RNA–Protein interactions for RNA: ENST00000567710.5

NSMCE1-213, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 472 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-213ENST00000567710 CIAO1O76071 339 aa13.39□□□□□ -0.27
NSMCE1-213ENST00000567710 ATG9AQ7Z3C6 839 aa13.39□□□□□ -0.27
NSMCE1-213ENST00000567710 PODNQ7Z5L7 613 aa13.39□□□□□ -0.27
NSMCE1-213ENST00000567710 C16orf71Q8IYS4 520 aaPredicted RBP13.39□□□□□ -0.27
NSMCE1-213ENST00000567710 COA1Q9GZY4 146 aa13.39□□□□□ -0.27
NSMCE1-213ENST00000567710 HACL1Q9UJ83 578 aa13.39□□□□□ -0.27
NSMCE1-213ENST00000567710 DDX19BQ9UMR2 479 aa13.39□□□□□ -0.27
NSMCE1-213ENST00000567710 TOMM70O94826 608 aa13.38□□□□□ -0.27
NSMCE1-213ENST00000567710 PDE8BO95263 885 aa13.38□□□□□ -0.27
NSMCE1-213ENST00000567710 LMOD1P29536 600 aaPredicted RBP13.38□□□□□ -0.27
NSMCE1-213ENST00000567710 GMPSP49915 693 aaPredicted RBP13.38□□□□□ -0.27
NSMCE1-213ENST00000567710 TAF1DQ9H5J8 278 aaPredicted RBP13.38□□□□□ -0.27
NSMCE1-213ENST00000567710 ZBTB12Q9Y330 459 aaPredicted RBP13.38□□□□□ -0.27
NSMCE1-213ENST00000567710 SCN9AQ15858 1988 aa13.38□□□□□ -0.27
NSMCE1-213ENST00000567710 SCN4AP35499 1836 aa13.37□□□□□ -0.27
NSMCE1-213ENST00000567710 VIL1P09327 827 aaKnown RBP13.37□□□□□ -0.27
NSMCE1-213ENST00000567710 EPHX2P34913 555 aa13.37□□□□□ -0.27
NSMCE1-213ENST00000567710 IL15P40933 162 aaPredicted RBP13.37□□□□□ -0.27
NSMCE1-213ENST00000567710 EPS15P42566 896 aa13.37□□□□□ -0.27
NSMCE1-213ENST00000567710 RRP1P56182 461 aaKnown RBP13.37□□□□□ -0.27
NSMCE1-213ENST00000567710 ATP8B2P98198 1209 aa13.37□□□□□ -0.27
NSMCE1-213ENST00000567710 ZNF804AQ7Z570 1209 aa13.37□□□□□ -0.27
NSMCE1-213ENST00000567710 RBM46Q8TBY0 533 aaKnown RBP13.37□□□□□ -0.27
NSMCE1-213ENST00000567710 CD209Q9NNX6 404 aa13.37□□□□□ -0.27
NSMCE1-213ENST00000567710 USP17L3A6NCW0 530 aa13.36□□□□□ -0.27
NSMCE1-213ENST00000567710 USP17L4A6NCW7 530 aa13.36□□□□□ -0.27
NSMCE1-213ENST00000567710 FGFR2P21802 821 aa13.36□□□□□ -0.27
NSMCE1-213ENST00000567710 C1QTNF8P60827 252 aa13.36□□□□□ -0.27
NSMCE1-213ENST00000567710 POLA2Q14181 598 aa13.36□□□□□ -0.27
NSMCE1-213ENST00000567710 PUM3Q15397 648 aaKnown RBP13.36□□□□□ -0.27
NSMCE1-213ENST00000567710 CEP85Q6P2H3 762 aa13.36□□□□□ -0.27
NSMCE1-213ENST00000567710 USP17L1Q7RTZ2 530 aa13.36□□□□□ -0.27
NSMCE1-213ENST00000567710 SSH3Q8TE77 659 aa13.36□□□□□ -0.27
NSMCE1-213ENST00000567710 ZBTB40Q9NUA8 1239 aa13.36□□□□□ -0.27
NSMCE1-213ENST00000567710 GPRC5DQ9NZD1 345 aa13.36□□□□□ -0.27
NSMCE1-213ENST00000567710 POTEIP0CG38 1075 aa13.35□□□□□ -0.27
NSMCE1-213ENST00000567710 POTEJP0CG39 1038 aa13.35□□□□□ -0.27
NSMCE1-213ENST00000567710 IL1R1P14778 569 aa13.35□□□□□ -0.27
NSMCE1-213ENST00000567710 RPS12P25398 132 aaKnown RBP13.35□□□□□ -0.27
NSMCE1-213ENST00000567710 GYG1P46976 350 aa13.35□□□□□ -0.27
NSMCE1-213ENST00000567710 EAPPQ56P03 285 aaPredicted RBP13.35□□□□□ -0.27
NSMCE1-213ENST00000567710 RSBN1LQ6PCB5 846 aaPredicted RBP13.35□□□□□ -0.27
NSMCE1-213ENST00000567710 DPF2Q92785 391 aa13.35□□□□□ -0.27
NSMCE1-213ENST00000567710 FAM84BQ96KN1 310 aaPredicted RBP13.35□□□□□ -0.27
NSMCE1-213ENST00000567710 CHMP4BQ9H444 224 aaKnown RBP13.35□□□□□ -0.27
NSMCE1-213ENST00000567710 CEP126Q9P2H0 1117 aa13.35□□□□□ -0.27
NSMCE1-213ENST00000567710 ZNF609O15014 1411 aa13.35□□□□□ -0.27
NSMCE1-213ENST00000567710 SHTN1A0MZ66 631 aa13.34□□□□□ -0.27
NSMCE1-213ENST00000567710 IFIT1P09914 478 aaKnown RBP13.34□□□□□ -0.27
NSMCE1-213ENST00000567710 SLC5A1P13866 664 aa13.34□□□□□ -0.27
NSMCE1-213ENST00000567710 HIBADHP31937 336 aaKnown RBP13.34□□□□□ -0.27
NSMCE1-213ENST00000567710 DACT2Q5SW24 774 aa13.34□□□□□ -0.27
NSMCE1-213ENST00000567710 STRIP1Q5VSL9 837 aa13.34□□□□□ -0.27
NSMCE1-213ENST00000567710 TTLL5Q6EMB2 1281 aa13.34□□□□□ -0.27
NSMCE1-213ENST00000567710 PNMA8AQ86V59 439 aaPredicted RBP13.34□□□□□ -0.27
NSMCE1-213ENST00000567710 MICALL2Q8IY33 904 aa13.34□□□□□ -0.27
NSMCE1-213ENST00000567710 LPIN2Q92539 896 aa13.34□□□□□ -0.27
NSMCE1-213ENST00000567710 FBXW7Q969H0 707 aa13.34□□□□□ -0.27
NSMCE1-213ENST00000567710 ADARB2Q9NS39 739 aaKnown RBP13.34□□□□□ -0.27
NSMCE1-213ENST00000567710 CNOT7Q9UIV1 285 aaKnown RBP13.34□□□□□ -0.27
NSMCE1-213ENST00000567710 PSME4Q14997 1843 aa13.34□□□□□ -0.27
NSMCE1-213ENST00000567710 GTF2IP78347 998 aa13.33□□□□□ -0.28
NSMCE1-213ENST00000567710 G3BP1Q13283 466 aaKnown RBP eCLIP13.33□□□□□ -0.28
NSMCE1-213ENST00000567710 ATP2B3Q16720 1220 aa13.33□□□□□ -0.28
NSMCE1-213ENST00000567710 CAVIN4Q5BKX8 364 aa13.33□□□□□ -0.28
NSMCE1-213ENST00000567710 FBXO33Q7Z6M2 555 aa13.33□□□□□ -0.28
NSMCE1-213ENST00000567710 LDHDQ86WU2 507 aa13.33□□□□□ -0.28
NSMCE1-213ENST00000567710 SMC1BQ8NDV3 1235 aa13.33□□□□□ -0.28
NSMCE1-213ENST00000567710 AGBL3Q8NEM8 1001 aa13.33□□□□□ -0.28
NSMCE1-213ENST00000567710 GMLQ99445 158 aa13.33□□□□□ -0.28
NSMCE1-213ENST00000567710 MXD3Q9BW11 206 aa13.33□□□□□ -0.28
NSMCE1-213ENST00000567710 H7C1D1 291 aa13.32□□□□□ -0.28
NSMCE1-213ENST00000567710 BCAMP50895 628 aa13.32□□□□□ -0.28
NSMCE1-213ENST00000567710 TFCP2Q12800 502 aa13.32□□□□□ -0.28
NSMCE1-213ENST00000567710 FSTL1Q12841 308 aa13.32□□□□□ -0.28
NSMCE1-213ENST00000567710 USP50Q70EL3 339 aaPredicted RBP13.32□□□□□ -0.28
NSMCE1-213ENST00000567710 VPS37DQ86XT2 251 aa13.32□□□□□ -0.28
NSMCE1-213ENST00000567710 TDRD7Q8NHU6 1098 aaKnown RBP13.32□□□□□ -0.28
NSMCE1-213ENST00000567710 TRPM4Q8TD43 1214 aa13.32□□□□□ -0.28
NSMCE1-213ENST00000567710 NOP58Q9Y2X3 529 aaKnown RBP13.32□□□□□ -0.28
NSMCE1-213ENST00000567710 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.32□□□□□ -0.28
NSMCE1-213ENST00000567710 ADAMTSL1Q8N6G6 1762 aa13.32□□□□□ -0.28
NSMCE1-213ENST00000567710 ZNF646O15015 1829 aaPredicted RBP13.32□□□□□ -0.28
NSMCE1-213ENST00000567710 SURF6O75683 361 aaKnown RBP13.31□□□□□ -0.28
NSMCE1-213ENST00000567710 SASH1O94885 1247 aa13.31□□□□□ -0.28
NSMCE1-213ENST00000567710 CHADLQ6NUI6 762 aa13.31□□□□□ -0.28
NSMCE1-213ENST00000567710 RPAP2Q8IXW5 612 aaPredicted RBP13.31□□□□□ -0.28
NSMCE1-213ENST00000567710 JAG2Q9Y219 1238 aa13.31□□□□□ -0.28
NSMCE1-213ENST00000567710 CLEC11AQ9Y240 323 aa13.31□□□□□ -0.28
NSMCE1-213ENST00000567710 MYO3BQ8WXR4 1341 aa13.31□□□□□ -0.28
NSMCE1-213ENST00000567710 A0A1B0GUL7 405 aa13.3□□□□□ -0.28
NSMCE1-213ENST00000567710 EGFRP00533 1210 aa13.3□□□□□ -0.28
NSMCE1-213ENST00000567710 HIRAP54198 1017 aaPredicted RBP13.3□□□□□ -0.28
NSMCE1-213ENST00000567710 ZNF280AP59817 542 aaPredicted RBP13.3□□□□□ -0.28
NSMCE1-213ENST00000567710 OS9Q13438 667 aaPredicted RBP13.3□□□□□ -0.28
NSMCE1-213ENST00000567710 TBC1D10BQ4KMP7 808 aaPredicted RBP13.3□□□□□ -0.28
NSMCE1-213ENST00000567710 SAMD7Q7Z3H4 446 aa13.3□□□□□ -0.28
NSMCE1-213ENST00000567710 SIRT2Q8IXJ6 389 aa13.3□□□□□ -0.28
NSMCE1-213ENST00000567710 IQSEC3Q9UPP2 1182 aaPredicted RBP13.3□□□□□ -0.28
NSMCE1-213ENST00000567710 AKAP2Q9Y2D5 859 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms