RNA–Protein interactions for RNA: ENST00000564814.1

GINS3-205, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-205ENST00000564814 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.2□□□□□ -0.94
GINS3-205ENST00000564814 AKAP11Q9UKA4 1901 aa9.2□□□□□ -0.94
GINS3-205ENST00000564814 PDS5AQ29RF7 1337 aaKnown RBP9.2□□□□□ -0.94
GINS3-205ENST00000564814 A0A1B0GUL7 405 aa9.19□□□□□ -0.94
GINS3-205ENST00000564814 PPEF1O14829 653 aaPredicted RBP9.19□□□□□ -0.94
GINS3-205ENST00000564814 MX1P20591 662 aa9.19□□□□□ -0.94
GINS3-205ENST00000564814 ATP2B4P23634 1241 aa9.19□□□□□ -0.94
GINS3-205ENST00000564814 PDE1AP54750 535 aa9.19□□□□□ -0.94
GINS3-205ENST00000564814 PRPF40BQ6NWY9 871 aaKnown RBP9.19□□□□□ -0.94
GINS3-205ENST00000564814 TTLL6Q8N841 843 aa9.19□□□□□ -0.94
GINS3-205ENST00000564814 CCDC85AQ96PX6 553 aaPredicted RBP9.19□□□□□ -0.94
GINS3-205ENST00000564814 DBNLQ9UJU6 430 aaKnown RBP9.19□□□□□ -0.94
GINS3-205ENST00000564814 MED23Q9ULK4 1368 aa9.19□□□□□ -0.94
GINS3-205ENST00000564814 ERC2O15083 957 aa9.18□□□□□ -0.94
GINS3-205ENST00000564814 GLRX3O76003 335 aaKnown RBP9.18□□□□□ -0.94
GINS3-205ENST00000564814 IFIT1P09914 478 aaKnown RBP9.18□□□□□ -0.94
GINS3-205ENST00000564814 ATP5JP18859 108 aa9.18□□□□□ -0.94
GINS3-205ENST00000564814 ARID4AP29374 1257 aaPredicted RBP9.18□□□□□ -0.94
GINS3-205ENST00000564814 PSME4Q14997 1843 aa9.18□□□□□ -0.94
GINS3-205ENST00000564814 ATP2B3Q16720 1220 aa9.18□□□□□ -0.94
GINS3-205ENST00000564814 RFX7Q2KHR2 1363 aa9.18□□□□□ -0.94
GINS3-205ENST00000564814 BMP2KLQ5H9B9 411 aa9.18□□□□□ -0.94
GINS3-205ENST00000564814 TMED8Q6PL24 325 aaPredicted RBP9.18□□□□□ -0.94
GINS3-205ENST00000564814 PI4K2BQ8TCG2 481 aa9.18□□□□□ -0.94
GINS3-205ENST00000564814 GPATCH3Q96I76 525 aa9.18□□□□□ -0.94
GINS3-205ENST00000564814 PSMD1Q99460 953 aa9.18□□□□□ -0.94
GINS3-205ENST00000564814 IL1RAPL2Q9NP60 686 aa9.18□□□□□ -0.94
GINS3-205ENST00000564814 LTBP3Q9NS15 1303 aa9.18□□□□□ -0.94
GINS3-205ENST00000564814 PIM2Q9P1W9 311 aa9.18□□□□□ -0.94
GINS3-205ENST00000564814 DOCK2Q92608 1830 aa9.17□□□□□ -0.94
GINS3-205ENST00000564814 SEMA3EO15041 775 aa9.17□□□□□ -0.94
GINS3-205ENST00000564814 SMARCA5O60264 1052 aaPredicted RBP9.17□□□□□ -0.94
GINS3-205ENST00000564814 IFIT2P09913 472 aaKnown RBP9.17□□□□□ -0.94
GINS3-205ENST00000564814 SLC5A1P13866 664 aa9.17□□□□□ -0.94
GINS3-205ENST00000564814 DPEP1P16444 411 aa9.17□□□□□ -0.94
GINS3-205ENST00000564814 CHRNA5P30532 468 aa9.17□□□□□ -0.94
GINS3-205ENST00000564814 AACSQ86V21 672 aa9.17□□□□□ -0.94
GINS3-205ENST00000564814 RTKN2Q8IZC4 609 aa9.17□□□□□ -0.94
GINS3-205ENST00000564814 ECHDC1Q9NTX5 307 aa9.17□□□□□ -0.94
GINS3-205ENST00000564814 MYH13Q9UKX3 1938 aa9.17□□□□□ -0.94
GINS3-205ENST00000564814 UQCRFS1P1P0C7P4 283 aa9.16□□□□□ -0.94
GINS3-205ENST00000564814 CCDC93Q567U6 631 aa9.16□□□□□ -0.94
GINS3-205ENST00000564814 FBXO33Q7Z6M2 555 aa9.16□□□□□ -0.94
GINS3-205ENST00000564814 ZNF526Q8TF50 670 aaPredicted RBP9.16□□□□□ -0.94
GINS3-205ENST00000564814 ZNF622Q969S3 477 aaKnown RBP eCLIP9.16□□□□□ -0.94
GINS3-205ENST00000564814 XAGE2Q96GT9 111 aa9.16□□□□□ -0.94
GINS3-205ENST00000564814 DBNDD2Q9BQY9 259 aa9.16□□□□□ -0.94
GINS3-205ENST00000564814 GGA1Q9UJY5 639 aa9.16□□□□□ -0.94
GINS3-205ENST00000564814 ZNF646O15015 1829 aaPredicted RBP9.16□□□□□ -0.94
GINS3-205ENST00000564814 AK9Q5TCS8 1911 aa9.15□□□□□ -0.94
GINS3-205ENST00000564814 TIMM10P62072 90 aa9.15□□□□□ -0.94
GINS3-205ENST00000564814 GPSM2P81274 684 aa9.15□□□□□ -0.94
GINS3-205ENST00000564814 CCDC158Q5M9N0 1113 aa9.15□□□□□ -0.94
GINS3-205ENST00000564814 TTC22Q5TAA0 569 aa9.15□□□□□ -0.94
GINS3-205ENST00000564814 CCDC102BQ68D86 513 aa9.15□□□□□ -0.94
GINS3-205ENST00000564814 C16orf71Q8IYS4 520 aaPredicted RBP9.15□□□□□ -0.94
GINS3-205ENST00000564814 MPNDQ8N594 471 aa9.15□□□□□ -0.94
GINS3-205ENST00000564814 SUPT20HQ8NEM7 779 aa9.15□□□□□ -0.94
GINS3-205ENST00000564814 TBC1D16Q8TBP0 767 aa9.15□□□□□ -0.94
GINS3-205ENST00000564814 OTUD7AQ8TE49 926 aaPredicted RBP9.15□□□□□ -0.94
GINS3-205ENST00000564814 HAUS7Q99871 368 aa9.15□□□□□ -0.94
GINS3-205ENST00000564814 TMX4Q9H1E5 349 aaPredicted RBP9.15□□□□□ -0.94
GINS3-205ENST00000564814 MYH7P12883 1935 aa9.15□□□□□ -0.95
GINS3-205ENST00000564814 PCNTO95613 3336 aa9.15□□□□□ -0.95
GINS3-205ENST00000564814 SALL1Q9NSC2 1324 aa9.14□□□□□ -0.95
GINS3-205ENST00000564814 DICER1Q9UPY3 1922 aaKnown RBP9.14□□□□□ -0.95
GINS3-205ENST00000564814 A0A0G2JLW4 131 aa9.14□□□□□ -0.95
GINS3-205ENST00000564814 TAF5LO75529 589 aa9.14□□□□□ -0.95
GINS3-205ENST00000564814 IL1R1P14778 569 aa9.14□□□□□ -0.95
GINS3-205ENST00000564814 GSPT1P15170 499 aaKnown RBP9.14□□□□□ -0.95
GINS3-205ENST00000564814 CAVIN4Q5BKX8 364 aa9.14□□□□□ -0.95
GINS3-205ENST00000564814 DALRD3Q5D0E6 543 aaKnown RBP9.14□□□□□ -0.95
GINS3-205ENST00000564814 TDRD7Q8NHU6 1098 aaKnown RBP9.14□□□□□ -0.95
GINS3-205ENST00000564814 FAM84BQ96KN1 310 aaPredicted RBP9.14□□□□□ -0.95
GINS3-205ENST00000564814 EYA3Q99504 573 aa9.14□□□□□ -0.95
GINS3-205ENST00000564814 COA1Q9GZY4 146 aa9.14□□□□□ -0.95
GINS3-205ENST00000564814 CCDC8Q9H0W5 538 aaPredicted RBP9.14□□□□□ -0.95
GINS3-205ENST00000564814 TLR7Q9NYK1 1049 aaKnown RBP9.14□□□□□ -0.95
GINS3-205ENST00000564814 ANKIB1Q9P2G1 1089 aa9.14□□□□□ -0.95
GINS3-205ENST00000564814 POLLQ9UGP5 575 aa9.14□□□□□ -0.95
GINS3-205ENST00000564814 NSFL1CQ9UNZ2 370 aaKnown RBP9.14□□□□□ -0.95
GINS3-205ENST00000564814 FAM205AQ6ZU69 1335 aa9.13□□□□□ -0.95
GINS3-205ENST00000564814 APBB1O00213 710 aa9.13□□□□□ -0.95
GINS3-205ENST00000564814 FKBP1AP62942 108 aaKnown RBP9.13□□□□□ -0.95
GINS3-205ENST00000564814 FKBP4Q02790 459 aaKnown RBP eCLIP9.13□□□□□ -0.95
GINS3-205ENST00000564814 KIAA2012Q0VF49 1180 aa9.13□□□□□ -0.95
GINS3-205ENST00000564814 DPP8Q6V1X1 898 aaPredicted RBP9.13□□□□□ -0.95
GINS3-205ENST00000564814 PODNQ7Z5L7 613 aa9.13□□□□□ -0.95
GINS3-205ENST00000564814 HELBQ8NG08 1087 aaPredicted RBP9.13□□□□□ -0.95
GINS3-205ENST00000564814 GPBP1L1Q9HC44 474 aaPredicted RBP9.13□□□□□ -0.95
GINS3-205ENST00000564814 MAST2Q6P0Q8 1798 aa9.13□□□□□ -0.95
GINS3-205ENST00000564814 WDR90Q96KV7 1748 aa9.12□□□□□ -0.95
GINS3-205ENST00000564814 EPB41L2O43491 1005 aaKnown RBP9.12□□□□□ -0.95
GINS3-205ENST00000564814 EIF5BO60841 1220 aaKnown RBP9.12□□□□□ -0.95
GINS3-205ENST00000564814 UFL1O94874 794 aa9.12□□□□□ -0.95
GINS3-205ENST00000564814 ADORA1P30542 326 aa9.12□□□□□ -0.95
GINS3-205ENST00000564814 HIBADHP31937 336 aaKnown RBP9.12□□□□□ -0.95
GINS3-205ENST00000564814 MCAMP43121 646 aa9.12□□□□□ -0.95
GINS3-205ENST00000564814 PHKA1P46020 1223 aa9.12□□□□□ -0.95
GINS3-205ENST00000564814 KCNJ4P48050 445 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms