221ENST00000567935 PRR5LQ6MZQ0 368 aa17.67■□□□□ 0.42
COMMD4-221ENST00000567935 IL17RAQ96F46 866 aa17.67■□□□□ 0.42
COMMD4-221ENST00000567935 KIF2CQ99661 725 aa17.67■□□□□ 0.42
COMMD4-221ENST00000567935 DBNLQ9UJU6 430 aaKnown RBP17.67■□□□□ 0.42
COMMD4-221ENST00000567935 SGSM2O43147 1006 aa17.66■□□□□ 0.42
COMMD4-221ENST00000567935 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.66■□□□□ 0.42
COMMD4-221ENST00000567935 ANP32EQ9BTT0 268 aa17.66■□□□□ 0.42
COMMD4-221ENST00000567935 SPEF2Q9C093 1822 aa17.65■□□□□ 0.42
COMMD4-221ENST00000567935 MAP2K2P36507 400 aa17.65■□□□□ 0.42
COMMD4-221ENST00000567935 CST9Q5W186 159 aa17.65■□□□□ 0.42
COMMD4-221ENST00000567935 TBC1D9BQ66K14 1250 aa17.65■□□□□ 0.42
COMMD4-221ENST00000567935 KIAA1211Q6ZU35 1233 aa17.65■□□□□ 0.42
COMMD4-221ENST00000567935 CNKSR1Q969H4 720 aa17.65■□□□□ 0.42
COMMD4-221ENST00000567935 TLR7Q9NYK1 1049 aaKnown RBP17.65■□□□□ 0.42
COMMD4-221ENST00000567935 NIP7Q9Y221 180 aaKnown RBP eCLIP17.65■□□□□ 0.42
COMMD4-221ENST00000567935 TLL2Q9Y6L7 1015 aa17.65■□□□□ 0.42
COMMD4-221ENST00000567935 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.65■□□□□ 0.42
COMMD4-221ENST00000567935 ABCC12Q96J65 1359 aa17.65■□□□□ 0.42
COMMD4-221ENST00000567935 CA12O43570 354 aa17.64■□□□□ 0.41
COMMD4-221ENST00000567935 ITGA6P23229 1130 aa17.64■□□□□ 0.41
COMMD4-221ENST00000567935 SOGA3Q5TF21 947 aa17.64■□□□□ 0.41
COMMD4-221ENST00000567935 SUSD4Q5VX71 490 aa17.64■□□□□ 0.41
COMMD4-221ENST00000567935 HAUS7Q99871 368 aa17.64■□□□□ 0.41
COMMD4-221ENST00000567935 ANO2Q9NQ90 1003 aa17.64■□□□□ 0.41
COMMD4-221ENST00000567935 ZNF277Q9NRM2 450 aaPredicted RBP17.64■□□□□ 0.41
COMMD4-221ENST00000567935 TRAF5O00463 557 aa17.63■□□□□ 0.41
COMMD4-221ENST00000567935 NTSR2O95665 410 aa17.63■□□□□ 0.41
COMMD4-221ENST00000567935 SLC4A3P48751 1232 aa17.63■□□□□ 0.41
COMMD4-221ENST00000567935 LRRC24Q50LG9 513 aa17.63■□□□□ 0.41
COMMD4-221ENST00000567935 STYK1Q6J9G0 422 aa17.63■□□□□ 0.41
COMMD4-221ENST00000567935 DBNDD2Q9BQY9 259 aa17.63■□□□□ 0.41
COMMD4-221ENST00000567935 BOLA2Q9H3K6 86 aa17.63■□□□□ 0.41
COMMD4-221ENST00000567935 SNRKQ9NRH2 765 aa17.63■□□□□ 0.41
COMMD4-221ENST00000567935 ST18O60284 1047 aa17.62■□□□□ 0.41
COMMD4-221ENST00000567935 MAP4K4O95819 1239 aaPredicted RBP17.62■□□□□ 0.41
COMMD4-221ENST00000567935 CCDC152Q4G0S7 254 aa17.62■□□□□ 0.41
COMMD4-221ENST00000567935 C7orf43Q8WVR3 580 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms