RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 ATG9AQ7Z3C6 839 aa19.8■□□□□ 0.76
RAB40C-208ENST00000564703 ZNF804AQ7Z570 1209 aa19.8■□□□□ 0.76
RAB40C-208ENST00000564703 RRAGCQ9HB90 399 aa19.8■□□□□ 0.76
RAB40C-208ENST00000564703 ZNF541Q9H0D2 1346 aa19.79■□□□□ 0.76
RAB40C-208ENST00000564703 VEGFAP15692 232 aaPredicted RBP19.79■□□□□ 0.76
RAB40C-208ENST00000564703 PUM3Q15397 648 aaKnown RBP19.79■□□□□ 0.76
RAB40C-208ENST00000564703 VPS37DQ86XT2 251 aa19.79■□□□□ 0.76
RAB40C-208ENST00000564703 AKAP2Q9Y2D5 859 aa19.79■□□□□ 0.76
RAB40C-208ENST00000564703 DUOX1Q9NRD9 1551 aa19.78■□□□□ 0.76
RAB40C-208ENST00000564703 SLC5A1P13866 664 aa19.78■□□□□ 0.76
RAB40C-208ENST00000564703 TXNRD3Q86VQ6 643 aa19.78■□□□□ 0.76
RAB40C-208ENST00000564703 C16orf71Q8IYS4 520 aaPredicted RBP19.78■□□□□ 0.76
RAB40C-208ENST00000564703 TIAM2Q8IVF5 1701 aa19.78■□□□□ 0.76
RAB40C-208ENST00000564703 LTBP1Q14766 1721 aa19.77■□□□□ 0.76
RAB40C-208ENST00000564703 IQCA1LA6NCM1 817 aa19.77■□□□□ 0.76
RAB40C-208ENST00000564703 YDJCA8MPS7 323 aa19.77■□□□□ 0.76
RAB40C-208ENST00000564703 LMOD1P29536 600 aaPredicted RBP19.77■□□□□ 0.76
RAB40C-208ENST00000564703 HIBADHP31937 336 aaKnown RBP19.77■□□□□ 0.76
RAB40C-208ENST00000564703 HSP90AB4PQ58FF6 505 aa19.77■□□□□ 0.76
RAB40C-208ENST00000564703 LPIN2Q92539 896 aa19.77■□□□□ 0.76
RAB40C-208ENST00000564703 KLRK1P26718 216 aa19.76■□□□□ 0.75
RAB40C-208ENST00000564703 ATP2B3Q16720 1220 aa19.76■□□□□ 0.75
RAB40C-208ENST00000564703 VGLL2Q8N8G2 317 aa19.76■□□□□ 0.75
RAB40C-208ENST00000564703 FBXW7Q969H0 707 aa19.76■□□□□ 0.75
RAB40C-208ENST00000564703 CRBNQ96SW2 442 aa19.76■□□□□ 0.75
RAB40C-208ENST00000564703 CD209Q9NNX6 404 aa19.76■□□□□ 0.75
RAB40C-208ENST00000564703 NMRK2Q9NPI5 230 aa19.76■□□□□ 0.75
RAB40C-208ENST00000564703 USP17L3A6NCW0 530 aa19.75■□□□□ 0.75
RAB40C-208ENST00000564703 USP17L4A6NCW7 530 aa19.75■□□□□ 0.75
RAB40C-208ENST00000564703 FRAT2O75474 233 aaPredicted RBP19.75■□□□□ 0.75
RAB40C-208ENST00000564703 TFCP2Q12800 502 aa19.75■□□□□ 0.75
RAB40C-208ENST00000564703 USP17L1Q7RTZ2 530 aa19.75■□□□□ 0.75
RAB40C-208ENST00000564703 KCNQ5Q9NR82 932 aa19.75■□□□□ 0.75
RAB40C-208ENST00000564703 NOP58Q9Y2X3 529 aaKnown RBP19.75■□□□□ 0.75
RAB40C-208ENST00000564703 COL4A5P29400 1685 aa19.75■□□□□ 0.75
RAB40C-208ENST00000564703 PSMD14O00487 310 aa19.74■□□□□ 0.75
RAB40C-208ENST00000564703 GYG1P46976 350 aa19.74■□□□□ 0.75
RAB40C-208ENST00000564703 AAMPQ13685 434 aa19.74■□□□□ 0.75
RAB40C-208ENST00000564703 TTLL5Q6EMB2 1281 aa19.74■□□□□ 0.75
RAB40C-208ENST00000564703 ERC1Q8IUD2 1116 aa19.74■□□□□ 0.75
RAB40C-208ENST00000564703 L3MBTL3Q96JM7 780 aaPredicted RBP19.74■□□□□ 0.75
RAB40C-208ENST00000564703 FAM84BQ96KN1 310 aaPredicted RBP19.74■□□□□ 0.75
RAB40C-208ENST00000564703 NEUROD6Q96NK8 337 aa19.74■□□□□ 0.75
RAB40C-208ENST00000564703 HACL1Q9UJ83 578 aa19.74■□□□□ 0.75
RAB40C-208ENST00000564703 VIL1P09327 827 aaKnown RBP19.73■□□□□ 0.75
RAB40C-208ENST00000564703 FGFR2P21802 821 aa19.73■□□□□ 0.75
RAB40C-208ENST00000564703 IL1R1P14778 569 aa19.72■□□□□ 0.75
RAB40C-208ENST00000564703 RPS12P25398 132 aaKnown RBP19.72■□□□□ 0.75
RAB40C-208ENST00000564703 GMPSP49915 693 aaPredicted RBP19.72■□□□□ 0.75
RAB40C-208ENST00000564703 TIMM10P62072 90 aa19.72■□□□□ 0.75
RAB40C-208ENST00000564703 GTF2IP78347 998 aa19.72■□□□□ 0.75
RAB40C-208ENST00000564703 STRIP1Q5VSL9 837 aa19.72■□□□□ 0.75
RAB40C-208ENST00000564703 GNL3LQ9NVN8 582 aaKnown RBP19.72■□□□□ 0.75
RAB40C-208ENST00000564703 H7C1D1 291 aa19.71■□□□□ 0.75
RAB40C-208ENST00000564703 SASH1O94885 1247 aa19.71■□□□□ 0.75
RAB40C-208ENST00000564703 BCAMP50895 628 aa19.71■□□□□ 0.75
RAB40C-208ENST00000564703 GORABQ5T7V8 394 aa19.71■□□□□ 0.75
RAB40C-208ENST00000564703 FBXO33Q7Z6M2 555 aa19.71■□□□□ 0.75
RAB40C-208ENST00000564703 DPF2Q92785 391 aa19.71■□□□□ 0.75
RAB40C-208ENST00000564703 EXOC6BQ9Y2D4 811 aa19.71■□□□□ 0.75
RAB40C-208ENST00000564703 ZBTB12Q9Y330 459 aaPredicted RBP19.71■□□□□ 0.75
RAB40C-208ENST00000564703 A0A1B0GUL7 405 aa19.7■□□□□ 0.74
RAB40C-208ENST00000564703 POTECB2RU33 542 aa19.7■□□□□ 0.74
RAB40C-208ENST00000564703 RSBN1LQ6PCB5 846 aaPredicted RBP19.7■□□□□ 0.74
RAB40C-208ENST00000564703 SIRT2Q8IXJ6 389 aa19.7■□□□□ 0.74
RAB40C-208ENST00000564703 AGBL3Q8NEM8 1001 aa19.7■□□□□ 0.74
RAB40C-208ENST00000564703 TDRD7Q8NHU6 1098 aaKnown RBP19.7■□□□□ 0.74
RAB40C-208ENST00000564703 CNOT7Q9UIV1 285 aaKnown RBP19.7■□□□□ 0.74
RAB40C-208ENST00000564703 IRS2Q9Y4H2 1338 aa19.7■□□□□ 0.74
RAB40C-208ENST00000564703 KIF3CO14782 793 aa19.69■□□□□ 0.74
RAB40C-208ENST00000564703 RAB11FIP3O75154 756 aa19.69■□□□□ 0.74
RAB40C-208ENST00000564703 EPHX2P34913 555 aa19.69■□□□□ 0.74
RAB40C-208ENST00000564703 PNMA8AQ86V59 439 aaPredicted RBP19.69■□□□□ 0.74
RAB40C-208ENST00000564703 GPR108Q9NPR9 543 aa19.69■□□□□ 0.74
RAB40C-208ENST00000564703 GPRC5DQ9NZD1 345 aa19.69■□□□□ 0.74
RAB40C-208ENST00000564703 A0A1B0GUL6 1792 aa19.68■□□□□ 0.74
RAB40C-208ENST00000564703 APBB1O00213 710 aa19.68■□□□□ 0.74
RAB40C-208ENST00000564703 EPS15P42566 896 aa19.68■□□□□ 0.74
RAB40C-208ENST00000564703 SCNN1DP51172 638 aa19.68■□□□□ 0.74
RAB40C-208ENST00000564703 OGFOD1Q8N543 542 aa19.68■□□□□ 0.74
RAB40C-208ENST00000564703 TAF1DQ9H5J8 278 aaPredicted RBP19.68■□□□□ 0.74
RAB40C-208ENST00000564703 MYO3BQ8WXR4 1341 aa19.68■□□□□ 0.74
RAB40C-208ENST00000564703 WDR90Q96KV7 1748 aa19.68■□□□□ 0.74
RAB40C-208ENST00000564703 TOMM70O94826 608 aa19.67■□□□□ 0.74
RAB40C-208ENST00000564703 CENPBP07199 599 aaPredicted RBP19.67■□□□□ 0.74
RAB40C-208ENST00000564703 EAPPQ56P03 285 aaPredicted RBP19.67■□□□□ 0.74
RAB40C-208ENST00000564703 DACT2Q5SW24 774 aa19.67■□□□□ 0.74
RAB40C-208ENST00000564703 XAGE2Q96GT9 111 aa19.67■□□□□ 0.74
RAB40C-208ENST00000564703 ADARB2Q9NS39 739 aaKnown RBP19.67■□□□□ 0.74
RAB40C-208ENST00000564703 IQSEC3Q9UPP2 1182 aaPredicted RBP19.67■□□□□ 0.74
RAB40C-208ENST00000564703 CLEC11AQ9Y240 323 aa19.67■□□□□ 0.74
RAB40C-208ENST00000564703 USP17L8P0C7I0 530 aa19.66■□□□□ 0.74
RAB40C-208ENST00000564703 CHAF1AQ13111 956 aaPredicted RBP19.66■□□□□ 0.74
RAB40C-208ENST00000564703 TNNI3KQ59H18 835 aa19.66■□□□□ 0.74
RAB40C-208ENST00000564703 MICALL2Q8IY33 904 aa19.66■□□□□ 0.74
RAB40C-208ENST00000564703 EXOC6Q8TAG9 804 aa19.66■□□□□ 0.74
RAB40C-208ENST00000564703 KIF1BPQ96EK5 621 aa19.66■□□□□ 0.74
RAB40C-208ENST00000564703 HDAC9Q9UKV0 1011 aa19.66■□□□□ 0.74
RAB40C-208ENST00000564703 PCDHB15Q9Y5E8 787 aa19.66■□□□□ 0.74
RAB40C-208ENST00000564703 FPGT-TNNI3KV9GXZ4 949 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms