RNA–Protein interactions for RNA: ENST00000566557.5

SCAMP2-208, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-208ENST00000566557 DCAF8Q5TAQ9 597 aa20.32■□□□□ 0.84
SCAMP2-208ENST00000566557 EYA2O00167 538 aa20.31■□□□□ 0.84
SCAMP2-208ENST00000566557 KIAA2012Q0VF49 1180 aa20.31■□□□□ 0.84
SCAMP2-208ENST00000566557 CEP85Q6P2H3 762 aa20.31■□□□□ 0.84
SCAMP2-208ENST00000566557 ZC3H12CQ9C0D7 883 aaKnown RBP20.31■□□□□ 0.84
SCAMP2-208ENST00000566557 ZBTB40Q9NUA8 1239 aa20.31■□□□□ 0.84
SCAMP2-208ENST00000566557 LEMD3Q9Y2U8 911 aa20.31■□□□□ 0.84
SCAMP2-208ENST00000566557 ZNF804BA4D1E1 1349 aa20.3■□□□□ 0.84
SCAMP2-208ENST00000566557 ATP8B2P98198 1209 aa20.3■□□□□ 0.84
SCAMP2-208ENST00000566557 VPS33BQ9H267 617 aa20.3■□□□□ 0.84
SCAMP2-208ENST00000566557 WBP1LQ9NX94 342 aa20.3■□□□□ 0.84
SCAMP2-208ENST00000566557 RIPOR2Q9Y4F9 1068 aa20.3■□□□□ 0.84
SCAMP2-208ENST00000566557 WTIPA6NIX2 430 aaPredicted RBP20.29■□□□□ 0.84
SCAMP2-208ENST00000566557 TMEM88BA6NKF7 163 aa20.29■□□□□ 0.84
SCAMP2-208ENST00000566557 SNAP23O00161 211 aa20.29■□□□□ 0.84
SCAMP2-208ENST00000566557 DOK7Q18PE1 504 aa20.29■□□□□ 0.84
SCAMP2-208ENST00000566557 DBNDD1Q9H9R9 158 aa20.29■□□□□ 0.84
SCAMP2-208ENST00000566557 COPRSQ9NQ92 184 aa20.29■□□□□ 0.84
SCAMP2-208ENST00000566557 MED23Q9ULK4 1368 aa20.29■□□□□ 0.84
SCAMP2-208ENST00000566557 PASKQ96RG2 1323 aa20.28■□□□□ 0.84
SCAMP2-208ENST00000566557 IQCA1LA6NCM1 817 aa20.28■□□□□ 0.84
SCAMP2-208ENST00000566557 EIF6P56537 245 aaKnown RBP20.28■□□□□ 0.84
SCAMP2-208ENST00000566557 OS9Q13438 667 aaPredicted RBP20.28■□□□□ 0.84
SCAMP2-208ENST00000566557 LDHDQ86WU2 507 aa20.28■□□□□ 0.84
SCAMP2-208ENST00000566557 ABHD8Q96I13 439 aa20.28■□□□□ 0.84
SCAMP2-208ENST00000566557 ZNF541Q9H0D2 1346 aa20.27■□□□□ 0.84
SCAMP2-208ENST00000566557 CIAO1O76071 339 aa20.27■□□□□ 0.84
SCAMP2-208ENST00000566557 KLRK1P26718 216 aa20.27■□□□□ 0.84
SCAMP2-208ENST00000566557 SSH3Q8TE77 659 aa20.27■□□□□ 0.84
SCAMP2-208ENST00000566557 FBXO3Q9UK99 471 aa20.27■□□□□ 0.84
SCAMP2-208ENST00000566557 ECE2O60344 883 aa20.26■□□□□ 0.83
SCAMP2-208ENST00000566557 IL15P40933 162 aaPredicted RBP20.26■□□□□ 0.83
SCAMP2-208ENST00000566557 IRX6P78412 446 aaPredicted RBP20.26■□□□□ 0.83
SCAMP2-208ENST00000566557 G3BP1Q13283 466 aaKnown RBP eCLIP20.26■□□□□ 0.83
SCAMP2-208ENST00000566557 POLA2Q14181 598 aa20.26■□□□□ 0.83
SCAMP2-208ENST00000566557 ATG9AQ7Z3C6 839 aa20.26■□□□□ 0.83
SCAMP2-208ENST00000566557 CEP126Q9P2H0 1117 aa20.26■□□□□ 0.83
SCAMP2-208ENST00000566557 HMMRO75330 724 aa20.25■□□□□ 0.83
SCAMP2-208ENST00000566557 SURF6O75683 361 aaKnown RBP20.25■□□□□ 0.83
SCAMP2-208ENST00000566557 ITGBL1O95965 494 aaPredicted RBP20.25■□□□□ 0.83
SCAMP2-208ENST00000566557 RPAP2Q8IXW5 612 aaPredicted RBP20.25■□□□□ 0.83
SCAMP2-208ENST00000566557 TAF1DQ9H5J8 278 aaPredicted RBP20.25■□□□□ 0.83
SCAMP2-208ENST00000566557 ZNRF3Q9ULT6 936 aa20.25■□□□□ 0.83
SCAMP2-208ENST00000566557 CLEC11AQ9Y240 323 aa20.25■□□□□ 0.83
SCAMP2-208ENST00000566557 GJA3Q9Y6H8 435 aa20.25■□□□□ 0.83
SCAMP2-208ENST00000566557 FZD9O00144 591 aa20.24■□□□□ 0.83
SCAMP2-208ENST00000566557 PDE8BO95263 885 aa20.24■□□□□ 0.83
SCAMP2-208ENST00000566557 UBE4AQ14139 1066 aa20.24■□□□□ 0.83
SCAMP2-208ENST00000566557 PUM3Q15397 648 aaKnown RBP20.24■□□□□ 0.83
SCAMP2-208ENST00000566557 EAPPQ56P03 285 aaPredicted RBP20.24■□□□□ 0.83
SCAMP2-208ENST00000566557 VGLL2Q8N8G2 317 aa20.24■□□□□ 0.83
SCAMP2-208ENST00000566557 RAD17O75943 681 aa20.23■□□□□ 0.83
SCAMP2-208ENST00000566557 HSPA8P11142 646 aaKnown RBP20.23■□□□□ 0.83
SCAMP2-208ENST00000566557 DEFB115Q30KQ5 88 aa20.23■□□□□ 0.83
SCAMP2-208ENST00000566557 TXNRD3Q86VQ6 643 aa20.23■□□□□ 0.83
SCAMP2-208ENST00000566557 FBXW7Q969H0 707 aa20.23■□□□□ 0.83
SCAMP2-208ENST00000566557 YDJCA8MPS7 323 aa20.22■□□□□ 0.83
SCAMP2-208ENST00000566557 CENPBP07199 599 aaPredicted RBP20.22■□□□□ 0.83
SCAMP2-208ENST00000566557 IFIT1P09914 478 aaKnown RBP20.22■□□□□ 0.83
SCAMP2-208ENST00000566557 SLC5A1P13866 664 aa20.22■□□□□ 0.83
SCAMP2-208ENST00000566557 TFCP2Q12800 502 aa20.22■□□□□ 0.83
SCAMP2-208ENST00000566557 ATP2B3Q16720 1220 aa20.22■□□□□ 0.83
SCAMP2-208ENST00000566557 ZNF804AQ7Z570 1209 aa20.22■□□□□ 0.83
SCAMP2-208ENST00000566557 EXOC6BQ9Y2D4 811 aa20.22■□□□□ 0.83
SCAMP2-208ENST00000566557 ARAP2Q8WZ64 1704 aa20.22■□□□□ 0.83
SCAMP2-208ENST00000566557 MAP2K1Q02750 393 aaPredicted RBP20.21■□□□□ 0.83
SCAMP2-208ENST00000566557 MLLT1Q03111 559 aaPredicted RBP20.21■□□□□ 0.83
SCAMP2-208ENST00000566557 CIAPIN1Q6FI81 312 aa20.21■□□□□ 0.83
SCAMP2-208ENST00000566557 EXOC6Q8TAG9 804 aa20.21■□□□□ 0.83
SCAMP2-208ENST00000566557 L3MBTL3Q96JM7 780 aaPredicted RBP20.21■□□□□ 0.83
SCAMP2-208ENST00000566557 COA1Q9GZY4 146 aa20.21■□□□□ 0.83
SCAMP2-208ENST00000566557 CCDC85CA6NKD9 419 aa20.2■□□□□ 0.82
SCAMP2-208ENST00000566557 GYG1P46976 350 aa20.2■□□□□ 0.82
SCAMP2-208ENST00000566557 VPS37DQ86XT2 251 aa20.2■□□□□ 0.82
SCAMP2-208ENST00000566557 SIRT2Q8IXJ6 389 aa20.2■□□□□ 0.82
SCAMP2-208ENST00000566557 PCDH10Q9P2E7 1040 aa20.2■□□□□ 0.82
SCAMP2-208ENST00000566557 SCN9AQ15858 1988 aa20.2■□□□□ 0.82
SCAMP2-208ENST00000566557 ZNF609O15014 1411 aa20.19■□□□□ 0.82
SCAMP2-208ENST00000566557 PSME4Q14997 1843 aa20.19■□□□□ 0.82
SCAMP2-208ENST00000566557 APBB1O00213 710 aa20.19■□□□□ 0.82
SCAMP2-208ENST00000566557 CXCL9Q07325 125 aa20.19■□□□□ 0.82
SCAMP2-208ENST00000566557 TNIP1Q15025 636 aa20.19■□□□□ 0.82
SCAMP2-208ENST00000566557 CAVIN4Q5BKX8 364 aa20.19■□□□□ 0.82
SCAMP2-208ENST00000566557 C15orf52Q6ZUT6 534 aaKnown RBP20.19■□□□□ 0.82
SCAMP2-208ENST00000566557 LPIN2Q92539 896 aa20.19■□□□□ 0.82
SCAMP2-208ENST00000566557 WDR33Q9C0J8 1336 aaKnown RBP20.19■□□□□ 0.82
SCAMP2-208ENST00000566557 IRS2Q9Y4H2 1338 aa20.19■□□□□ 0.82
SCAMP2-208ENST00000566557 RASSF10A6NK89 507 aa20.18■□□□□ 0.82
SCAMP2-208ENST00000566557 FGFR2P21802 821 aa20.18■□□□□ 0.82
SCAMP2-208ENST00000566557 PODNQ7Z5L7 613 aa20.18■□□□□ 0.82
SCAMP2-208ENST00000566557 CNTROBQ8N137 903 aa20.18■□□□□ 0.82
SCAMP2-208ENST00000566557 GPC2Q8N158 579 aa20.18■□□□□ 0.82
SCAMP2-208ENST00000566557 BCL11AQ9H165 835 aa20.18■□□□□ 0.82
SCAMP2-208ENST00000566557 HACL1Q9UJ83 578 aa20.18■□□□□ 0.82
SCAMP2-208ENST00000566557 AKAP2Q9Y2D5 859 aa20.18■□□□□ 0.82
SCAMP2-208ENST00000566557 MYH13Q9UKX3 1938 aa20.17■□□□□ 0.82
SCAMP2-208ENST00000566557 PSMD14O00487 310 aa20.17■□□□□ 0.82
SCAMP2-208ENST00000566557 HIBADHP31937 336 aaKnown RBP20.17■□□□□ 0.82
SCAMP2-208ENST00000566557 HSP90AB4PQ58FF6 505 aa20.17■□□□□ 0.82
SCAMP2-208ENST00000566557 CD209Q9NNX6 404 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms