RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 PPIP5K2O43314 1243 aa10.11□□□□□ -0.79
CDH13-208ENST00000566333 IGHDP01880 384 aa10.11□□□□□ -0.79
CDH13-208ENST00000566333 UBE4AQ14139 1066 aa10.11□□□□□ -0.79
CDH13-208ENST00000566333 ATP2B3Q16720 1220 aa10.11□□□□□ -0.79
CDH13-208ENST00000566333 C9orf131Q5VYM1 1079 aa10.11□□□□□ -0.79
CDH13-208ENST00000566333 SUPT20HQ8NEM7 779 aa10.11□□□□□ -0.79
CDH13-208ENST00000566333 TMX4Q9H1E5 349 aaPredicted RBP10.11□□□□□ -0.79
CDH13-208ENST00000566333 DCTPP1Q9H773 170 aa10.11□□□□□ -0.79
CDH13-208ENST00000566333 RNF216Q9NWF9 866 aaPredicted RBP10.11□□□□□ -0.79
CDH13-208ENST00000566333 RNF181Q9P0P0 153 aa10.11□□□□□ -0.79
CDH13-208ENST00000566333 SCN4AP35499 1836 aa10.11□□□□□ -0.79
CDH13-208ENST00000566333 AK9Q5TCS8 1911 aa10.11□□□□□ -0.79
CDH13-208ENST00000566333 ZNF541Q9H0D2 1346 aa10.1□□□□□ -0.79
CDH13-208ENST00000566333 YDJCA8MPS7 323 aa10.1□□□□□ -0.79
CDH13-208ENST00000566333 ADORA1P30542 326 aa10.1□□□□□ -0.79
CDH13-208ENST00000566333 KCNJ4P48050 445 aa10.1□□□□□ -0.79
CDH13-208ENST00000566333 G3BP1Q13283 466 aaKnown RBP eCLIP10.1□□□□□ -0.79
CDH13-208ENST00000566333 WASHC4Q2M389 1173 aa10.1□□□□□ -0.79
CDH13-208ENST00000566333 LARGE2Q8N3Y3 721 aa10.1□□□□□ -0.79
CDH13-208ENST00000566333 RHPN1Q8TCX5 695 aa10.1□□□□□ -0.79
CDH13-208ENST00000566333 EYA3Q99504 573 aa10.1□□□□□ -0.79
CDH13-208ENST00000566333 VPS33BQ9H267 617 aa10.1□□□□□ -0.79
CDH13-208ENST00000566333 GPR108Q9NPR9 543 aa10.1□□□□□ -0.79
CDH13-208ENST00000566333 TLR7Q9NYK1 1049 aaKnown RBP10.1□□□□□ -0.79
CDH13-208ENST00000566333 CEP126Q9P2H0 1117 aa10.1□□□□□ -0.79
CDH13-208ENST00000566333 KDM2BQ8NHM5 1336 aa10.09□□□□□ -0.79
CDH13-208ENST00000566333 ZC3H4Q9UPT8 1303 aaKnown RBP10.09□□□□□ -0.79
CDH13-208ENST00000566333 A0A1B0GUL7 405 aa10.09□□□□□ -0.79
CDH13-208ENST00000566333 RIMBP2O15034 1052 aa10.09□□□□□ -0.79
CDH13-208ENST00000566333 OS9Q13438 667 aaPredicted RBP10.09□□□□□ -0.79
CDH13-208ENST00000566333 HSP90AB4PQ58FF6 505 aa10.09□□□□□ -0.79
CDH13-208ENST00000566333 TNNI3KQ59H18 835 aa10.09□□□□□ -0.79
CDH13-208ENST00000566333 ERC1Q8IUD2 1116 aa10.09□□□□□ -0.79
CDH13-208ENST00000566333 SMC5Q8IY18 1101 aa10.09□□□□□ -0.79
CDH13-208ENST00000566333 LPIN2Q92539 896 aa10.09□□□□□ -0.79
CDH13-208ENST00000566333 DBNDD1Q9H9R9 158 aa10.09□□□□□ -0.79
CDH13-208ENST00000566333 FPGT-TNNI3KV9GXZ4 949 aa10.09□□□□□ -0.79
CDH13-208ENST00000566333 MYH2Q9UKX2 1941 aa10.08□□□□□ -0.8
CDH13-208ENST00000566333 FZD9O00144 591 aa10.08□□□□□ -0.8
CDH13-208ENST00000566333 APBB1O00213 710 aa10.08□□□□□ -0.8
CDH13-208ENST00000566333 SMARCA5O60264 1052 aaPredicted RBP10.08□□□□□ -0.8
CDH13-208ENST00000566333 ECE2O60344 883 aa10.08□□□□□ -0.8
CDH13-208ENST00000566333 RAB11FIP3O75154 756 aa10.08□□□□□ -0.8
CDH13-208ENST00000566333 NEFLP07196 543 aa10.08□□□□□ -0.8
CDH13-208ENST00000566333 SLC5A1P13866 664 aa10.08□□□□□ -0.8
CDH13-208ENST00000566333 GYG1P46976 350 aa10.08□□□□□ -0.8
CDH13-208ENST00000566333 EAF2Q96CJ1 260 aaPredicted RBP10.08□□□□□ -0.8
CDH13-208ENST00000566333 KIF1BPQ96EK5 621 aa10.08□□□□□ -0.8
CDH13-208ENST00000566333 FAM84BQ96KN1 310 aaPredicted RBP10.08□□□□□ -0.8
CDH13-208ENST00000566333 IL1RAPL2Q9NP60 686 aa10.08□□□□□ -0.8
CDH13-208ENST00000566333 DBNLQ9UJU6 430 aaKnown RBP10.08□□□□□ -0.8
CDH13-208ENST00000566333 CDK5RAP2Q96SN8 1893 aa10.08□□□□□ -0.8
CDH13-208ENST00000566333 DCAF8L1A6NGE4 600 aa10.07□□□□□ -0.8
CDH13-208ENST00000566333 IFIT1P09914 478 aaKnown RBP10.07□□□□□ -0.8
CDH13-208ENST00000566333 IL1R1P14778 569 aa10.07□□□□□ -0.8
CDH13-208ENST00000566333 PHKA1P46020 1223 aa10.07□□□□□ -0.8
CDH13-208ENST00000566333 TIMM10P62072 90 aa10.07□□□□□ -0.8
CDH13-208ENST00000566333 DOK7Q18PE1 504 aa10.07□□□□□ -0.8
CDH13-208ENST00000566333 FBXO33Q7Z6M2 555 aa10.07□□□□□ -0.8
CDH13-208ENST00000566333 NIM1KQ8IY84 436 aa10.07□□□□□ -0.8
CDH13-208ENST00000566333 XAGE2Q96GT9 111 aa10.07□□□□□ -0.8
CDH13-208ENST00000566333 DBNDD2Q9BQY9 259 aa10.07□□□□□ -0.8
CDH13-208ENST00000566333 LRRCC1Q9C099 1032 aa10.07□□□□□ -0.8
CDH13-208ENST00000566333 ZC3H12CQ9C0D7 883 aaKnown RBP10.07□□□□□ -0.8
CDH13-208ENST00000566333 COA1Q9GZY4 146 aa10.07□□□□□ -0.8
CDH13-208ENST00000566333 KCNQ5Q9NR82 932 aa10.07□□□□□ -0.8
CDH13-208ENST00000566333 AKAP2Q9Y2D5 859 aa10.07□□□□□ -0.8
CDH13-208ENST00000566333 SALL3Q9BXA9 1300 aa10.07□□□□□ -0.8
CDH13-208ENST00000566333 ZBTB22O15209 634 aa10.06□□□□□ -0.8
CDH13-208ENST00000566333 BCAMP50895 628 aa10.06□□□□□ -0.8
CDH13-208ENST00000566333 ZNF804AQ7Z570 1209 aa10.06□□□□□ -0.8
CDH13-208ENST00000566333 AACSQ86V21 672 aa10.06□□□□□ -0.8
CDH13-208ENST00000566333 GCC1Q96CN9 775 aa10.06□□□□□ -0.8
CDH13-208ENST00000566333 RWDD1Q9H446 243 aaPredicted RBP10.06□□□□□ -0.8
CDH13-208ENST00000566333 CD209Q9NNX6 404 aa10.06□□□□□ -0.8
CDH13-208ENST00000566333 ZNRF3Q9ULT6 936 aa10.06□□□□□ -0.8
CDH13-208ENST00000566333 FOCADQ5VW36 1801 aa10.05□□□□□ -0.8
CDH13-208ENST00000566333 ARID4AP29374 1257 aaPredicted RBP10.05□□□□□ -0.8
CDH13-208ENST00000566333 HIBADHP31937 336 aaKnown RBP10.05□□□□□ -0.8
CDH13-208ENST00000566333 CXCL9Q07325 125 aa10.05□□□□□ -0.8
CDH13-208ENST00000566333 RASGRF1Q13972 1273 aa10.05□□□□□ -0.8
CDH13-208ENST00000566333 SCARF1Q14162 830 aa10.05□□□□□ -0.8
CDH13-208ENST00000566333 CCDC102BQ68D86 513 aa10.05□□□□□ -0.8
CDH13-208ENST00000566333 PODNQ7Z5L7 613 aa10.05□□□□□ -0.8
CDH13-208ENST00000566333 TDRD7Q8NHU6 1098 aaKnown RBP10.05□□□□□ -0.8
CDH13-208ENST00000566333 OTUD7AQ8TE49 926 aaPredicted RBP10.05□□□□□ -0.8
CDH13-208ENST00000566333 JDP2Q8WYK2 163 aa10.05□□□□□ -0.8
CDH13-208ENST00000566333 CCDC8Q9H0W5 538 aaPredicted RBP10.05□□□□□ -0.8
CDH13-208ENST00000566333 PDS5AQ29RF7 1337 aaKnown RBP10.05□□□□□ -0.8
CDH13-208ENST00000566333 FAM205AQ6ZU69 1335 aa10.05□□□□□ -0.8
CDH13-208ENST00000566333 PSMD14O00487 310 aa10.04□□□□□ -0.8
CDH13-208ENST00000566333 RAD17O75943 681 aa10.04□□□□□ -0.8
CDH13-208ENST00000566333 CAVIN4Q5BKX8 364 aa10.04□□□□□ -0.8
CDH13-208ENST00000566333 DACT2Q5SW24 774 aa10.04□□□□□ -0.8
CDH13-208ENST00000566333 ERICH6BQ5W0A0 696 aa10.04□□□□□ -0.8
CDH13-208ENST00000566333 PI16Q6UXB8 463 aa10.04□□□□□ -0.8
CDH13-208ENST00000566333 CLASRPQ8N2M8 674 aaKnown RBP10.04□□□□□ -0.8
CDH13-208ENST00000566333 CERS5Q8N5B7 392 aa10.04□□□□□ -0.8
CDH13-208ENST00000566333 NEUROD6Q96NK8 337 aa10.04□□□□□ -0.8
CDH13-208ENST00000566333 IQSEC3Q9UPP2 1182 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms