RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 GREM1O60565 184 aa3.92□□□□□ -1.78
CHD9-209ENST00000564255 STK10O94804 968 aaKnown RBP3.92□□□□□ -1.78
CHD9-209ENST00000564255 NFKB1P19838 968 aa3.92□□□□□ -1.78
CHD9-209ENST00000564255 NRLP54845 237 aa3.92□□□□□ -1.78
CHD9-209ENST00000564255 SPEM2Q0P670 501 aa3.92□□□□□ -1.78
CHD9-209ENST00000564255 PHC3Q8NDX5 983 aa3.92□□□□□ -1.78
CHD9-209ENST00000564255 SPON2Q9BUD6 331 aa3.92□□□□□ -1.78
CHD9-209ENST00000564255 PIF1Q9H611 641 aa3.92□□□□□ -1.78
CHD9-209ENST00000564255 ATP13A2Q9NQ11 1180 aa3.92□□□□□ -1.78
CHD9-209ENST00000564255 DZANK1Q9NVP4 752 aa3.92□□□□□ -1.78
CHD9-209ENST00000564255 DCDC2BA2VCK2 349 aa3.92□□□□□ -1.78
CHD9-209ENST00000564255 HMGB1P09429 215 aaKnown RBP3.92□□□□□ -1.78
CHD9-209ENST00000564255 HSP90B1P14625 803 aaKnown RBP3.92□□□□□ -1.78
CHD9-209ENST00000564255 EIF4A3P38919 411 aaKnown RBP3.92□□□□□ -1.78
CHD9-209ENST00000564255 GRIA4P48058 902 aa3.92□□□□□ -1.78
CHD9-209ENST00000564255 SOX9P48436 509 aa3.92□□□□□ -1.78
CHD9-209ENST00000564255 LIG3P49916 1009 aa3.92□□□□□ -1.78
CHD9-209ENST00000564255 PTSQ03393 145 aa3.92□□□□□ -1.78
CHD9-209ENST00000564255 CCDC85BQ15834 202 aaPredicted RBP3.92□□□□□ -1.78
CHD9-209ENST00000564255 DHX32Q7L7V1 743 aaKnown RBP3.92□□□□□ -1.78
CHD9-209ENST00000564255 NXPE3Q969Y0 559 aa3.92□□□□□ -1.78
CHD9-209ENST00000564255 TLDC2A0PJX2 215 aa3.91□□□□□ -1.78
CHD9-209ENST00000564255 ZBTB42B2RXF5 422 aa3.91□□□□□ -1.78
CHD9-209ENST00000564255 GFRA3O60609 400 aa3.91□□□□□ -1.78
CHD9-209ENST00000564255 GBP2P32456 591 aaPredicted RBP3.91□□□□□ -1.78
CHD9-209ENST00000564255 LMNB2Q03252 620 aa3.91□□□□□ -1.78
CHD9-209ENST00000564255 CCDC155Q8N6L0 562 aa3.91□□□□□ -1.78
CHD9-209ENST00000564255 PMFBP1Q8TBY8 1022 aa3.91□□□□□ -1.78
CHD9-209ENST00000564255 ZNF296Q8WUU4 475 aaPredicted RBP3.91□□□□□ -1.78
CHD9-209ENST00000564255 NECAB3Q96P71 396 aaPredicted RBP3.91□□□□□ -1.78
CHD9-209ENST00000564255 PNMA5Q96PV4 448 aa3.91□□□□□ -1.78
CHD9-209ENST00000564255 CEP44Q9C0F1 390 aa3.91□□□□□ -1.78
CHD9-209ENST00000564255 OSBPL2Q9H1P3 480 aa3.91□□□□□ -1.78
CHD9-209ENST00000564255 ATXN7L1Q9ULK2 861 aaPredicted RBP3.91□□□□□ -1.78
CHD9-209ENST00000564255 AKAP2Q9Y2D5 859 aa3.91□□□□□ -1.78
CHD9-209ENST00000564255 RPS26P62854 115 aaKnown RBP3.91□□□□□ -1.78
CHD9-209ENST00000564255 GPLD1P80108 840 aa3.91□□□□□ -1.78
CHD9-209ENST00000564255 SERINC3Q13530 473 aa3.91□□□□□ -1.78
CHD9-209ENST00000564255 COL9A2Q14055 689 aaPredicted RBP3.91□□□□□ -1.78
CHD9-209ENST00000564255 RIPOR1Q6ZS17 1223 aa3.91□□□□□ -1.78
CHD9-209ENST00000564255 TRPM4Q8TD43 1214 aa3.91□□□□□ -1.78
CHD9-209ENST00000564255 MKL1Q969V6 931 aa3.91□□□□□ -1.78
CHD9-209ENST00000564255 ZNF576Q9H609 170 aa3.91□□□□□ -1.78
CHD9-209ENST00000564255 AAASQ9NRG9 546 aa3.91□□□□□ -1.78
CHD9-209ENST00000564255 STRIP2Q9ULQ0 834 aa3.91□□□□□ -1.78
CHD9-209ENST00000564255 MINDY4BA8MYZ0 360 aa3.9□□□□□ -1.78
CHD9-209ENST00000564255 MAN1A2O60476 641 aa3.9□□□□□ -1.78
CHD9-209ENST00000564255 CELA3AP09093 270 aa3.9□□□□□ -1.78
CHD9-209ENST00000564255 NBPF6Q5VWK0 638 aa3.9□□□□□ -1.78
CHD9-209ENST00000564255 FBXL19Q6PCT2 694 aa3.9□□□□□ -1.78
CHD9-209ENST00000564255 NCAPG2Q86XI2 1143 aa3.9□□□□□ -1.78
CHD9-209ENST00000564255 ZNF837Q96EG3 531 aaPredicted RBP3.9□□□□□ -1.78
CHD9-209ENST00000564255 ABHD17AQ96GS6 310 aa3.9□□□□□ -1.78
CHD9-209ENST00000564255 NBPF4Q96M43 638 aa3.9□□□□□ -1.78
CHD9-209ENST00000564255 IRX2Q9BZI1 471 aaPredicted RBP3.9□□□□□ -1.78
CHD9-209ENST00000564255 SEC31BQ9NQW1 1179 aa3.9□□□□□ -1.78
CHD9-209ENST00000564255 GINM1Q9NU53 330 aa3.9□□□□□ -1.78
CHD9-209ENST00000564255 TBX22Q9Y458 520 aa3.9□□□□□ -1.78
CHD9-209ENST00000564255 A0A096LPE4 126 aa3.9□□□□□ -1.79
CHD9-209ENST00000564255 A0A1W2PPZ6 126 aa3.9□□□□□ -1.79
CHD9-209ENST00000564255 ENC1O14682 589 aa3.9□□□□□ -1.79
CHD9-209ENST00000564255 PF4P02776 101 aa3.9□□□□□ -1.79
CHD9-209ENST00000564255 CD33P20138 364 aa3.9□□□□□ -1.79
CHD9-209ENST00000564255 SPRED3Q2MJR0 410 aa3.9□□□□□ -1.79
CHD9-209ENST00000564255 PKDCCQ504Y2 493 aa3.9□□□□□ -1.79
CHD9-209ENST00000564255 ZNF746Q6NUN9 644 aaPredicted RBP3.9□□□□□ -1.79
CHD9-209ENST00000564255 AGMOQ6ZNB7 445 aa3.9□□□□□ -1.79
CHD9-209ENST00000564255 BHMTQ93088 406 aa3.9□□□□□ -1.79
CHD9-209ENST00000564255 LOC102724428A0A0B4J2F2 783 aa3.89□□□□□ -1.79
CHD9-209ENST00000564255 SOBPA7XYQ1 873 aa3.89□□□□□ -1.79
CHD9-209ENST00000564255 TRPA1O75762 1119 aa3.89□□□□□ -1.79
CHD9-209ENST00000564255 TFE3P19532 575 aaPredicted RBP3.89□□□□□ -1.79
CHD9-209ENST00000564255 FGFR3P22607 806 aa3.89□□□□□ -1.79
CHD9-209ENST00000564255 NASPP49321 788 aaPredicted RBP3.89□□□□□ -1.79
CHD9-209ENST00000564255 SIK1P57059 783 aa3.89□□□□□ -1.79
CHD9-209ENST00000564255 FAAP100Q0VG06 881 aa3.89□□□□□ -1.79
CHD9-209ENST00000564255 TPTE2Q6XPS3 522 aa3.89□□□□□ -1.79
CHD9-209ENST00000564255 HHIPQ96QV1 700 aa3.89□□□□□ -1.79
CHD9-209ENST00000564255 LRRC3Q9BY71 257 aa3.89□□□□□ -1.79
CHD9-209ENST00000564255 PBX4Q9BYU1 374 aa3.89□□□□□ -1.79
CHD9-209ENST00000564255 SUPT16HQ9Y5B9 1047 aaKnown RBP3.89□□□□□ -1.79
CHD9-209ENST00000564255 ROBO2Q9HCK4 1378 aa3.89□□□□□ -1.79
CHD9-209ENST00000564255 PDE2AO00408 941 aaPredicted RBP3.89□□□□□ -1.79
CHD9-209ENST00000564255 NFX1Q12986 1120 aaKnown RBP3.89□□□□□ -1.79
CHD9-209ENST00000564255 CAMK2GQ13555 558 aaPredicted RBP3.89□□□□□ -1.79
CHD9-209ENST00000564255 CCDC84Q86UT8 332 aaPredicted RBP3.89□□□□□ -1.79
CHD9-209ENST00000564255 SLITRK4Q8IW52 837 aa3.89□□□□□ -1.79
CHD9-209ENST00000564255 KIFC2Q96AC6 838 aa3.89□□□□□ -1.79
CHD9-209ENST00000564255 RASSF4Q9H2L5 321 aa3.89□□□□□ -1.79
CHD9-209ENST00000564255 F6X3S4 739 aa3.88□□□□□ -1.79
CHD9-209ENST00000564255 MAP3K11Q16584 847 aa3.88□□□□□ -1.79
CHD9-209ENST00000564255 TLR6Q9Y2C9 796 aa3.88□□□□□ -1.79
CHD9-209ENST00000564255 TMA7Q9Y2S6 64 aaKnown RBP3.88□□□□□ -1.79
CHD9-209ENST00000564255 METTL12A8MUP2 240 aa3.88□□□□□ -1.79
CHD9-209ENST00000564255 KLF4O43474 513 aa3.88□□□□□ -1.79
CHD9-209ENST00000564255 FBXO24O75426 580 aa3.88□□□□□ -1.79
CHD9-209ENST00000564255 BMP6P22004 513 aa3.88□□□□□ -1.79
CHD9-209ENST00000564255 ITGA6P23229 1130 aa3.88□□□□□ -1.79
CHD9-209ENST00000564255 LAPTM4AQ15012 233 aa3.88□□□□□ -1.79
CHD9-209ENST00000564255 PCNX4Q63HM2 1172 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms